RNA–Protein interactions for RNA: ENSMUST00000140979.7

Satb1-207, Transcript of DNA-binding protein SATB1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Satb1, Length 3,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1-207ENSMUST00000140979 Rpgrip1Q9EPQ2 1331 aa17.79■□□□□ 0.44
Satb1-207ENSMUST00000140979 NischQ80TM9 1593 aa17.61■□□□□ 0.41
Satb1-207ENSMUST00000140979 Pcgf6Q99NA9 353 aa17.39■□□□□ 0.37
Satb1-207ENSMUST00000140979 DiexfQ8BTT6 772 aaKnown RBP17.11■□□□□ 0.33
Satb1-207ENSMUST00000140979 Gm35339A0A140LHH9 1649 aa17.01■□□□□ 0.31
Satb1-207ENSMUST00000140979 Las1lA2BE28 776 aaKnown RBP17.01■□□□□ 0.31
Satb1-207ENSMUST00000140979 Acin1Q9JIX8 1338 aaKnown RBP16.96■□□□□ 0.3
Satb1-207ENSMUST00000140979 Ehmt2Q9Z148 1263 aaKnown RBP16.94■□□□□ 0.3
Satb1-207ENSMUST00000140979 CenpbP27790 599 aa16.92■□□□□ 0.3
Satb1-207ENSMUST00000140979 Abcc9P70170 1546 aa16.87■□□□□ 0.29
Satb1-207ENSMUST00000140979 Neurod1Q60867 357 aa16.79■□□□□ 0.28
Satb1-207ENSMUST00000140979 Myt1Q8CFC2 1127 aa16.73■□□□□ 0.27
Satb1-207ENSMUST00000140979 Abcc8B2RUS7 1588 aa16.72■□□□□ 0.27
Satb1-207ENSMUST00000140979 Rhox8Q6VSS7 320 aa16.72■□□□□ 0.27
Satb1-207ENSMUST00000140979 Supt5hO55201 1082 aaKnown RBP16.62■□□□□ 0.25
Satb1-207ENSMUST00000140979 1700123L14RikQ3V2K7 440 aa16.58■□□□□ 0.24
Satb1-207ENSMUST00000140979 Bcl11aQ9QYE3 773 aa16.58■□□□□ 0.24
Satb1-207ENSMUST00000140979 Amer1Q7TS75 1132 aa16.48■□□□□ 0.23
Satb1-207ENSMUST00000140979 Csrnp3P59055 597 aa16.37■□□□□ 0.21
Satb1-207ENSMUST00000140979 PrkcshO08795 521 aa16.3■□□□□ 0.2
Satb1-207ENSMUST00000140979 Gm38655A0A286YDK6 273 aa16.14■□□□□ 0.17
Satb1-207ENSMUST00000140979 Zeb1Q64318 1117 aa16.13■□□□□ 0.17
Satb1-207ENSMUST00000140979 Trim41Q5NCC3 630 aa16.05■□□□□ 0.16
Satb1-207ENSMUST00000140979 Cngb1E1AZ71 1325 aa16.01■□□□□ 0.15
Satb1-207ENSMUST00000140979 Anks4bQ8K3X6 423 aa15.99■□□□□ 0.15
Satb1-207ENSMUST00000140979 Aplp2Q06335 707 aa15.96■□□□□ 0.15
Satb1-207ENSMUST00000140979 Ifnlr1Q8CGK5 535 aa15.89■□□□□ 0.13
Satb1-207ENSMUST00000140979 ScribQ80U72 1612 aa15.72■□□□□ 0.11
Satb1-207ENSMUST00000140979 Sall2Q9QX96 1004 aa15.71■□□□□ 0.11
Satb1-207ENSMUST00000140979 Fam71e1A1L3C1 212 aa15.69■□□□□ 0.1
Satb1-207ENSMUST00000140979 Cdk11bP24788 784 aaKnown RBP15.64■□□□□ 0.09
Satb1-207ENSMUST00000140979 Wdr66E9Q743 1299 aa15.6■□□□□ 0.09
Satb1-207ENSMUST00000140979 Ttbk1Q6PCN3 1308 aa15.59■□□□□ 0.09
Satb1-207ENSMUST00000140979 NacadQ5SWP3 1504 aa15.57■□□□□ 0.08
Satb1-207ENSMUST00000140979 Ccdc180J3QNE4 1664 aa15.56■□□□□ 0.08
Satb1-207ENSMUST00000140979 Mapk8ip2Q9ERE9 830 aa15.54■□□□□ 0.08
Satb1-207ENSMUST00000140979 Nop58Q6DFW4 536 aaKnown RBP15.53■□□□□ 0.08
Satb1-207ENSMUST00000140979 Kdm5dQ62240 1548 aa15.53■□□□□ 0.08
Satb1-207ENSMUST00000140979 Ppargc1bQ8VHJ7 1014 aa15.46■□□□□ 0.07
Satb1-207ENSMUST00000140979 Ccdc136Q3TVA9 1136 aa15.43■□□□□ 0.06
Satb1-207ENSMUST00000140979 Pknox2Q8BG99 474 aa15.4■□□□□ 0.06
Satb1-207ENSMUST00000140979 Rb1cc1Q9ESK9 1588 aa15.39■□□□□ 0.06
Satb1-207ENSMUST00000140979 Dcaf1Q80TR8 1506 aa15.38■□□□□ 0.05
Satb1-207ENSMUST00000140979 Hdac5Q9Z2V6 1113 aa15.36■□□□□ 0.05
Satb1-207ENSMUST00000140979 Zcchc6Q5BLK4 1491 aaKnown RBP15.35■□□□□ 0.05
Satb1-207ENSMUST00000140979 SafbD3YXK2 937 aaKnown RBP15.29■□□□□ 0.04
Satb1-207ENSMUST00000140979 NefmP08553 848 aa15.29■□□□□ 0.04
Satb1-207ENSMUST00000140979 Pelp1Q9DBD5 1123 aaKnown RBP15.27■□□□□ 0.03
Satb1-207ENSMUST00000140979 Rtl1Q7M732 1744 aa15.23■□□□□ 0.03
Satb1-207ENSMUST00000140979 Sycp2Q9CUU3 1500 aa15.16■□□□□ 0.02
Satb1-207ENSMUST00000140979 Fgd1P52734 960 aa15.15■□□□□ 0.02
Satb1-207ENSMUST00000140979 Baz1aO88379 1555 aa15.13■□□□□ 0.01
Satb1-207ENSMUST00000140979 Rtl5Q5DTT4 599 aa15.1■□□□□ 0.01
Satb1-207ENSMUST00000140979 NrdcQ8BHG1 1161 aa15.1■□□□□ 0.01
Satb1-207ENSMUST00000140979 Plcd4Q8K3R3 807 aa15.08■□□□□ 0.01
Satb1-207ENSMUST00000140979 Anp32aO35381 247 aa15.06■□□□□ 0
Satb1-207ENSMUST00000140979 Plppr3Q7TPB0 716 aa15.06■□□□□ 0
Satb1-207ENSMUST00000140979 Hnrnpul2Q00PI9 745 aaKnown RBP15.06■□□□□ 0
Satb1-207ENSMUST00000140979 Aebp2Q9Z248 504 aaKnown RBP15.06■□□□□ 0
Satb1-207ENSMUST00000140979 HrcG5E8J6 738 aa15.05■□□□□ -0
Satb1-207ENSMUST00000140979 Esf1Q3V1V3 845 aaKnown RBP15.04■□□□□ -0
Satb1-207ENSMUST00000140979 Mier1Q5UAK0 511 aa15.01□□□□□ -0.01
Satb1-207ENSMUST00000140979 Gtf3c3Q3TMP1 882 aa15.01□□□□□ -0.01
Satb1-207ENSMUST00000140979 Il27Q8K3I6 234 aa14.99□□□□□ -0.01
Satb1-207ENSMUST00000140979 Tnnt3Q9QZ47 272 aa14.97□□□□□ -0.01
Satb1-207ENSMUST00000140979 ClspnQ80YR7 1315 aa14.96□□□□□ -0.02
Satb1-207ENSMUST00000140979 Ap3b1Q9Z1T1 1105 aa14.88□□□□□ -0.03
Satb1-207ENSMUST00000140979 Irx3P81067 507 aa14.86□□□□□ -0.03
Satb1-207ENSMUST00000140979 Crybg2B7ZCC2 1516 aa14.82□□□□□ -0.04
Satb1-207ENSMUST00000140979 Upf2A2AT37 1269 aaKnown RBP14.81□□□□□ -0.04
Satb1-207ENSMUST00000140979 4933416C03RikQ3V063 378 aa14.8□□□□□ -0.04
Satb1-207ENSMUST00000140979 Taok2Q6ZQ29 1240 aa14.77□□□□□ -0.05
Satb1-207ENSMUST00000140979 Nolc1E9Q5C9 702 aaKnown RBP14.75□□□□□ -0.05
Satb1-207ENSMUST00000140979 Zfp777B9EKF4 885 aa14.74□□□□□ -0.05
Satb1-207ENSMUST00000140979 BicraF8VPZ9 1578 aa14.74□□□□□ -0.05
Satb1-207ENSMUST00000140979 Gtf3c5Q8R2T8 520 aa14.72□□□□□ -0.05
Satb1-207ENSMUST00000140979 Rtn4Q99P72 1162 aaKnown RBP14.72□□□□□ -0.05
Satb1-207ENSMUST00000140979 Supt16hQ920B9 1047 aa14.68□□□□□ -0.06
Satb1-207ENSMUST00000140979 Brd4Q9ESU6 1400 aaKnown RBP14.66□□□□□ -0.06
Satb1-207ENSMUST00000140979 Ccdc27Q3V036 639 aa14.65□□□□□ -0.06
Satb1-207ENSMUST00000140979 Cecr2E9Q2Z1 1453 aa14.63□□□□□ -0.07
Satb1-207ENSMUST00000140979 Ipo4Q8VI75 1082 aa14.62□□□□□ -0.07
Satb1-207ENSMUST00000140979 Pds5bQ4VA53 1446 aaKnown RBP14.62□□□□□ -0.07
Satb1-207ENSMUST00000140979 Smarca2Q6DIC0 1577 aa14.62□□□□□ -0.07
Satb1-207ENSMUST00000140979 Gab3Q8BSM5 595 aa14.61□□□□□ -0.07
Satb1-207ENSMUST00000140979 Ccdc9Q8VC31 543 aaKnown RBP14.59□□□□□ -0.07
Satb1-207ENSMUST00000140979 DaxxO35613 739 aa14.58□□□□□ -0.08
Satb1-207ENSMUST00000140979 Hsp90aa1P07901 733 aaKnown RBP14.58□□□□□ -0.08
Satb1-207ENSMUST00000140979 Calr4Q3TQS0 420 aa14.58□□□□□ -0.08
Satb1-207ENSMUST00000140979 Ppp4r2Q0VGB7 417 aa14.57□□□□□ -0.08
Satb1-207ENSMUST00000140979 BccipQ9CWI3 316 aa14.56□□□□□ -0.08
Satb1-207ENSMUST00000140979 UbtfP25976 765 aaKnown RBP14.55□□□□□ -0.08
Satb1-207ENSMUST00000140979 Zbtb4Q5F293 982 aa14.53□□□□□ -0.08
Satb1-207ENSMUST00000140979 CatipB9EKE5 520 aa14.52□□□□□ -0.09
Satb1-207ENSMUST00000140979 Znf692Q3U381 531 aa14.5□□□□□ -0.09
Satb1-207ENSMUST00000140979 Eif5bQ05D44 1216 aaKnown RBP14.49□□□□□ -0.09
Satb1-207ENSMUST00000140979 Atad2bE9Q166 1460 aaKnown RBP14.48□□□□□ -0.09
Satb1-207ENSMUST00000140979 Slc24a1Q91WD8 1130 aa14.48□□□□□ -0.09
Satb1-207ENSMUST00000140979 TonslQ6NZL6 1363 aa14.47□□□□□ -0.09
Satb1-207ENSMUST00000140979 AampJ3QN89 436 aa14.47□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 109.7 ms