RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	UBP7	P40453	1071 aa		4.13	□□□□□ -1.75
USV1	YPL230W	IME4	P41833	600 aa		4.13	□□□□□ -1.75
USV1	YPL230W	COQ6	P53318	479 aa		4.13	□□□□□ -1.75
USV1	YPL230W	VPS75	P53853	264 aa		4.13	□□□□□ -1.75
USV1	YPL230W	STP1	Q00947	519 aa		4.13	□□□□□ -1.75
USV1	YPL230W	ARP9	Q05123	467 aa		4.13	□□□□□ -1.75
USV1	YPL230W	YLR287C	Q05881	355 aa		4.13	□□□□□ -1.75
USV1	YPL230W	PCL8	Q08966	492 aa		4.13	□□□□□ -1.75
USV1	YPL230W	ULA1	Q12059	462 aa		4.13	□□□□□ -1.75
USV1	YPL230W	SCM3	Q12334	223 aa		4.13	□□□□□ -1.75
USV1	YPL230W	AI5_ALPHA	Q9ZZX1	630 aa		4.13	□□□□□ -1.75
USV1	YPL230W	CPA2	P03965	1118 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	FUR1	P18562	216 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	TFC3	P34111	1160 aa		4.12	□□□□□ -1.75
USV1	YPL230W	RPF2	P36160	344 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	RTS1	P38903	757 aa		4.12	□□□□□ -1.75
USV1	YPL230W	FUN12	P39730	1002 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	SEC24	P40482	926 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	ASN1	P49089	572 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	MUB1	Q03162	620 aa		4.12	□□□□□ -1.75
USV1	YPL230W	FCP1	Q03254	732 aa		4.12	□□□□□ -1.75
USV1	YPL230W	SYF1	Q04048	859 aa	Predicted RBP	4.12	□□□□□ -1.75
USV1	YPL230W	UTP21	Q06078	939 aa	Predicted RBP	4.12	□□□□□ -1.75
USV1	YPL230W	CTI6	Q08923	506 aa		4.12	□□□□□ -1.75
USV1	YPL230W	LCB4	Q12246	624 aa		4.12	□□□□□ -1.75
USV1	YPL230W	MDM20	Q12387	796 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	NOP58	Q12499	511 aa	Known RBP	4.12	□□□□□ -1.75
USV1	YPL230W	ZPS1	Q12512	249 aa		4.12	□□□□□ -1.75
USV1	YPL230W	MET17	P06106	444 aa		4.11	□□□□□ -1.75
USV1	YPL230W	WHI2	P12611	486 aa		4.11	□□□□□ -1.75
USV1	YPL230W	RED1	P14291	827 aa		4.11	□□□□□ -1.75
USV1	YPL230W	CKA1	P15790	372 aa		4.11	□□□□□ -1.75
USV1	YPL230W	YSP3	P25036	478 aa		4.11	□□□□□ -1.75
USV1	YPL230W	RRP43	P25359	394 aa	Predicted RBP	4.11	□□□□□ -1.75
USV1	YPL230W	POL4	P25615	582 aa		4.11	□□□□□ -1.75
USV1	YPL230W	HES1	P35843	434 aa		4.11	□□□□□ -1.75
USV1	YPL230W	MAL33	P38157	468 aa		4.11	□□□□□ -1.75
USV1	YPL230W	FLC2	P39719	783 aa		4.11	□□□□□ -1.75
USV1	YPL230W	ULP2	P40537	1034 aa	Predicted RBP	4.11	□□□□□ -1.75
USV1	YPL230W	DJP1	P40564	432 aa		4.11	□□□□□ -1.75
USV1	YPL230W	UBX6	P47049	396 aa		4.11	□□□□□ -1.75
USV1	YPL230W	YGL036W	P53185	909 aa	Predicted RBP	4.11	□□□□□ -1.75
USV1	YPL230W	COG2	P53271	262 aa		4.11	□□□□□ -1.75
USV1	YPL230W	RPT6	Q01939	405 aa	Known RBP	4.11	□□□□□ -1.75
USV1	YPL230W	YPL071C	Q02864	156 aa		4.11	□□□□□ -1.75
USV1	YPL230W	CRN1	Q06440	651 aa		4.11	□□□□□ -1.75
USV1	YPL230W	GPN2	Q08726	347 aa	Predicted RBP	4.11	□□□□□ -1.75
USV1	YPL230W	NMD4	Q12129	218 aa		4.11	□□□□□ -1.75
USV1	YPL230W	RRG1	Q12167	365 aa	Predicted RBP	4.11	□□□□□ -1.75
USV1	YPL230W	TPK2	P06245	380 aa		4.1	□□□□□ -1.75
USV1	YPL230W	PEP3	P27801	918 aa		4.1	□□□□□ -1.75
USV1	YPL230W	YKL050C	P35736	922 aa		4.1	□□□□□ -1.75
USV1	YPL230W	SAP1	P39955	897 aa	Known RBP	4.1	□□□□□ -1.75
USV1	YPL230W	LAS21	P40367	830 aa		4.1	□□□□□ -1.75
USV1	YPL230W	SPO22	P40511	975 aa		4.1	□□□□□ -1.75
USV1	YPL230W	MEP2	P41948	499 aa		4.1	□□□□□ -1.75
USV1	YPL230W	SWP82	P43554	623 aa		4.1	□□□□□ -1.75
USV1	YPL230W	MSY1	P48527	492 aa		4.1	□□□□□ -1.75
USV1	YPL230W	LYS4	P49367	693 aa	Predicted RBP	4.1	□□□□□ -1.75
USV1	YPL230W	LCL3	P53153	274 aa		4.1	□□□□□ -1.75
USV1	YPL230W	ADE16	P54113	591 aa	Known RBP	4.1	□□□□□ -1.75
USV1	YPL230W	RAD33	Q04231	177 aa		4.1	□□□□□ -1.75
USV1	YPL230W	SKG3	Q06315	1026 aa		4.1	□□□□□ -1.75
USV1	YPL230W	LYS21	Q12122	440 aa	Known RBP	4.1	□□□□□ -1.75
USV1	YPL230W	SNU66	Q12420	587 aa	Predicted RBP	4.1	□□□□□ -1.75
USV1	YPL230W	PGA3	Q12746	312 aa	Known RBP	4.1	□□□□□ -1.75
USV1	YPL230W	YBR085C-A	O43137	85 aa		4.09	□□□□□ -1.75
USV1	YPL230W	LAC1	P28496	418 aa		4.09	□□□□□ -1.75
USV1	YPL230W	MRPL9	P31334	269 aa		4.09	□□□□□ -1.75
USV1	YPL230W	TOA1	P32773	286 aa		4.09	□□□□□ -1.75
USV1	YPL230W	HOT13	P36078	116 aa		4.09	□□□□□ -1.75
USV1	YPL230W	SRO77	P38163	1010 aa		4.09	□□□□□ -1.75
USV1	YPL230W	ARF3	P40994	183 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
USV1	YPL230W	PSA1	P41940	361 aa	Known RBP	4.09	□□□□□ -1.75
USV1	YPL230W	CIR1	P42940	261 aa		4.09	□□□□□ -1.75
USV1	YPL230W	YFL015C	P43578	164 aa		4.09	□□□□□ -1.75
USV1	YPL230W	YGL117W	P53133	265 aa		4.09	□□□□□ -1.75
USV1	YPL230W	CPR8	P53728	308 aa		4.09	□□□□□ -1.75
USV1	YPL230W	YAT1	P80235	687 aa		4.09	□□□□□ -1.75
USV1	YPL230W	WAR1	Q03631	944 aa		4.09	□□□□□ -1.75
USV1	YPL230W	YDR109C	Q04585	715 aa		4.09	□□□□□ -1.75
USV1	YPL230W	HRD3	Q05787	833 aa		4.09	□□□□□ -1.75
USV1	YPL230W	ORM2	Q06144	216 aa		4.09	□□□□□ -1.75
USV1	YPL230W	SPN1	Q06505	410 aa	Predicted RBP	4.09	□□□□□ -1.75
USV1	YPL230W	SWA2	Q06677	668 aa		4.09	□□□□□ -1.75
USV1	YPL230W	GRC3	Q07845	632 aa		4.09	□□□□□ -1.75
USV1	YPL230W	TCO89	Q08921	799 aa		4.09	□□□□□ -1.75
USV1	YPL230W	RCN2	Q12044	265 aa		4.09	□□□□□ -1.75
USV1	YPL230W	BAG7	Q12128	409 aa		4.09	□□□□□ -1.75
USV1	YPL230W	SPE4	Q12455	300 aa		4.09	□□□□□ -1.75
USV1	YPL230W	PCT1	P13259	424 aa		4.08	□□□□□ -1.76
USV1	YPL230W	CBS1	P14066	229 aa		4.08	□□□□□ -1.76
USV1	YPL230W	MBR1	P23493	339 aa		4.08	□□□□□ -1.76
USV1	YPL230W	ROX1	P25042	368 aa		4.08	□□□□□ -1.76
USV1	YPL230W	ERG3	P32353	365 aa		4.08	□□□□□ -1.76
USV1	YPL230W	PEX5	P35056	612 aa		4.08	□□□□□ -1.76
USV1	YPL230W	NTR2	P36118	322 aa	Predicted RBP	4.08	□□□□□ -1.76
USV1	YPL230W	UBP13	P38187	747 aa		4.08	□□□□□ -1.76
USV1	YPL230W	VBA2	P38358	474 aa	Known RBP	4.08	□□□□□ -1.76
USV1	YPL230W	YGR250C	P53316	781 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms