RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Mycbp2Q7TPH6 4711 aa4.76□□□□□ -1.65
Trim9-201ENSMUST00000110520 Camk2n1Q6QWF9 78 aa4.76□□□□□ -1.65
Trim9-201ENSMUST00000110520 Fat2Q5F226 4351 aa4.75□□□□□ -1.65
Trim9-201ENSMUST00000110520 Abca13Q5SSE9 5034 aa4.75□□□□□ -1.65
Trim9-201ENSMUST00000110520 Gm17416Q30KP4 66 aa4.74□□□□□ -1.65
Trim9-201ENSMUST00000110520 SacsQ9JLC8 4582 aa4.73□□□□□ -1.65
Trim9-201ENSMUST00000110520 Gm21887J3QQ04 176 aa4.72□□□□□ -1.65
Trim9-201ENSMUST00000110520 2210017I01RikA0A0A6YVV1 95 aa4.7□□□□□ -1.66
Trim9-201ENSMUST00000110520 Pkhd1E9PZ36 4059 aa4.69□□□□□ -1.66
Trim9-201ENSMUST00000110520 Pkhd1l1Q80ZA4 4249 aa4.69□□□□□ -1.66
Trim9-201ENSMUST00000110520 Kiaa1109A2AAE1 5005 aa4.69□□□□□ -1.66
Trim9-201ENSMUST00000110520 B930094E09RikQ8C4T2 136 aa4.67□□□□□ -1.66
Trim9-201ENSMUST00000110520 Krtap13-1Q8K198 168 aa4.65□□□□□ -1.66
Trim9-201ENSMUST00000110520 Lrp2A2ARV4 4660 aa4.64□□□□□ -1.67
Trim9-201ENSMUST00000110520 Gm20538F6Z9R1 75 aa4.64□□□□□ -1.67
Trim9-201ENSMUST00000110520 Krtap3-1A2A591 98 aa4.63□□□□□ -1.67
Trim9-201ENSMUST00000110520 Herc2Q4U2R1 4836 aa4.63□□□□□ -1.67
Trim9-201ENSMUST00000110520 Ryr2E9Q401 4966 aaKnown RBP4.62□□□□□ -1.67
Trim9-201ENSMUST00000110520 Kmt2cQ8BRH4 4903 aa4.62□□□□□ -1.67
Trim9-201ENSMUST00000110520 PcloQ9QYX7 5068 aa4.56□□□□□ -1.68
Trim9-201ENSMUST00000110520 Ndufaf8A2AMZ4 74 aa4.52□□□□□ -1.69
Trim9-201ENSMUST00000110520 Dnhd1D3Z2X2 4750 aa4.45□□□□□ -1.7
Trim9-201ENSMUST00000110520 Dnah8Q91XQ0 4731 aa4.42□□□□□ -1.7
Trim9-201ENSMUST00000110520 Herc1E9PZP8 4859 aa4.36□□□□□ -1.71
Trim9-201ENSMUST00000110520 Gm18596A0A1W2P860 280 aa4.36□□□□□ -1.71
Trim9-201ENSMUST00000110520 Prm2P07978 107 aa4.36□□□□□ -1.71
Trim9-201ENSMUST00000110520 Gm19402J3QJV4 266 aa4.34□□□□□ -1.72
Trim9-201ENSMUST00000110520 Gm17402F6Z0L5 76 aa4.33□□□□□ -1.72
Trim9-201ENSMUST00000110520 Gm40193A0A1B0GT39 78 aa4.31□□□□□ -1.72
Trim9-201ENSMUST00000110520 Krtap1-5A2A590 122 aa4.3□□□□□ -1.72
Trim9-201ENSMUST00000110520 LorP18165 486 aa4.28□□□□□ -1.72
Trim9-201ENSMUST00000110520 Ubr4A2AN08 5180 aa4.28□□□□□ -1.72
Trim9-201ENSMUST00000110520 Birc6O88738 4882 aa4.27□□□□□ -1.73
Trim9-201ENSMUST00000110520 Tnp1P10856 55 aa4.27□□□□□ -1.73
Trim9-201ENSMUST00000110520 Gm19668J3QMD1 248 aa4.25□□□□□ -1.73
Trim9-201ENSMUST00000110520 Krtap16-3Q8C1I6 86 aa4.21□□□□□ -1.74
Trim9-201ENSMUST00000110520 Lce1mQ9CR91 182 aa4.2□□□□□ -1.74
Trim9-201ENSMUST00000110520 Sprr2a3Q4KL71 83 aa4.19□□□□□ -1.74
Trim9-201ENSMUST00000110520 Sprr2a1Q9CQK8 83 aa4.19□□□□□ -1.74
Trim9-201ENSMUST00000110520 Fat4Q2PZL6 4981 aa4.17□□□□□ -1.74
Trim9-201ENSMUST00000110520 Krtap1-4Q3V2D6 188 aa4.17□□□□□ -1.74
Trim9-201ENSMUST00000110520 Gm9112A2AI92 75 aa4.16□□□□□ -1.74
Trim9-201ENSMUST00000110520 Krtap7-1Q9D3I6 87 aa4.16□□□□□ -1.74
Trim9-201ENSMUST00000110520 Krtap19-3Q925H6 87 aa4.14□□□□□ -1.75
Trim9-201ENSMUST00000110520 Krtap19-1Q925H2 87 aa4.11□□□□□ -1.75
Trim9-201ENSMUST00000110520 ZanO88799 5376 aa4.1□□□□□ -1.75
Trim9-201ENSMUST00000110520 Ush2AQ2QI47 5193 aa4.05□□□□□ -1.76
Trim9-201ENSMUST00000110520 Krtap19-9aF8WH65 55 aa4.04□□□□□ -1.76
Trim9-201ENSMUST00000110520 Krtap12-1Q9Z287 130 aa4.04□□□□□ -1.76
Trim9-201ENSMUST00000110520 Rnf213E9Q555 5152 aaKnown RBP4.01□□□□□ -1.77
Trim9-201ENSMUST00000110520 Hmcn2A2AJ76 5100 aa3.99□□□□□ -1.77
Trim9-201ENSMUST00000110520 4932415D10RikA0A1W2P6U8 4986 aa3.97□□□□□ -1.77
Trim9-201ENSMUST00000110520 Krtap1-3A2A588 173 aa3.94□□□□□ -1.78
Trim9-201ENSMUST00000110520 Lce1jD3YUU5 139 aa3.94□□□□□ -1.78
Trim9-201ENSMUST00000110520 Prm1P02319 51 aa3.92□□□□□ -1.78
Trim9-201ENSMUST00000110520 Mdn1A2ANY6 5589 aaKnown RBP3.87□□□□□ -1.79
Trim9-201ENSMUST00000110520 Krtap9-5A2A5X3 358 aa3.87□□□□□ -1.79
Trim9-201ENSMUST00000110520 Gm7735D3YX18 52 aa3.87□□□□□ -1.79
Trim9-201ENSMUST00000110520 Krtap17-1A2A5X6 109 aa3.84□□□□□ -1.8
Trim9-201ENSMUST00000110520 Krtap19-9bQ99NG9 58 aa3.81□□□□□ -1.8
Trim9-201ENSMUST00000110520 Gm9789Q8BIG3 52 aa3.77□□□□□ -1.81
Trim9-201ENSMUST00000110520 Gm6358A0A087WPH4 74 aa3.75□□□□□ -1.81
Trim9-201ENSMUST00000110520 Krtap19-2Q925I0 141 aa3.74□□□□□ -1.81
Trim9-201ENSMUST00000110520 Sprr2kO70562 68 aa3.69□□□□□ -1.82
Trim9-201ENSMUST00000110520 Krtap8-1O08633 61 aa3.69□□□□□ -1.82
Trim9-201ENSMUST00000110520 4933428G20RikQ9D3X4 101 aa3.66□□□□□ -1.82
Trim9-201ENSMUST00000110520 Mt2P02798 61 aa3.63□□□□□ -1.83
Trim9-201ENSMUST00000110520 Lce1iQ9D6P5 149 aa3.63□□□□□ -1.83
Trim9-201ENSMUST00000110520 Lce1a2Q9D1K4 149 aa3.6□□□□□ -1.83
Trim9-201ENSMUST00000110520 Gm10061D3Z714 54 aa3.57□□□□□ -1.84
Trim9-201ENSMUST00000110520 Syne1Q6ZWR6 8799 aa3.52□□□□□ -1.85
Trim9-201ENSMUST00000110520 Krtap9-3Q3V2C1 136 aa3.5□□□□□ -1.85
Trim9-201ENSMUST00000110520 Gm10272F7CZ33 110 aa3.5□□□□□ -1.85
Trim9-201ENSMUST00000110520 SspoQ8CG65 4998 aa3.49□□□□□ -1.85
Trim9-201ENSMUST00000110520 2310046K23RikA0A0A6YVW6 87 aa3.49□□□□□ -1.85
Trim9-201ENSMUST00000110520 Gm11569B1AQB1 180 aa3.48□□□□□ -1.85
Trim9-201ENSMUST00000110520 Krtap22-2J3QNX6 67 aa3.47□□□□□ -1.85
Trim9-201ENSMUST00000110520 Sprr2gO70558 76 aa3.43□□□□□ -1.86
Trim9-201ENSMUST00000110520 Lce1hQ9D6R3 140 aa3.43□□□□□ -1.86
Trim9-201ENSMUST00000110520 Krtap4-2B1AQ85 167 aa3.38□□□□□ -1.87
Trim9-201ENSMUST00000110520 Muc16A0A140LJ72 8478 aa3.36□□□□□ -1.87
Trim9-201ENSMUST00000110520 Fsip2A2ARZ3 6995 aa3.34□□□□□ -1.87
Trim9-201ENSMUST00000110520 Gm38119A0A0A6YX29 146 aa3.32□□□□□ -1.88
Trim9-201ENSMUST00000110520 Lce1gQ9D195 139 aa3.3□□□□□ -1.88
Trim9-201ENSMUST00000110520 Gm10100J3QK64 120 aa3.29□□□□□ -1.88
Trim9-201ENSMUST00000110520 Krtap4-6Q3V4B7 195 aa3.29□□□□□ -1.88
Trim9-201ENSMUST00000110520 Lce3bQ9CQM7 98 aa3.28□□□□□ -1.88
Trim9-201ENSMUST00000110520 Muc5bE9Q5I3 4800 aa3.27□□□□□ -1.89
Trim9-201ENSMUST00000110520 Lce3cQ91V05 98 aa3.23□□□□□ -1.89
Trim9-201ENSMUST00000110520 Mt4P47945 62 aa3.19□□□□□ -1.9
Trim9-201ENSMUST00000110520 Krtap4-1Q3UUY3 169 aa3.17□□□□□ -1.9
Trim9-201ENSMUST00000110520 Gm11596B1AQB0 205 aa3.17□□□□□ -1.9
Trim9-201ENSMUST00000110520 Gm10142J3KMP7 120 aa3.16□□□□□ -1.9
Trim9-201ENSMUST00000110520 Lce3eF8VQJ0 98 aa3.16□□□□□ -1.9
Trim9-201ENSMUST00000110520 Lce3fQ6PAI4 98 aa3.16□□□□□ -1.9
Trim9-201ENSMUST00000110520 Lce1dQ9D731 133 aa3.15□□□□□ -1.9
Trim9-201ENSMUST00000110520 Macf1Q9QXZ0 7354 aaKnown RBP3.12□□□□□ -1.91
Trim9-201ENSMUST00000110520 Syne2Q6ZWQ0 6874 aaKnown RBP3.11□□□□□ -1.91
Trim9-201ENSMUST00000110520 Gm11564A2A4L9 201 aa3.1□□□□□ -1.91
Trim9-201ENSMUST00000110520 Gm11563B1AQ90 168 aa3.1□□□□□ -1.91
Retrieved 100 of 22,080 RNA–protein pairs in 193.6 ms