RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	SRO77	P38163	1010 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	LTP1	P40347	161 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	RPT6	Q01939	405 aa	Known RBP	2.4	□□□□□ -2.03
NCL1	YBL024W	YML037C	Q03703	340 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	SPC19	Q03954	165 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	ORM2	Q06144	216 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	YOL159C	Q08300	171 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	RRG1	Q12167	365 aa	Predicted RBP	2.4	□□□□□ -2.03
NCL1	YBL024W	PGK1	P00560	416 aa	Known RBP	2.39	□□□□□ -2.03
NCL1	YBL024W	ARD1	P07347	238 aa	Predicted RBP	2.39	□□□□□ -2.03
NCL1	YBL024W	FUR1	P18562	216 aa	Known RBP	2.39	□□□□□ -2.03
NCL1	YBL024W	ROX1	P25042	368 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	ERG3	P32353	365 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	RPC34	P32910	317 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	IMD2	P38697	523 aa	Known RBP	2.39	□□□□□ -2.03
NCL1	YBL024W	CCT6	P39079	546 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	YEL057C	P39983	233 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	ECM10	P39987	644 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	BUR6	P40096	142 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.39	□□□□□ -2.03	not detected
NCL1	YBL024W	ARF3	P40994	183 aa	RIP-Chip data	2.39	□□□□□ -2.03	not detected
NCL1	YBL024W	CIR1	P42940	261 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	TAX4	P47030	604 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	YJL043W	P47053	257 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	RPS7B	P48164	190 aa	Known RBP	2.39	□□□□□ -2.03
NCL1	YBL024W	IMD3	P50095	523 aa	Known RBP	2.39	□□□□□ -2.03
NCL1	YBL024W	YGR250C	P53316	781 aa	Known RBP	2.39	□□□□□ -2.03
NCL1	YBL024W	PSR1	Q07800	427 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	YEH1	Q07804	573 aa		2.39	□□□□□ -2.03
NCL1	YBL024W	RED1	P14291	827 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	MAK32	P23060	363 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	NPL6	P32832	435 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	SOF1	P33750	489 aa	Known RBP	2.38	□□□□□ -2.03
NCL1	YBL024W	YNG2	P38806	282 aa	Known RBP	2.38	□□□□□ -2.03
NCL1	YBL024W	ERV46	P39727	415 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	MRX1	P40050	688 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	XBP1	P40489	647 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	CDC1	P40986	491 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	YFR020W	P43600	232 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	CTK2	P46962	323 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	RPC11	Q04307	110 aa	Predicted RBP	2.38	□□□□□ -2.03
NCL1	YBL024W	IRC3	Q06683	689 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	YAP7	Q08182	245 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	ATG9	Q12142	997 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	GET3	Q12154	354 aa	Known RBP	2.38	□□□□□ -2.03
NCL1	YBL024W	ICT1	Q12385	394 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	YPT6	Q99260	215 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	OCA4	P25366	362 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	YIH1	P25637	258 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	GSY2	P27472	705 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	TMT1	P32643	299 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	LHS1	P36016	881 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	HOT13	P36078	116 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	ASG1	P40467	964 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	BUD7	Q08754	746 aa		2.38	□□□□□ -2.03
NCL1	YBL024W	HXK2	P04807	486 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	CHO1	P08456	276 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	KGD1	P20967	1014 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	VMA16	P23968	213 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	LCB1	P25045	558 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	AGP2	P38090	596 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	REG2	P38232	338 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	FTH1	P38310	465 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	DIA4	P38705	446 aa	Predicted RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	LSM5	P40089	93 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	MET28	P40573	187 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	RPN11	P43588	306 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	DPB11	P47027	764 aa	Predicted RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	NET1	P47035	1189 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	STR3	P53101	465 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	MAK10	Q02197	733 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	YMR155W	Q03795	547 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	BUD22	Q04347	519 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	SPN1	Q06505	410 aa	Predicted RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	THI3	Q07471	609 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	YOR389W	Q08912	624 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	RDL1	Q12305	139 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	GRX6	Q12438	231 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	RTN2	Q12443	393 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	YJR112W-A	Q3E743	109 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	EST1	P17214	699 aa	Predicted RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	APN1	P22936	367 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	SNU114	P36048	1008 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	BYE1	P36106	594 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	DOT5	P40553	215 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	CIN1	P40987	1014 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	MAF1	P41910	395 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	BNA3	P47039	444 aa	Known RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	IRC8	P47046	822 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	IST1	P53843	298 aa	Predicted RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	LUC7	Q07508	261 aa	Predicted RBP	2.37	□□□□□ -2.03
NCL1	YBL024W	RTT109	Q07794	436 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	INP53	Q12271	1107 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	YOL159C-A	Q3E769	90 aa		2.37	□□□□□ -2.03
NCL1	YBL024W	YER145C-A	A0A023PYF4	145 aa		2.36	□□□□□ -2.03
NCL1	YBL024W	BI2	P03873	423 aa		2.36	□□□□□ -2.03
NCL1	YBL024W	HOM3	P10869	527 aa		2.36	□□□□□ -2.03
NCL1	YBL024W	RPC53	P25441	422 aa		2.36	□□□□□ -2.03
NCL1	YBL024W	SYN8	P31377	255 aa		2.36	□□□□□ -2.03
NCL1	YBL024W	TIF3	P34167	436 aa	Known RBP	2.36	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms