RNA–Protein interactions for RNA: ENSMUST00000110586.9

Casc4-204, Transcript of Protein CASC4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Casc4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-204ENSMUST00000110586 Rpgrip1Q9EPQ2 1331 aa25.1■■□□□ 1.61
Casc4-204ENSMUST00000110586 Rhox8Q6VSS7 320 aa24.99■■□□□ 1.59
Casc4-204ENSMUST00000110586 Ehmt2Q9Z148 1263 aaKnown RBP24.71■■□□□ 1.55
Casc4-204ENSMUST00000110586 Las1lA2BE28 776 aaKnown RBP23.97■■□□□ 1.43
Casc4-204ENSMUST00000110586 Pcgf6Q99NA9 353 aa23.93■■□□□ 1.42
Casc4-204ENSMUST00000110586 Acin1Q9JIX8 1338 aaKnown RBP23.89■■□□□ 1.42
Casc4-204ENSMUST00000110586 Zeb1Q64318 1117 aa23.49■■□□□ 1.35
Casc4-204ENSMUST00000110586 Supt5hO55201 1082 aaKnown RBP23.26■■□□□ 1.31
Casc4-204ENSMUST00000110586 CenpbP27790 599 aa23.18■■□□□ 1.3
Casc4-204ENSMUST00000110586 Cngb1E1AZ71 1325 aa23.07■■□□□ 1.28
Casc4-204ENSMUST00000110586 Neurod1Q60867 357 aa23.07■■□□□ 1.28
Casc4-204ENSMUST00000110586 NischQ80TM9 1593 aa23.06■■□□□ 1.28
Casc4-204ENSMUST00000110586 Wdr66E9Q743 1299 aa23.03■■□□□ 1.28
Casc4-204ENSMUST00000110586 DiexfQ8BTT6 772 aaKnown RBP22.92■■□□□ 1.26
Casc4-204ENSMUST00000110586 Myt1Q8CFC2 1127 aa22.81■■□□□ 1.24
Casc4-204ENSMUST00000110586 Ccdc136Q3TVA9 1136 aa22.63■■□□□ 1.21
Casc4-204ENSMUST00000110586 Csrnp3P59055 597 aa22.6■■□□□ 1.21
Casc4-204ENSMUST00000110586 Gm38655A0A286YDK6 273 aa22.53■■□□□ 1.2
Casc4-204ENSMUST00000110586 1700123L14RikQ3V2K7 440 aa22.51■■□□□ 1.19
Casc4-204ENSMUST00000110586 Ppargc1bQ8VHJ7 1014 aa22.43■■□□□ 1.18
Casc4-204ENSMUST00000110586 Cdk11bP24788 784 aaKnown RBP22.42■■□□□ 1.18
Casc4-204ENSMUST00000110586 Ccdc180J3QNE4 1664 aa22.38■■□□□ 1.17
Casc4-204ENSMUST00000110586 Trim41Q5NCC3 630 aa22.37■■□□□ 1.17
Casc4-204ENSMUST00000110586 Amer1Q7TS75 1132 aa22.34■■□□□ 1.17
Casc4-204ENSMUST00000110586 NefmP08553 848 aa22.31■■□□□ 1.16
Casc4-204ENSMUST00000110586 Gab3Q8BSM5 595 aa22.31■■□□□ 1.16
Casc4-204ENSMUST00000110586 Nop58Q6DFW4 536 aaKnown RBP22.27■■□□□ 1.16
Casc4-204ENSMUST00000110586 Ttbk1Q6PCN3 1308 aa22.21■■□□□ 1.15
Casc4-204ENSMUST00000110586 Anks4bQ8K3X6 423 aa22.19■■□□□ 1.14
Casc4-204ENSMUST00000110586 Pelp1Q9DBD5 1123 aaKnown RBP22.17■■□□□ 1.14
Casc4-204ENSMUST00000110586 Sall2Q9QX96 1004 aa22.17■■□□□ 1.14
Casc4-204ENSMUST00000110586 HrcG5E8J6 738 aa22.09■■□□□ 1.13
Casc4-204ENSMUST00000110586 Bcl11aQ9QYE3 773 aa22.04■■□□□ 1.12
Casc4-204ENSMUST00000110586 Aplp2Q06335 707 aa22.02■■□□□ 1.11
Casc4-204ENSMUST00000110586 UbtfP25976 765 aaKnown RBP21.86■■□□□ 1.09
Casc4-204ENSMUST00000110586 Rtl1Q7M732 1744 aa21.86■■□□□ 1.09
Casc4-204ENSMUST00000110586 Mier1Q5UAK0 511 aa21.8■■□□□ 1.08
Casc4-204ENSMUST00000110586 Mapk8ip2Q9ERE9 830 aa21.73■■□□□ 1.07
Casc4-204ENSMUST00000110586 Dcaf1Q80TR8 1506 aa21.71■■□□□ 1.07
Casc4-204ENSMUST00000110586 Abcc9P70170 1546 aa21.69■■□□□ 1.06
Casc4-204ENSMUST00000110586 Fam71e1A1L3C1 212 aa21.66■■□□□ 1.06
Casc4-204ENSMUST00000110586 Slc24a1Q91WD8 1130 aa21.61■■□□□ 1.05
Casc4-204ENSMUST00000110586 Tnnt3Q9QZ47 272 aa21.57■■□□□ 1.04
Casc4-204ENSMUST00000110586 Esf1Q3V1V3 845 aaKnown RBP21.56■■□□□ 1.04
Casc4-204ENSMUST00000110586 ClspnQ80YR7 1315 aa21.5■■□□□ 1.03
Casc4-204ENSMUST00000110586 PrkcshO08795 521 aa21.48■■□□□ 1.03
Casc4-204ENSMUST00000110586 Gm35339A0A140LHH9 1649 aa21.39■■□□□ 1.01
Casc4-204ENSMUST00000110586 Abcc8B2RUS7 1588 aa21.39■■□□□ 1.01
Casc4-204ENSMUST00000110586 Aebp2Q9Z248 504 aaKnown RBP21.39■■□□□ 1.01
Casc4-204ENSMUST00000110586 Anp32aO35381 247 aa21.38■■□□□ 1.01
Casc4-204ENSMUST00000110586 Myt1lP97500 1187 aa21.38■■□□□ 1.01
Casc4-204ENSMUST00000110586 4933416C03RikQ3V063 378 aa21.35■■□□□ 1.01
Casc4-204ENSMUST00000110586 SafbD3YXK2 937 aaKnown RBP21.33■■□□□ 1.01
Casc4-204ENSMUST00000110586 Ap3b1Q9Z1T1 1105 aa21.33■■□□□ 1
Casc4-204ENSMUST00000110586 Stra8P70278 393 aa21.31■■□□□ 1
Casc4-204ENSMUST00000110586 Rtl5Q5DTT4 599 aa21.31■■□□□ 1
Casc4-204ENSMUST00000110586 TonslQ6NZL6 1363 aa21.28■■□□□ 1
Casc4-204ENSMUST00000110586 Eif5bQ05D44 1216 aaKnown RBP21.21■□□□□ 0.99
Casc4-204ENSMUST00000110586 Ifnlr1Q8CGK5 535 aa21.19■□□□□ 0.98
Casc4-204ENSMUST00000110586 Hnrnpul2Q00PI9 745 aaKnown RBP21.11■□□□□ 0.97
Casc4-204ENSMUST00000110586 Ube2uB1AUC4 352 aa21■□□□□ 0.95
Casc4-204ENSMUST00000110586 Zcchc6Q5BLK4 1491 aaKnown RBP20.98■□□□□ 0.95
Casc4-204ENSMUST00000110586 Npm2Q80W85 207 aa20.95■□□□□ 0.94
Casc4-204ENSMUST00000110586 DaxxO35613 739 aa20.94■□□□□ 0.94
Casc4-204ENSMUST00000110586 NclP09405 707 aaKnown RBP20.9■□□□□ 0.94
Casc4-204ENSMUST00000110586 Calr4Q3TQS0 420 aa20.89■□□□□ 0.93
Casc4-204ENSMUST00000110586 Ppp4r2Q0VGB7 417 aa20.88■□□□□ 0.93
Casc4-204ENSMUST00000110586 Eid3Q3V124 375 aa20.85■□□□□ 0.93
Casc4-204ENSMUST00000110586 Il27Q8K3I6 234 aa20.72■□□□□ 0.91
Casc4-204ENSMUST00000110586 Chic1Q8CBW7 227 aa20.69■□□□□ 0.9
Casc4-204ENSMUST00000110586 Hdac5Q9Z2V6 1113 aa20.66■□□□□ 0.9
Casc4-204ENSMUST00000110586 Cep164Q5DU05 1446 aa20.66■□□□□ 0.9
Casc4-204ENSMUST00000110586 Wdr43Q6ZQL4 677 aaKnown RBP20.65■□□□□ 0.9
Casc4-204ENSMUST00000110586 NrdcQ8BHG1 1161 aa20.62■□□□□ 0.89
Casc4-204ENSMUST00000110586 Plekhg3Q4VAC9 1341 aa20.61■□□□□ 0.89
Casc4-204ENSMUST00000110586 Hsp90aa1P07901 733 aaKnown RBP20.54■□□□□ 0.88
Casc4-204ENSMUST00000110586 Fam50aQ9WV03 339 aaKnown RBP20.54■□□□□ 0.88
Casc4-204ENSMUST00000110586 Irx3P81067 507 aa20.53■□□□□ 0.88
Casc4-204ENSMUST00000110586 Nolc1E9Q5C9 702 aaKnown RBP20.52■□□□□ 0.88
Casc4-204ENSMUST00000110586 Ccdc27Q3V036 639 aa20.51■□□□□ 0.87
Casc4-204ENSMUST00000110586 Supt16hQ920B9 1047 aa20.51■□□□□ 0.87
Casc4-204ENSMUST00000110586 Pknox2Q8BG99 474 aa20.5■□□□□ 0.87
Casc4-204ENSMUST00000110586 Gtf3c3Q3TMP1 882 aa20.44■□□□□ 0.86
Casc4-204ENSMUST00000110586 Upf2A2AT37 1269 aaKnown RBP20.43■□□□□ 0.86
Casc4-204ENSMUST00000110586 P3h3Q8CG70 732 aa20.41■□□□□ 0.86
Casc4-204ENSMUST00000110586 Ccdc9Q8VC31 543 aaKnown RBP20.4■□□□□ 0.86
Casc4-204ENSMUST00000110586 Plcd4Q8K3R3 807 aa20.38■□□□□ 0.85
Casc4-204ENSMUST00000110586 NeflP08551 543 aa20.37■□□□□ 0.85
Casc4-204ENSMUST00000110586 Slc4a3P16283 1227 aa20.31■□□□□ 0.84
Casc4-204ENSMUST00000110586 Taok2Q6ZQ29 1240 aa20.26■□□□□ 0.83
Casc4-204ENSMUST00000110586 Zbtb7cQ8VCZ7 619 aa20.25■□□□□ 0.83
Casc4-204ENSMUST00000110586 4930567H17RikQ3V0K5 233 aa20.25■□□□□ 0.83
Casc4-204ENSMUST00000110586 ArxO35085 564 aa20.24■□□□□ 0.83
Casc4-204ENSMUST00000110586 Rb1cc1Q9ESK9 1588 aa20.22■□□□□ 0.83
Casc4-204ENSMUST00000110586 Mrs2Q5NCE8 434 aa20.16■□□□□ 0.82
Casc4-204ENSMUST00000110586 Zbtb4Q5F293 982 aa20.12■□□□□ 0.81
Casc4-204ENSMUST00000110586 Anp32bQ9EST5 272 aaKnown RBP20.08■□□□□ 0.81
Casc4-204ENSMUST00000110586 CanxP35564 591 aaKnown RBP20.05■□□□□ 0.8
Casc4-204ENSMUST00000110586 Rtn4Q99P72 1162 aaKnown RBP20.05■□□□□ 0.8
Casc4-204ENSMUST00000110586 Pak3Q61036 559 aa19.99■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 135.4 ms