RNA–Protein interactions for RNA: ENSMUST00000140979.7

Satb1-207, Transcript of DNA-binding protein SATB1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Satb1, Length 3,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1-207ENSMUST00000140979 Vps13bQ80TY5 3993 aa4.99□□□□□ -1.61
Satb1-207ENSMUST00000140979 Gm5767A0A0J9YTU8 78 aa4.97□□□□□ -1.61
Satb1-207ENSMUST00000140979 Lrp1bQ9JI18 4599 aa4.97□□□□□ -1.61
Satb1-207ENSMUST00000140979 Rps29P62274 56 aa4.95□□□□□ -1.62
Satb1-207ENSMUST00000140979 Krtap13-1Q8K198 168 aa4.95□□□□□ -1.62
Satb1-207ENSMUST00000140979 BC029722A0A0N4SW31 51 aa4.95□□□□□ -1.62
Satb1-207ENSMUST00000140979 Krtap3-1A2A591 98 aa4.93□□□□□ -1.62
Satb1-207ENSMUST00000140979 Herc2Q4U2R1 4836 aa4.91□□□□□ -1.62
Satb1-207ENSMUST00000140979 SacsQ9JLC8 4582 aa4.91□□□□□ -1.62
Satb1-207ENSMUST00000140979 Kiaa1109A2AAE1 5005 aa4.9□□□□□ -1.63
Satb1-207ENSMUST00000140979 Lrp1Q91ZX7 4545 aaKnown RBP4.88□□□□□ -1.63
Satb1-207ENSMUST00000140979 Spink7Q6IE32 76 aa4.87□□□□□ -1.63
Satb1-207ENSMUST00000140979 Gm19402J3QJV4 266 aa4.86□□□□□ -1.63
Satb1-207ENSMUST00000140979 Dnah8Q91XQ0 4731 aa4.83□□□□□ -1.64
Satb1-207ENSMUST00000140979 Gm17416Q30KP4 66 aa4.83□□□□□ -1.64
Satb1-207ENSMUST00000140979 Mycbp2Q7TPH6 4711 aa4.8□□□□□ -1.64
Satb1-207ENSMUST00000140979 Fat3Q8BNA6 4555 aa4.79□□□□□ -1.64
Satb1-207ENSMUST00000140979 Abca13Q5SSE9 5034 aa4.76□□□□□ -1.65
Satb1-207ENSMUST00000140979 Kmt2cQ8BRH4 4903 aa4.75□□□□□ -1.65
Satb1-207ENSMUST00000140979 Pkhd1E9PZ36 4059 aa4.73□□□□□ -1.65
Satb1-207ENSMUST00000140979 Fat2Q5F226 4351 aa4.72□□□□□ -1.65
Satb1-207ENSMUST00000140979 Lrp2A2ARV4 4660 aa4.71□□□□□ -1.66
Satb1-207ENSMUST00000140979 HydinQ80W93 5154 aa4.71□□□□□ -1.66
Satb1-207ENSMUST00000140979 Birc6O88738 4882 aa4.7□□□□□ -1.66
Satb1-207ENSMUST00000140979 2210017I01RikA0A0A6YVV1 95 aa4.7□□□□□ -1.66
Satb1-207ENSMUST00000140979 Lce1mQ9CR91 182 aa4.7□□□□□ -1.66
Satb1-207ENSMUST00000140979 Gm18596A0A1W2P860 280 aa4.67□□□□□ -1.66
Satb1-207ENSMUST00000140979 Tnp1P10856 55 aa4.67□□□□□ -1.66
Satb1-207ENSMUST00000140979 Dnhd1D3Z2X2 4750 aa4.66□□□□□ -1.66
Satb1-207ENSMUST00000140979 Gm17402F6Z0L5 76 aa4.65□□□□□ -1.67
Satb1-207ENSMUST00000140979 Sprr2a3Q4KL71 83 aa4.59□□□□□ -1.67
Satb1-207ENSMUST00000140979 Sprr2a1Q9CQK8 83 aa4.59□□□□□ -1.67
Satb1-207ENSMUST00000140979 PcloQ9QYX7 5068 aa4.59□□□□□ -1.67
Satb1-207ENSMUST00000140979 Crct1Q6PAI5 102 aa4.57□□□□□ -1.68
Satb1-207ENSMUST00000140979 Pkhd1l1Q80ZA4 4249 aa4.54□□□□□ -1.68
Satb1-207ENSMUST00000140979 Gm10318A0A1W2P728 225 aa4.53□□□□□ -1.68
Satb1-207ENSMUST00000140979 Herc1E9PZP8 4859 aa4.52□□□□□ -1.69
Satb1-207ENSMUST00000140979 Prm1P02319 51 aa4.35□□□□□ -1.71
Satb1-207ENSMUST00000140979 Krtap31-1Q9D644 177 aa4.35□□□□□ -1.71
Satb1-207ENSMUST00000140979 Gm7735D3YX18 52 aa4.33□□□□□ -1.72
Satb1-207ENSMUST00000140979 LorP18165 486 aa4.32□□□□□ -1.72
Satb1-207ENSMUST00000140979 Gm9789Q8BIG3 52 aa4.29□□□□□ -1.72
Satb1-207ENSMUST00000140979 Ush2AQ2QI47 5193 aa4.29□□□□□ -1.72
Satb1-207ENSMUST00000140979 Ubr4A2AN08 5180 aa4.29□□□□□ -1.72
Satb1-207ENSMUST00000140979 Krtap16-3Q8C1I6 86 aa4.24□□□□□ -1.73
Satb1-207ENSMUST00000140979 4932415D10RikA0A1W2P6U8 4986 aa4.21□□□□□ -1.74
Satb1-207ENSMUST00000140979 Krtap1-3A2A588 173 aa4.21□□□□□ -1.74
Satb1-207ENSMUST00000140979 Krtap19-3Q925H6 87 aa4.21□□□□□ -1.74
Satb1-207ENSMUST00000140979 Krtap17-1A2A5X6 109 aa4.19□□□□□ -1.74
Satb1-207ENSMUST00000140979 Krtap19-1Q925H2 87 aa4.19□□□□□ -1.74
Satb1-207ENSMUST00000140979 Krtap1-5A2A590 122 aa4.18□□□□□ -1.74
Satb1-207ENSMUST00000140979 Hmcn2A2AJ76 5100 aa4.15□□□□□ -1.74
Satb1-207ENSMUST00000140979 2310046K23RikA0A0A6YVW6 87 aa4.1□□□□□ -1.75
Satb1-207ENSMUST00000140979 ZanO88799 5376 aa4.07□□□□□ -1.76
Satb1-207ENSMUST00000140979 Fat4Q2PZL6 4981 aa4.05□□□□□ -1.76
Satb1-207ENSMUST00000140979 4933428G20RikQ9D3X4 101 aa4.05□□□□□ -1.76
Satb1-207ENSMUST00000140979 Krtap1-4Q3V2D6 188 aa4.01□□□□□ -1.77
Satb1-207ENSMUST00000140979 Krtap31-2Q8CAY5 177 aa3.95□□□□□ -1.78
Satb1-207ENSMUST00000140979 Krtap12-1Q9Z287 130 aa3.94□□□□□ -1.78
Satb1-207ENSMUST00000140979 Rnf213E9Q555 5152 aaKnown RBP3.92□□□□□ -1.78
Satb1-207ENSMUST00000140979 Gm10061D3Z714 54 aa3.92□□□□□ -1.78
Satb1-207ENSMUST00000140979 Lce1dQ9D731 133 aa3.91□□□□□ -1.78
Satb1-207ENSMUST00000140979 Krtap19-9aF8WH65 55 aa3.9□□□□□ -1.79
Satb1-207ENSMUST00000140979 Krtap9-5A2A5X3 358 aa3.86□□□□□ -1.79
Satb1-207ENSMUST00000140979 Lce1jD3YUU5 139 aa3.85□□□□□ -1.79
Satb1-207ENSMUST00000140979 Krtap9-3Q3V2C1 136 aa3.83□□□□□ -1.8
Satb1-207ENSMUST00000140979 Gm11569B1AQB1 180 aa3.81□□□□□ -1.8
Satb1-207ENSMUST00000140979 Krtap19-2Q925I0 141 aa3.8□□□□□ -1.8
Satb1-207ENSMUST00000140979 Krtap19-9bQ99NG9 58 aa3.78□□□□□ -1.8
Satb1-207ENSMUST00000140979 Krtap8-1O08633 61 aa3.78□□□□□ -1.8
Satb1-207ENSMUST00000140979 Mdn1A2ANY6 5589 aaKnown RBP3.76□□□□□ -1.81
Satb1-207ENSMUST00000140979 Lce1hQ9D6R3 140 aa3.73□□□□□ -1.81
Satb1-207ENSMUST00000140979 Syne1Q6ZWR6 8799 aa3.71□□□□□ -1.82
Satb1-207ENSMUST00000140979 Lce1eQ9D139 143 aa3.69□□□□□ -1.82
Satb1-207ENSMUST00000140979 Gm11938Q9D3H4 131 aa3.67□□□□□ -1.82
Satb1-207ENSMUST00000140979 SspoQ8CG65 4998 aa3.66□□□□□ -1.82
Satb1-207ENSMUST00000140979 Sprr2gO70558 76 aa3.65□□□□□ -1.82
Satb1-207ENSMUST00000140979 Krtap4-2B1AQ85 167 aa3.63□□□□□ -1.83
Satb1-207ENSMUST00000140979 Gm10272F7CZ33 110 aa3.62□□□□□ -1.83
Satb1-207ENSMUST00000140979 Gm6358A0A087WPH4 74 aa3.6□□□□□ -1.83
Satb1-207ENSMUST00000140979 Gm10100J3QK64 120 aa3.6□□□□□ -1.83
Satb1-207ENSMUST00000140979 Mt2P02798 61 aa3.57□□□□□ -1.84
Satb1-207ENSMUST00000140979 Lce1gQ9D195 139 aa3.57□□□□□ -1.84
Satb1-207ENSMUST00000140979 Lce1iQ9D6P5 149 aa3.57□□□□□ -1.84
Satb1-207ENSMUST00000140979 Krtap4-6Q3V4B7 195 aa3.54□□□□□ -1.84
Satb1-207ENSMUST00000140979 Muc5bE9Q5I3 4800 aa3.52□□□□□ -1.85
Satb1-207ENSMUST00000140979 Lce1a2Q9D1K4 149 aa3.52□□□□□ -1.85
Satb1-207ENSMUST00000140979 Sprr2iO70560 76 aa3.52□□□□□ -1.85
Satb1-207ENSMUST00000140979 Gm10142J3KMP7 120 aa3.51□□□□□ -1.85
Satb1-207ENSMUST00000140979 Gm11596B1AQB0 205 aa3.46□□□□□ -1.86
Satb1-207ENSMUST00000140979 Lce1cQ9D1C5 147 aa3.45□□□□□ -1.86
Satb1-207ENSMUST00000140979 Krtap4-1Q3UUY3 169 aa3.44□□□□□ -1.86
Satb1-207ENSMUST00000140979 Sprr2dO70555 85 aa3.43□□□□□ -1.86
Satb1-207ENSMUST00000140979 Syne2Q6ZWQ0 6874 aaKnown RBP3.43□□□□□ -1.86
Satb1-207ENSMUST00000140979 Krtap22-2J3QNX6 67 aa3.42□□□□□ -1.86
Satb1-207ENSMUST00000140979 Lce3bQ9CQM7 98 aa3.42□□□□□ -1.86
Satb1-207ENSMUST00000140979 Sprr2kO70562 68 aa3.41□□□□□ -1.86
Satb1-207ENSMUST00000140979 Krtap4-16Q91W93 202 aa3.41□□□□□ -1.86
Satb1-207ENSMUST00000140979 Lce3cQ91V05 98 aa3.4□□□□□ -1.87
Satb1-207ENSMUST00000140979 Sprr2fO70557 76 aa3.39□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 659 ms