RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W DSE3Q08729 430 aa2.46□□□□□ -2.02
VPS52YDR484W HSP33Q08914 237 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W HSP32Q08992 237 aa2.46□□□□□ -2.02
VPS52YDR484W PCL6P40038 420 aa2.45□□□□□ -2.02
VPS52YDR484W VRG4P40107 337 aa2.45□□□□□ -2.02
VPS52YDR484W SLZ1P40167 298 aa2.45□□□□□ -2.02
VPS52YDR484W YFR020WP43600 232 aa2.45□□□□□ -2.02
VPS52YDR484W CBK1P53894 756 aa2.45□□□□□ -2.02
VPS52YDR484W ASI1P54074 624 aa2.45□□□□□ -2.02
VPS52YDR484W ARP10Q04549 284 aa2.45□□□□□ -2.02
VPS52YDR484W UTP21Q06078 939 aaPredicted RBP2.45□□□□□ -2.02
VPS52YDR484W MCP2Q06567 569 aa2.45□□□□□ -2.02
VPS52YDR484W YOL087CQ99247 1116 aa2.45□□□□□ -2.02
VPS52YDR484W SPE2P21182 396 aa2.44□□□□□ -2.02
VPS52YDR484W PRE8P23639 250 aa2.44□□□□□ -2.02
VPS52YDR484W ALY1P36117 915 aa2.44□□□□□ -2.02
VPS52YDR484W KTR3P38130 404 aaPredicted RBP2.44□□□□□ -2.02
VPS52YDR484W YJR061WP40355 935 aa2.44□□□□□ -2.02
VPS52YDR484W DPB11P47027 764 aaPredicted RBP2.44□□□□□ -2.02
VPS52YDR484W NNF2P53253 936 aa2.44□□□□□ -2.02
VPS52YDR484W YNR061CP53747 219 aa2.44□□□□□ -2.02
VPS52YDR484W INA17Q02888 182 aa2.44□□□□□ -2.02
VPS52YDR484W YLR281CQ05863 155 aa2.44□□□□□ -2.02
VPS52YDR484W SKG3Q06315 1026 aa2.44□□□□□ -2.02
VPS52YDR484W SNA4Q07549 140 aa2.44□□□□□ -2.02
VPS52YDR484W MLH2Q07980 695 aa2.44□□□□□ -2.02
VPS52YDR484W SRL1Q08673 210 aa2.44□□□□□ -2.02
VPS52YDR484W CIR2Q08822 631 aa2.44□□□□□ -2.02
VPS52YDR484W YLR112WQ12130 139 aa2.44□□□□□ -2.02
VPS52YDR484W FUM1P08417 488 aaKnown RBP2.44□□□□□ -2.02
VPS52YDR484W CLB2P24869 491 aa2.44□□□□□ -2.02
VPS52YDR484W YKL050CP35736 922 aa2.44□□□□□ -2.02
VPS52YDR484W UIP3P39547 235 aa2.44□□□□□ -2.02
VPS52YDR484W SEC24P40482 926 aaKnown RBP2.44□□□□□ -2.02
VPS52YDR484W AAD10P47182 288 aa2.44□□□□□ -2.02
VPS52YDR484W LSC1P53598 329 aaKnown RBP2.44□□□□□ -2.02
VPS52YDR484W YNL234WP53857 426 aa2.44□□□□□ -2.02
VPS52YDR484W YMR178WQ03219 274 aaKnown RBP2.44□□□□□ -2.02
VPS52YDR484W CTL1Q03220 320 aaKnown RBP2.44□□□□□ -2.02
VPS52YDR484W IZH1Q03419 316 aa2.44□□□□□ -2.02
VPS52YDR484W NUP53Q03790 475 aa2.44□□□□□ -2.02
VPS52YDR484W BUD7Q08754 746 aa2.44□□□□□ -2.02
VPS52YDR484W APL4Q12028 832 aa2.44□□□□□ -2.02
VPS52YDR484W SKM1Q12469 655 aa2.44□□□□□ -2.02
VPS52YDR484W CBP1P07252 654 aa2.43□□□□□ -2.02
VPS52YDR484W RPB8P20436 146 aa2.43□□□□□ -2.02
VPS52YDR484W MNN2P38069 597 aa2.43□□□□□ -2.02
VPS52YDR484W RFC1P38630 861 aaKnown RBP2.43□□□□□ -2.02
VPS52YDR484W DIA4P38705 446 aaPredicted RBP2.43□□□□□ -2.02
VPS52YDR484W YNG2P38806 282 aaKnown RBP2.43□□□□□ -2.02
VPS52YDR484W YIL152WP40455 235 aa2.43□□□□□ -2.02
VPS52YDR484W ARC1P46672 376 aaKnown RBP2.43□□□□□ -2.02
VPS52YDR484W PIL1P53252 339 aaKnown RBP2.43□□□□□ -2.02
VPS52YDR484W BSC5P53755 489 aa2.43□□□□□ -2.02
VPS52YDR484W YNL181WP53878 407 aa2.43□□□□□ -2.02
VPS52YDR484W ARP9Q05123 467 aa2.43□□□□□ -2.02
VPS52YDR484W INP53Q12271 1107 aa2.43□□□□□ -2.02
VPS52YDR484W RPL42AP0CX27 106 aaKnown RBP2.42□□□□□ -2.02
VPS52YDR484W RPL42BP0CX28 106 aaKnown RBP2.42□□□□□ -2.02
VPS52YDR484W CDC24P11433 854 aaPredicted RBP2.42□□□□□ -2.02
VPS52YDR484W PDB1P32473 366 aaKnown RBP2.42□□□□□ -2.02
VPS52YDR484W STV1P37296 890 aa2.42□□□□□ -2.02
VPS52YDR484W BUR6P40096 142 aa2.42□□□□□ -2.02
VPS52YDR484W SGF73P53165 657 aa2.42□□□□□ -2.02
VPS52YDR484W YTP1P53584 459 aa2.42□□□□□ -2.02
VPS52YDR484W GIS2P53849 153 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
VPS52YDR484W INN1P53901 409 aa2.42□□□□□ -2.02
VPS52YDR484W PSR1Q07800 427 aa2.42□□□□□ -2.02
VPS52YDR484W NKP1Q12493 238 aa2.42□□□□□ -2.02
VPS52YDR484W LCB1P25045 558 aaKnown RBP2.42□□□□□ -2.02
VPS52YDR484W GAC1P28006 793 aa2.42□□□□□ -2.02
VPS52YDR484W MIA40P36046 403 aa2.42□□□□□ -2.02
VPS52YDR484W AGP2P38090 596 aa2.42□□□□□ -2.02
VPS52YDR484W RKM3P38222 552 aa2.42□□□□□ -2.02
VPS52YDR484W ARC40P38328 384 aaKnown RBP2.42□□□□□ -2.02
VPS52YDR484W SIP4P46954 829 aa2.42□□□□□ -2.02
VPS52YDR484W YMR034CQ05131 434 aaPredicted RBP2.42□□□□□ -2.02
VPS52YDR484W TCO89Q08921 799 aa2.42□□□□□ -2.02
VPS52YDR484W ATG9Q12142 997 aa2.42□□□□□ -2.02
VPS52YDR484W YFL068WP0CX99 160 aa2.41□□□□□ -2.02
VPS52YDR484W YLL066W-AP0CY00 160 aa2.41□□□□□ -2.02
VPS52YDR484W YLL067W-AP0CY01 160 aa2.41□□□□□ -2.02
VPS52YDR484W VMA16P23968 213 aa2.41□□□□□ -2.02
VPS52YDR484W YCR043CP25361 127 aa2.41□□□□□ -2.02
VPS52YDR484W SNU114P36048 1008 aaKnown RBP2.41□□□□□ -2.02
VPS52YDR484W YPK3P38070 525 aa2.41□□□□□ -2.02
VPS52YDR484W LEU5P38702 357 aa2.41□□□□□ -2.02
VPS52YDR484W FMP10P40098 244 aa2.41□□□□□ -2.02
VPS52YDR484W YIL169CP40442 995 aa2.41□□□□□ -2.02
VPS52YDR484W IAH1P41734 238 aa2.41□□□□□ -2.02
VPS52YDR484W MEP3P53390 489 aa2.41□□□□□ -2.02
VPS52YDR484W ESBP6P53918 673 aa2.41□□□□□ -2.02
VPS52YDR484W YMR254CQ04838 102 aa2.41□□□□□ -2.02
VPS52YDR484W ADH7P25377 361 aa2.4□□□□□ -2.02
VPS52YDR484W MCM10P32354 571 aa2.4□□□□□ -2.02
VPS52YDR484W RTS1P38903 757 aa2.4□□□□□ -2.02
VPS52YDR484W MET30P39014 640 aa2.4□□□□□ -2.02
VPS52YDR484W DPH1P40487 425 aaKnown RBP2.4□□□□□ -2.02
VPS52YDR484W HXT9P40885 567 aa2.4□□□□□ -2.02
VPS52YDR484W TES1P41903 349 aaKnown RBP2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms