RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	SOD2	P00447	233 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
UBP7	YIL156W	PHO84	P25297	587 aa	Known RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	PGM1	P33401	570 aa	Known RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	AUR1	P36107	401 aa	Predicted RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	GCD10	P41814	478 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	SPO1	P53541	631 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	APC5	Q08683	685 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	TY1A-NL1	Q12391	440 aa	Known RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	CTF3	Q12748	733 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	PRE2	P30656	287 aa	Known RBP	5.19	□□□□□ -1.58
UBP7	YIL156W	EHT1	P38295	451 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	MRX1	P40050	688 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	FTR1	P40088	404 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
UBP7	YIL156W	VMA13	P41807	478 aa	Known RBP	5.19	□□□□□ -1.58
UBP7	YIL156W	YGR066C	P53242	292 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	YPT6	Q99260	215 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	PDR10	P51533	1564 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	NUP188	P52593	1655 aa	Known RBP	5.19	□□□□□ -1.58
UBP7	YIL156W	GPM1	P00950	247 aa	Known RBP	5.19	□□□□□ -1.58
UBP7	YIL156W	SWC3	P31376	625 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	HMO1	Q03973	246 aa	Known RBP	5.19	□□□□□ -1.58
UBP7	YIL156W	DON1	Q05610	365 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	ZRG8	P40021	1076 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	SHE4	P51534	789 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	DBP9	Q06218	594 aa	Known RBP	5.19	□□□□□ -1.58
UBP7	YIL156W	MCM21	Q06675	368 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	BUD7	Q08754	746 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	TCO89	Q08921	799 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	AIM41	Q12032	185 aa		5.19	□□□□□ -1.58
UBP7	YIL156W	RTC5	Q12108	567 aa	Known RBP	5.19	□□□□□ -1.58
UBP7	YIL156W	RPS9B	P05755	195 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	AIP1	P46680	615 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	LYS4	P49367	693 aa	Predicted RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	RPA49	Q01080	415 aa	Predicted RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	MRD1	Q06106	887 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	PNO1	Q99216	274 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	TUP1	P16649	713 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	YHR112C	P38716	378 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	ASI2	P53895	289 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	CLU1	Q03690	1277 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	YML037C	Q03703	340 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	MGR3	Q04472	501 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	ATG29	Q12092	213 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	YOR019W	Q99248	730 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	KIN2	P13186	1147 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	VPS17	P32913	551 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	KES1	P35844	434 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	OTU2	P38747	307 aa	Known RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	CAK1	P43568	368 aa	Predicted RBP	5.18	□□□□□ -1.58
UBP7	YIL156W	SIZ1	Q04195	904 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	ECM3	Q99252	613 aa		5.18	□□□□□ -1.58
UBP7	YIL156W	KIN82	P25341	720 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	YSW1	P38280	609 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	RRM3	P38766	723 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	CCT6	P39079	546 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	MKT1	P40850	830 aa	Known RBP	5.17	□□□□□ -1.58
UBP7	YIL156W	WHI4	Q07655	649 aa	Known RBP	5.17	□□□□□ -1.58
UBP7	YIL156W	RNR1	P21524	888 aa	Known RBP	5.17	□□□□□ -1.58
UBP7	YIL156W	AIM26	P32858	118 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	GEX2	P36173	615 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	APT2	P36973	181 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	ERC1	P38767	581 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	STU2	P46675	888 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	SOV1	Q04748	898 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	CHS5	Q12114	671 aa	Known RBP	5.17	□□□□□ -1.58
UBP7	YIL156W	HER1	Q12276	1246 aa		5.17	□□□□□ -1.58
UBP7	YIL156W	RPL1A	P0CX43	217 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	RPL1B	P0CX44	217 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	DBP3	P20447	523 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	GRR1	P24814	1151 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	SYN8	P31377	255 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	REV7	P38927	245 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	VPS45	P38932	577 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	YGR111W	P53265	400 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	PDR16	P53860	351 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	RBA50	Q04418	439 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	NOP6	Q07623	225 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	POM34	Q12445	299 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	SPE1	P08432	466 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	SEC12	P11655	471 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	DAP2	P18962	818 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	RQC1	Q05468	723 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	PRP4	P20053	465 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	ERG6	P25087	383 aa	Known RBP	5.16	□□□□□ -1.58
UBP7	YIL156W	SEF1	P34228	1148 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	IME4	P41833	600 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	AGX1	P43567	385 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	ALT2	P52892	507 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	COS12	P53053	380 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	YDR239C	Q03780	787 aa		5.16	□□□□□ -1.58
UBP7	YIL156W	SIC1	P38634	284 aa		5.15	□□□□□ -1.58
UBP7	YIL156W	AKR1	P39010	764 aa		5.15	□□□□□ -1.58
UBP7	YIL156W	YGL036W	P53185	909 aa	Predicted RBP	5.15	□□□□□ -1.58
UBP7	YIL156W	TOF2	Q02208	771 aa		5.15	□□□□□ -1.58
UBP7	YIL156W	RRN5	Q02983	363 aa		5.15	□□□□□ -1.58
UBP7	YIL156W	VPS38	Q05919	439 aa		5.15	□□□□□ -1.58
UBP7	YIL156W	USO1	P25386	1790 aa		5.15	□□□□□ -1.59
UBP7	YIL156W	PMT1	P33775	817 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms