RNA–Protein interactions for RNA: ENSMUST00000110586.9

Casc4-204, Transcript of Protein CASC4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Casc4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-204ENSMUST00000110586 Crct1Q6PAI5 102 aa6.91□□□□□ -1.3
Casc4-204ENSMUST00000110586 Lrp1bQ9JI18 4599 aa6.88□□□□□ -1.31
Casc4-204ENSMUST00000110586 HydinQ80W93 5154 aa6.87□□□□□ -1.31
Casc4-204ENSMUST00000110586 Gm17402F6Z0L5 76 aa6.87□□□□□ -1.31
Casc4-204ENSMUST00000110586 Vps13dB1ART2 4390 aa6.86□□□□□ -1.31
Casc4-204ENSMUST00000110586 Lrp1Q91ZX7 4545 aaKnown RBP6.84□□□□□ -1.31
Casc4-204ENSMUST00000110586 Vps13bQ80TY5 3993 aa6.83□□□□□ -1.32
Casc4-204ENSMUST00000110586 Fat3Q8BNA6 4555 aa6.82□□□□□ -1.32
Casc4-204ENSMUST00000110586 Mycbp2Q7TPH6 4711 aa6.81□□□□□ -1.32
Casc4-204ENSMUST00000110586 ApobE9Q414 4505 aa6.81□□□□□ -1.32
Casc4-204ENSMUST00000110586 Gm19402J3QJV4 266 aa6.8□□□□□ -1.32
Casc4-204ENSMUST00000110586 Dnah7cA0A087WR13 4024 aa6.78□□□□□ -1.32
Casc4-204ENSMUST00000110586 Dnah7aE9Q0T8 4024 aa6.71□□□□□ -1.33
Casc4-204ENSMUST00000110586 Dync2h1Q45VK7 4306 aa6.7□□□□□ -1.34
Casc4-204ENSMUST00000110586 Dync1h1Q9JHU4 4644 aaKnown RBP6.68□□□□□ -1.34
Casc4-204ENSMUST00000110586 Dnah2P0C6F1 4456 aa6.67□□□□□ -1.34
Casc4-204ENSMUST00000110586 Kiaa1109A2AAE1 5005 aa6.65□□□□□ -1.34
Casc4-204ENSMUST00000110586 Lrp2A2ARV4 4660 aa6.61□□□□□ -1.35
Casc4-204ENSMUST00000110586 Herc2Q4U2R1 4836 aa6.56□□□□□ -1.36
Casc4-204ENSMUST00000110586 Fat1A0A1L1SQU7 4645 aa6.55□□□□□ -1.36
Casc4-204ENSMUST00000110586 SacsQ9JLC8 4582 aa6.53□□□□□ -1.36
Casc4-204ENSMUST00000110586 Sprr2a3Q4KL71 83 aa6.49□□□□□ -1.37
Casc4-204ENSMUST00000110586 Sprr2a1Q9CQK8 83 aa6.49□□□□□ -1.37
Casc4-204ENSMUST00000110586 Abca13Q5SSE9 5034 aa6.38□□□□□ -1.39
Casc4-204ENSMUST00000110586 Pkd1O08852 4293 aa6.35□□□□□ -1.39
Casc4-204ENSMUST00000110586 Dnah8Q91XQ0 4731 aa6.32□□□□□ -1.4
Casc4-204ENSMUST00000110586 Fat2Q5F226 4351 aa6.26□□□□□ -1.41
Casc4-204ENSMUST00000110586 Ryr2E9Q401 4966 aaKnown RBP6.24□□□□□ -1.41
Casc4-204ENSMUST00000110586 Krtap1-5A2A590 122 aa6.24□□□□□ -1.41
Casc4-204ENSMUST00000110586 Gm18596A0A1W2P860 280 aa6.19□□□□□ -1.42
Casc4-204ENSMUST00000110586 LorP18165 486 aa6.18□□□□□ -1.42
Casc4-204ENSMUST00000110586 PcloQ9QYX7 5068 aa6.13□□□□□ -1.43
Casc4-204ENSMUST00000110586 Pkhd1E9PZ36 4059 aa6.13□□□□□ -1.43
Casc4-204ENSMUST00000110586 Dnhd1D3Z2X2 4750 aa6.12□□□□□ -1.43
Casc4-204ENSMUST00000110586 4933428G20RikQ9D3X4 101 aa6.1□□□□□ -1.43
Casc4-204ENSMUST00000110586 Krtap4-1Q3UUY3 169 aa6.09□□□□□ -1.44
Casc4-204ENSMUST00000110586 Kmt2cQ8BRH4 4903 aa6.08□□□□□ -1.44
Casc4-204ENSMUST00000110586 Pkhd1l1Q80ZA4 4249 aa6.06□□□□□ -1.44
Casc4-204ENSMUST00000110586 Herc1E9PZP8 4859 aa6.03□□□□□ -1.44
Casc4-204ENSMUST00000110586 Krtap1-4Q3V2D6 188 aa6.01□□□□□ -1.45
Casc4-204ENSMUST00000110586 Ubr4A2AN08 5180 aa5.99□□□□□ -1.45
Casc4-204ENSMUST00000110586 Lce1mQ9CR91 182 aa5.9□□□□□ -1.47
Casc4-204ENSMUST00000110586 Birc6O88738 4882 aa5.87□□□□□ -1.47
Casc4-204ENSMUST00000110586 Krtap16-3Q8C1I6 86 aa5.85□□□□□ -1.47
Casc4-204ENSMUST00000110586 Krtap12-1Q9Z287 130 aa5.82□□□□□ -1.48
Casc4-204ENSMUST00000110586 Krtap19-9aF8WH65 55 aa5.79□□□□□ -1.48
Casc4-204ENSMUST00000110586 Krtap19-3Q925H6 87 aa5.79□□□□□ -1.48
Casc4-204ENSMUST00000110586 Mdn1A2ANY6 5589 aaKnown RBP5.78□□□□□ -1.48
Casc4-204ENSMUST00000110586 Krtap19-9bQ99NG9 58 aa5.75□□□□□ -1.49
Casc4-204ENSMUST00000110586 Fat4Q2PZL6 4981 aa5.71□□□□□ -1.5
Casc4-204ENSMUST00000110586 2310046K23RikA0A0A6YVW6 87 aa5.71□□□□□ -1.5
Casc4-204ENSMUST00000110586 Krtap19-1Q925H2 87 aa5.7□□□□□ -1.5
Casc4-204ENSMUST00000110586 Syne1Q6ZWR6 8799 aa5.64□□□□□ -1.51
Casc4-204ENSMUST00000110586 Gm11555B1AQ89 175 aa5.63□□□□□ -1.51
Casc4-204ENSMUST00000110586 Gm11563B1AQ90 168 aa5.63□□□□□ -1.51
Casc4-204ENSMUST00000110586 Krtap4-7Q9D732 168 aa5.63□□□□□ -1.51
Casc4-204ENSMUST00000110586 4932415D10RikA0A1W2P6U8 4986 aa5.61□□□□□ -1.51
Casc4-204ENSMUST00000110586 ZanO88799 5376 aa5.61□□□□□ -1.51
Casc4-204ENSMUST00000110586 Gm6358A0A087WPH4 74 aa5.58□□□□□ -1.52
Casc4-204ENSMUST00000110586 Ush2AQ2QI47 5193 aa5.58□□□□□ -1.52
Casc4-204ENSMUST00000110586 Hmcn2A2AJ76 5100 aa5.57□□□□□ -1.52
Casc4-204ENSMUST00000110586 Krtap1-3A2A588 173 aa5.56□□□□□ -1.52
Casc4-204ENSMUST00000110586 Krtap8-1O08633 61 aa5.55□□□□□ -1.52
Casc4-204ENSMUST00000110586 Rnf213E9Q555 5152 aaKnown RBP5.53□□□□□ -1.52
Casc4-204ENSMUST00000110586 Lce1jD3YUU5 139 aa5.51□□□□□ -1.53
Casc4-204ENSMUST00000110586 Krtap9-5A2A5X3 358 aa5.48□□□□□ -1.53
Casc4-204ENSMUST00000110586 Gm7735D3YX18 52 aa5.4□□□□□ -1.54
Casc4-204ENSMUST00000110586 Prm1P02319 51 aa5.36□□□□□ -1.55
Casc4-204ENSMUST00000110586 Gm10100J3QK64 120 aa5.35□□□□□ -1.55
Casc4-204ENSMUST00000110586 Krtap17-1A2A5X6 109 aa5.32□□□□□ -1.56
Casc4-204ENSMUST00000110586 Gm9789Q8BIG3 52 aa5.32□□□□□ -1.56
Casc4-204ENSMUST00000110586 Krtap9-3Q3V2C1 136 aa5.29□□□□□ -1.56
Casc4-204ENSMUST00000110586 Krtap19-2Q925I0 141 aa5.25□□□□□ -1.57
Casc4-204ENSMUST00000110586 Gm10272F7CZ33 110 aa5.23□□□□□ -1.57
Casc4-204ENSMUST00000110586 Muc16A0A140LJ72 8478 aa5.23□□□□□ -1.57
Casc4-204ENSMUST00000110586 Gm10142J3KMP7 120 aa5.18□□□□□ -1.58
Casc4-204ENSMUST00000110586 Lce1hQ9D6R3 140 aa5.18□□□□□ -1.58
Casc4-204ENSMUST00000110586 Lce1dQ9D731 133 aa5.15□□□□□ -1.59
Casc4-204ENSMUST00000110586 Lce3bQ9CQM7 98 aa5.14□□□□□ -1.59
Casc4-204ENSMUST00000110586 Mt2P02798 61 aa5.13□□□□□ -1.59
Casc4-204ENSMUST00000110586 Krtap31-1Q9D644 177 aa5.11□□□□□ -1.59
Casc4-204ENSMUST00000110586 Gm10061D3Z714 54 aa5.1□□□□□ -1.59
Casc4-204ENSMUST00000110586 Sprr2gO70558 76 aa5.1□□□□□ -1.59
Casc4-204ENSMUST00000110586 Fsip2A2ARZ3 6995 aa5.07□□□□□ -1.6
Casc4-204ENSMUST00000110586 Sprr2kO70562 68 aa5.06□□□□□ -1.6
Casc4-204ENSMUST00000110586 Lce1iQ9D6P5 149 aa5.05□□□□□ -1.6
Casc4-204ENSMUST00000110586 Lce3cQ91V05 98 aa5.05□□□□□ -1.6
Casc4-204ENSMUST00000110586 Lce1a2Q9D1K4 149 aa5.04□□□□□ -1.6
Casc4-204ENSMUST00000110586 Krtap4-2B1AQ85 167 aa4.99□□□□□ -1.61
Casc4-204ENSMUST00000110586 Gm11569B1AQB1 180 aa4.98□□□□□ -1.61
Casc4-204ENSMUST00000110586 Lce3dE9Q8V1 98 aa4.98□□□□□ -1.61
Casc4-204ENSMUST00000110586 Gm11938Q9D3H4 131 aa4.97□□□□□ -1.61
Casc4-204ENSMUST00000110586 Krtap22-2J3QNX6 67 aa4.93□□□□□ -1.62
Casc4-204ENSMUST00000110586 Gm38119A0A0A6YX29 146 aa4.89□□□□□ -1.63
Casc4-204ENSMUST00000110586 Lce1eQ9D139 143 aa4.88□□□□□ -1.63
Casc4-204ENSMUST00000110586 Lce3eF8VQJ0 98 aa4.81□□□□□ -1.64
Casc4-204ENSMUST00000110586 Lce3aQ497I5 98 aa4.81□□□□□ -1.64
Casc4-204ENSMUST00000110586 Lce3fQ6PAI4 98 aa4.81□□□□□ -1.64
Casc4-204ENSMUST00000110586 Krtap4-6Q3V4B7 195 aa4.78□□□□□ -1.64
Casc4-204ENSMUST00000110586 Sprr2dO70555 85 aa4.74□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms