RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Gm11562A0PK51 136 aa7.93□□□□□ -1.14
Tpm1-215ENSMUST00000113705 Krtap3-1A2A591 98 aa7.9□□□□□ -1.14
Tpm1-215ENSMUST00000113705 Krtap17-1A2A5X6 109 aa7.88□□□□□ -1.15
Tpm1-215ENSMUST00000113705 Tmem258P61166 79 aa7.86□□□□□ -1.15
Tpm1-215ENSMUST00000113705 Krtap28-10A0A1Y7VP58 119 aa7.85□□□□□ -1.15
Tpm1-215ENSMUST00000113705 Krtap1-5A2A590 122 aa7.85□□□□□ -1.15
Tpm1-215ENSMUST00000113705 Smlr1J3QMJ4 66 aa7.82□□□□□ -1.16
Tpm1-215ENSMUST00000113705 SmcpP15265 143 aa7.82□□□□□ -1.16
Tpm1-215ENSMUST00000113705 Gm19935A0A1B0GSF9 52 aa7.81□□□□□ -1.16
Tpm1-215ENSMUST00000113705 Gm10160F6Y577 67 aa7.77□□□□□ -1.17
Tpm1-215ENSMUST00000113705 Lce1gQ9D195 139 aa7.77□□□□□ -1.17
Tpm1-215ENSMUST00000113705 Krtap31-2Q8CAY5 177 aa7.76□□□□□ -1.17
Tpm1-215ENSMUST00000113705 4930507D05RikQ8C9C9 103 aa7.76□□□□□ -1.17
Tpm1-215ENSMUST00000113705 Gm21798J3QNU5 87 aa7.74□□□□□ -1.17
Tpm1-215ENSMUST00000113705 Coa5Q99M07 74 aa7.74□□□□□ -1.17
Tpm1-215ENSMUST00000113705 2310079G19RikQ9D6L6 185 aa7.74□□□□□ -1.17
Tpm1-215ENSMUST00000113705 SnurfQ9WU12 71 aa7.72□□□□□ -1.17
Tpm1-215ENSMUST00000113705 Pet100P0DJE0 76 aa7.71□□□□□ -1.17
Tpm1-215ENSMUST00000113705 A0A1Y7VLE6 161 aa7.71□□□□□ -1.18
Tpm1-215ENSMUST00000113705 Gm10643Q3URG9 111 aa7.69□□□□□ -1.18
Tpm1-215ENSMUST00000113705 Smim20D3Z7Q2 69 aa7.65□□□□□ -1.18
Tpm1-215ENSMUST00000113705 Syne2Q6ZWQ0 6874 aaKnown RBP7.64□□□□□ -1.19
Tpm1-215ENSMUST00000113705 Rps28P62858 69 aaKnown RBP7.63□□□□□ -1.19
Tpm1-215ENSMUST00000113705 Defb1P56386 69 aa7.62□□□□□ -1.19
Tpm1-215ENSMUST00000113705 Krtap28-13A0A087WQP5 138 aa7.61□□□□□ -1.19
Tpm1-215ENSMUST00000113705 Cdc42se1Q8BHL7 80 aa7.61□□□□□ -1.19
Tpm1-215ENSMUST00000113705 Serp1Q9Z1W5 66 aa7.61□□□□□ -1.19
Tpm1-215ENSMUST00000113705 B930094E09RikQ8C4T2 136 aa7.59□□□□□ -1.2
Tpm1-215ENSMUST00000113705 Gm19426M0QWC7 77 aa7.58□□□□□ -1.2
Tpm1-215ENSMUST00000113705 Krtap9-5A2A5X3 358 aa7.57□□□□□ -1.2
Tpm1-215ENSMUST00000113705 Krtap19-2Q925I0 141 aa7.56□□□□□ -1.2
Tpm1-215ENSMUST00000113705 Brk1Q91VR8 75 aa7.55□□□□□ -1.2
Tpm1-215ENSMUST00000113705 Lce1jD3YUU5 139 aa7.54□□□□□ -1.2
Tpm1-215ENSMUST00000113705 Muc5bE9Q5I3 4800 aa7.5□□□□□ -1.21
Tpm1-215ENSMUST00000113705 Gm11596B1AQB0 205 aa7.49□□□□□ -1.21
Tpm1-215ENSMUST00000113705 Krtap12-1Q9Z287 130 aa7.48□□□□□ -1.21
Tpm1-215ENSMUST00000113705 Krtap31-1Q9D644 177 aa7.48□□□□□ -1.21
Tpm1-215ENSMUST00000113705 Mdn1A2ANY6 5589 aaKnown RBP7.45□□□□□ -1.22
Tpm1-215ENSMUST00000113705 Krtap4-6Q3V4B7 195 aa7.45□□□□□ -1.22
Tpm1-215ENSMUST00000113705 Cox6b2Q80ZN9 88 aa7.43□□□□□ -1.22
Tpm1-215ENSMUST00000113705 Gm17606F6ZL36 78 aa7.43□□□□□ -1.22
Tpm1-215ENSMUST00000113705 A030005K14RikA0A1Y7VNY1 122 aa7.42□□□□□ -1.22
Tpm1-215ENSMUST00000113705 Gm20661K7N787 53 aa7.41□□□□□ -1.22
Tpm1-215ENSMUST00000113705 Phxr4P15974 95 aa7.41□□□□□ -1.22
Tpm1-215ENSMUST00000113705 Pla2g10Q9QXX3 151 aa7.39□□□□□ -1.23
Tpm1-215ENSMUST00000113705 H2al1aQ5M8Q2 105 aa7.36□□□□□ -1.23
Tpm1-215ENSMUST00000113705 H2al1eQ810S6 105 aa7.36□□□□□ -1.23
Tpm1-215ENSMUST00000113705 SptssbQ925E8 76 aa7.34□□□□□ -1.23
Tpm1-215ENSMUST00000113705 BC029722A0A0N4SW31 51 aa7.33□□□□□ -1.24
Tpm1-215ENSMUST00000113705 Prm2P07978 107 aa7.31□□□□□ -1.24
Tpm1-215ENSMUST00000113705 Gm10382Q3V0T5 144 aa7.31□□□□□ -1.24
Tpm1-215ENSMUST00000113705 Krtap19-9aF8WH65 55 aa7.29□□□□□ -1.24
Tpm1-215ENSMUST00000113705 Uqcr11Q9CPX8 56 aa7.25□□□□□ -1.25
Tpm1-215ENSMUST00000113705 H2al1bA0A087WP11 105 aa7.25□□□□□ -1.25
Tpm1-215ENSMUST00000113705 Gm6358A0A087WPH4 74 aa7.23□□□□□ -1.25
Tpm1-215ENSMUST00000113705 Gm20537G3UYK7 97 aa7.23□□□□□ -1.25
Tpm1-215ENSMUST00000113705 Spink7Q6IE32 76 aa7.23□□□□□ -1.25
Tpm1-215ENSMUST00000113705 Limd2Q8BGB5 128 aa7.22□□□□□ -1.25
Tpm1-215ENSMUST00000113705 A030005L19RikA0A1Y7VIU2 113 aa7.2□□□□□ -1.26
Tpm1-215ENSMUST00000113705 Ndufb1P0DN34 57 aa7.2□□□□□ -1.26
Tpm1-215ENSMUST00000113705 CriptO70333 101 aa7.15□□□□□ -1.27
Tpm1-215ENSMUST00000113705 Gm11564A2A4L9 201 aa7.13□□□□□ -1.27
Tpm1-215ENSMUST00000113705 Gm11595B1AQA7 289 aa7.13□□□□□ -1.27
Tpm1-215ENSMUST00000113705 Krtap4-8B1AQA8 209 aa7.13□□□□□ -1.27
Tpm1-215ENSMUST00000113705 Sec61gP60060 68 aa7.08□□□□□ -1.28
Tpm1-215ENSMUST00000113705 Lce1hQ9D6R3 140 aa7.08□□□□□ -1.28
Tpm1-215ENSMUST00000113705 Lce1iQ9D6P5 149 aa7.05□□□□□ -1.28
Tpm1-215ENSMUST00000113705 Lce1bQ9D149 137 aa7.03□□□□□ -1.28
Tpm1-215ENSMUST00000113705 4933415A04RikQ9D443 101 aa6.96□□□□□ -1.3
Tpm1-215ENSMUST00000113705 Lce1a2Q9D1K4 149 aa6.94□□□□□ -1.3
Tpm1-215ENSMUST00000113705 Gm10337F7DEP7 55 aa6.92□□□□□ -1.3
Tpm1-215ENSMUST00000113705 Krtap4-9B1AQA9 244 aa6.92□□□□□ -1.3
Tpm1-215ENSMUST00000113705 H2al1kJ3QP08 105 aa6.9□□□□□ -1.3
Tpm1-215ENSMUST00000113705 H2al1mQ9DAD9 105 aa6.9□□□□□ -1.3
Tpm1-215ENSMUST00000113705 Mt2P02798 61 aa6.89□□□□□ -1.31
Tpm1-215ENSMUST00000113705 Fsip2A2ARZ3 6995 aa6.88□□□□□ -1.31
Tpm1-215ENSMUST00000113705 Mt4P47945 62 aa6.85□□□□□ -1.31
Tpm1-215ENSMUST00000113705 Gm7544A0A1Y7VJ58 118 aa6.84□□□□□ -1.31
Tpm1-215ENSMUST00000113705 Gm9955Q8CEJ8 102 aa6.81□□□□□ -1.32
Tpm1-215ENSMUST00000113705 Gm19668J3QMD1 248 aa6.77□□□□□ -1.33
Tpm1-215ENSMUST00000113705 Sprr2a3Q4KL71 83 aa6.77□□□□□ -1.33
Tpm1-215ENSMUST00000113705 Sprr2a1Q9CQK8 83 aa6.77□□□□□ -1.33
Tpm1-215ENSMUST00000113705 Krtap8-1O08633 61 aa6.76□□□□□ -1.33
Tpm1-215ENSMUST00000113705 A0A1Y7VJ07 166 aa6.73□□□□□ -1.33
Tpm1-215ENSMUST00000113705 Krtap9-3Q3V2C1 136 aa6.72□□□□□ -1.33
Tpm1-215ENSMUST00000113705 Krtap4-13Q9D7P3 165 aa6.68□□□□□ -1.34
Tpm1-215ENSMUST00000113705 Gm3646F6S692 53 aa6.67□□□□□ -1.34
Tpm1-215ENSMUST00000113705 Gm17402F6Z0L5 76 aa6.63□□□□□ -1.35
Tpm1-215ENSMUST00000113705 Lce1eQ9D139 143 aa6.63□□□□□ -1.35
Tpm1-215ENSMUST00000113705 Ndufs5Q99LY9 106 aa6.62□□□□□ -1.35
Tpm1-215ENSMUST00000113705 Gm38119A0A0A6YX29 146 aa6.54□□□□□ -1.36
Tpm1-215ENSMUST00000113705 Krtap22-2J3QNX6 67 aa6.54□□□□□ -1.36
Tpm1-215ENSMUST00000113705 Krtap6-3A0A087WQL6 57 aa6.53□□□□□ -1.36
Tpm1-215ENSMUST00000113705 Sprr2kO70562 68 aa6.53□□□□□ -1.36
Tpm1-215ENSMUST00000113705 Gm3880A0A1B0GSB3 72 aa6.48□□□□□ -1.37
Tpm1-215ENSMUST00000113705 A030014E15RikA0A1Y7VJV2 120 aa6.47□□□□□ -1.37
Tpm1-215ENSMUST00000113705 2300003K06RikA2A4M0 262 aa6.44□□□□□ -1.38
Tpm1-215ENSMUST00000113705 Lce1lQ9D1G7 135 aa6.39□□□□□ -1.39
Tpm1-215ENSMUST00000113705 Gm11559Q9D3H7 191 aa6.31□□□□□ -1.4
Tpm1-215ENSMUST00000113705 Camk2n1Q6QWF9 78 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 116.9 ms