RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W DRS1P32892 752 aaKnown RBP11.35□□□□□ -0.59
UBP7YIL156W TFA1P36100 482 aa10.39□□□□□ -0.75
UBP7YIL156W BFR2Q06631 534 aaKnown RBP10.28□□□□□ -0.76
UBP7YIL156W MTC1P47018 478 aaKnown RBP10.24□□□□□ -0.77
UBP7YIL156W RQC2Q12532 1038 aaKnown RBP9.87□□□□□ -0.83
UBP7YIL156W AVT3P36062 692 aa9.48□□□□□ -0.89
UBP7YIL156W TAF7Q05021 590 aa9.39□□□□□ -0.91
UBP7YIL156W DIP2Q12220 943 aaPredicted RBP9.31□□□□□ -0.92
UBP7YIL156W DMA1P38823 416 aa8.99□□□□□ -0.97
UBP7YIL156W LEO1P38439 464 aa8.73□□□□□ -1.01
UBP7YIL156W RSE1Q04693 1361 aaKnown RBP8.47□□□□□ -1.05
UBP7YIL156W PTP3P40048 928 aa8.42□□□□□ -1.06
UBP7YIL156W LEU3P08638 886 aa8.27□□□□□ -1.08
UBP7YIL156W SAS10Q12136 610 aaPredicted RBP8.15□□□□□ -1.1
UBP7YIL156W SSP1P38871 571 aa8.12□□□□□ -1.11
UBP7YIL156W RPL17AP05740 184 aaKnown RBP8.11□□□□□ -1.11
UBP7YIL156W RPL17BP46990 184 aaKnown RBP8.11□□□□□ -1.11
UBP7YIL156W DMA2P53924 522 aa8.08□□□□□ -1.12
UBP7YIL156W ISW2Q08773 1120 aa8.07□□□□□ -1.12
UBP7YIL156W RIM101P33400 625 aa8.01□□□□□ -1.13
UBP7YIL156W RPG1P38249 964 aaKnown RBP7.96□□□□□ -1.14
UBP7YIL156W RPN1P38764 993 aaKnown RBP7.95□□□□□ -1.14
UBP7YIL156W ABP1P15891 592 aaKnown RBP7.94□□□□□ -1.14
UBP7YIL156W SPT21P35209 758 aa7.9□□□□□ -1.14
UBP7YIL156W REB1P21538 810 aa7.9□□□□□ -1.15
UBP7YIL156W RLF2Q12495 606 aa7.9□□□□□ -1.15
UBP7YIL156W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
UBP7YIL156W YAH1Q12184 172 aaKnown RBP7.84□□□□□ -1.15
UBP7YIL156W OXP1P28273 1286 aa7.82□□□□□ -1.16
UBP7YIL156W YLR271WQ06152 274 aa7.78□□□□□ -1.16
UBP7YIL156W MON2P48563 1636 aaPredicted RBP7.78□□□□□ -1.16
UBP7YIL156W IFH1P39520 1085 aa7.75□□□□□ -1.17
UBP7YIL156W CKB1P43639 278 aa7.75□□□□□ -1.17
UBP7YIL156W MGA2P40578 1113 aa7.72□□□□□ -1.17
UBP7YIL156W SPB4P25808 606 aaPredicted RBP7.68□□□□□ -1.18
UBP7YIL156W YIL055CP40523 627 aaKnown RBP7.67□□□□□ -1.18
UBP7YIL156W AIM44Q99299 758 aa7.65□□□□□ -1.18
UBP7YIL156W PRI1P10363 409 aa7.62□□□□□ -1.19
UBP7YIL156W CST9Q06032 482 aa7.61□□□□□ -1.19
UBP7YIL156W VPS70P47161 811 aa7.56□□□□□ -1.2
UBP7YIL156W NAP1P25293 417 aaKnown RBP7.55□□□□□ -1.2
UBP7YIL156W RSM7P47150 247 aa7.55□□□□□ -1.2
UBP7YIL156W YPR148CQ06523 435 aa7.53□□□□□ -1.2
UBP7YIL156W SET1P38827 1080 aaKnown RBP7.53□□□□□ -1.2
UBP7YIL156W KIN1P13185 1064 aa7.52□□□□□ -1.21
UBP7YIL156W ORC1P54784 914 aaPredicted RBP7.5□□□□□ -1.21
UBP7YIL156W YML020WQ03722 664 aa7.5□□□□□ -1.21
UBP7YIL156W IOC4Q04213 475 aa7.49□□□□□ -1.21
UBP7YIL156W HGH1P48362 394 aaKnown RBP7.47□□□□□ -1.21
UBP7YIL156W RAM2P29703 316 aa7.46□□□□□ -1.21
UBP7YIL156W DSF2P38213 736 aa7.46□□□□□ -1.21
UBP7YIL156W PSD2P53037 1138 aaKnown RBP7.45□□□□□ -1.22
UBP7YIL156W YNR021WP53723 404 aaKnown RBP7.45□□□□□ -1.22
UBP7YIL156W NOP8Q08287 484 aaPredicted RBP7.44□□□□□ -1.22
UBP7YIL156W YKR023WP36119 530 aaKnown RBP7.41□□□□□ -1.22
UBP7YIL156W PBS2P08018 668 aa7.4□□□□□ -1.23
UBP7YIL156W GLC3P32775 704 aa7.39□□□□□ -1.23
UBP7YIL156W SLX8P40072 274 aa7.38□□□□□ -1.23
UBP7YIL156W AIM7Q12156 149 aa7.37□□□□□ -1.23
UBP7YIL156W GUA1P38625 525 aaKnown RBP7.36□□□□□ -1.23
UBP7YIL156W AI2P03876 854 aa7.35□□□□□ -1.23
UBP7YIL156W AAD16Q02895 342 aa7.34□□□□□ -1.23
UBP7YIL156W SSA1P10591 642 aaKnown RBP7.33□□□□□ -1.24
UBP7YIL156W GEF1P37020 779 aa7.33□□□□□ -1.24
UBP7YIL156W TSR3Q12094 313 aaKnown RBP7.32□□□□□ -1.24
UBP7YIL156W MAM3Q12296 706 aa7.29□□□□□ -1.24
UBP7YIL156W SUB2Q07478 446 aaKnown RBP7.28□□□□□ -1.24
UBP7YIL156W IES2P40154 320 aa7.27□□□□□ -1.24
UBP7YIL156W HOP09932 586 aa7.27□□□□□ -1.25
UBP7YIL156W DIT2P21595 489 aa7.27□□□□□ -1.25
UBP7YIL156W RCR1P38212 213 aa7.27□□□□□ -1.25
UBP7YIL156W TFC8Q12308 588 aa7.26□□□□□ -1.25
UBP7YIL156W HPC2Q01448 625 aa7.25□□□□□ -1.25
UBP7YIL156W NUP42P49686 430 aaKnown RBP7.25□□□□□ -1.25
UBP7YIL156W NOP7P53261 605 aaKnown RBP7.25□□□□□ -1.25
UBP7YIL156W TFB3Q03290 321 aa7.24□□□□□ -1.25
UBP7YIL156W MAK21Q12176 1025 aaKnown RBP7.22□□□□□ -1.25
UBP7YIL156W MAK11P20484 414 aaKnown RBP7.22□□□□□ -1.25
UBP7YIL156W DCD1P06773 312 aa7.21□□□□□ -1.26
UBP7YIL156W BBC1P47068 1157 aa7.2□□□□□ -1.26
UBP7YIL156W FAP1P53971 965 aa7.2□□□□□ -1.26
UBP7YIL156W MRX12P47084 519 aa7.2□□□□□ -1.26
UBP7YIL156W ATF2P53296 535 aa7.19□□□□□ -1.26
UBP7YIL156W MRM1P25270 412 aa7.19□□□□□ -1.26
UBP7YIL156W REF2P42073 533 aaPredicted RBP7.18□□□□□ -1.26
UBP7YIL156W PKC1P24583 1151 aa7.16□□□□□ -1.26
UBP7YIL156W BRL1P38770 471 aa7.15□□□□□ -1.26
UBP7YIL156W SNU71P53207 620 aaKnown RBP7.15□□□□□ -1.27
UBP7YIL156W RTG3P38165 486 aa7.14□□□□□ -1.27
UBP7YIL156W SLD2P34252 453 aa7.13□□□□□ -1.27
UBP7YIL156W COQ8P27697 501 aa7.13□□□□□ -1.27
UBP7YIL156W BIM1P40013 344 aa7.12□□□□□ -1.27
UBP7YIL156W SSA4P22202 642 aaKnown RBP7.12□□□□□ -1.27
UBP7YIL156W GLN1P32288 370 aaKnown RBP7.11□□□□□ -1.27
UBP7YIL156W YJL007CP47080 104 aa7.1□□□□□ -1.27
UBP7YIL156W BCH2P36122 765 aa7.1□□□□□ -1.27
UBP7YIL156W MET10P39692 1035 aa7.1□□□□□ -1.27
UBP7YIL156W ATG32P40458 529 aa7.09□□□□□ -1.27
UBP7YIL156W PAM1P37304 830 aaKnown RBP7.09□□□□□ -1.27
UBP7YIL156W TY1B-DR4Q07793 1604 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms