RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Gm40193A0A1B0GT39 78 aa5.5□□□□□ -1.53
Col20a1-201ENSMUST00000108856 Gm10318A0A1W2P728 225 aa5.5□□□□□ -1.53
Col20a1-201ENSMUST00000108856 Hectd4E9Q2E4 4418 aa5.47□□□□□ -1.53
Col20a1-201ENSMUST00000108856 Tnp1P10856 55 aa5.47□□□□□ -1.53
Col20a1-201ENSMUST00000108856 Dnah7aE9Q0T8 4024 aa5.43□□□□□ -1.54
Col20a1-201ENSMUST00000108856 Pkd1O08852 4293 aa5.4□□□□□ -1.54
Col20a1-201ENSMUST00000108856 Ryr3A2AGL3 4863 aa5.4□□□□□ -1.55
Col20a1-201ENSMUST00000108856 SacsQ9JLC8 4582 aa5.4□□□□□ -1.55
Col20a1-201ENSMUST00000108856 Fat1A0A1L1SQU7 4645 aa5.39□□□□□ -1.55
Col20a1-201ENSMUST00000108856 Krtap13-1Q8K198 168 aa5.3□□□□□ -1.56
Col20a1-201ENSMUST00000108856 Gm17402F6Z0L5 76 aa5.29□□□□□ -1.56
Col20a1-201ENSMUST00000108856 Krtap3-1A2A591 98 aa5.28□□□□□ -1.56
Col20a1-201ENSMUST00000108856 Lrp1Q91ZX7 4545 aaKnown RBP5.26□□□□□ -1.57
Col20a1-201ENSMUST00000108856 Fat2Q5F226 4351 aa5.26□□□□□ -1.57
Col20a1-201ENSMUST00000108856 Lce1mQ9CR91 182 aa5.2□□□□□ -1.58
Col20a1-201ENSMUST00000108856 Fat3Q8BNA6 4555 aa5.18□□□□□ -1.58
Col20a1-201ENSMUST00000108856 Ryr2E9Q401 4966 aaKnown RBP5.16□□□□□ -1.58
Col20a1-201ENSMUST00000108856 Mycbp2Q7TPH6 4711 aa5.15□□□□□ -1.59
Col20a1-201ENSMUST00000108856 Gm19402J3QJV4 266 aa5.13□□□□□ -1.59
Col20a1-201ENSMUST00000108856 LorP18165 486 aa5.13□□□□□ -1.59
Col20a1-201ENSMUST00000108856 Gm19668J3QMD1 248 aa5.1□□□□□ -1.59
Col20a1-201ENSMUST00000108856 Dnah8Q91XQ0 4731 aa5.1□□□□□ -1.59
Col20a1-201ENSMUST00000108856 Vps13bQ80TY5 3993 aa5.1□□□□□ -1.59
Col20a1-201ENSMUST00000108856 Pkhd1E9PZ36 4059 aa5.04□□□□□ -1.6
Col20a1-201ENSMUST00000108856 Kiaa1109A2AAE1 5005 aa5.03□□□□□ -1.6
Col20a1-201ENSMUST00000108856 Herc2Q4U2R1 4836 aa5.02□□□□□ -1.61
Col20a1-201ENSMUST00000108856 Krtap1-5A2A590 122 aa4.98□□□□□ -1.61
Col20a1-201ENSMUST00000108856 HydinQ80W93 5154 aa4.97□□□□□ -1.61
Col20a1-201ENSMUST00000108856 Kmt2cQ8BRH4 4903 aa4.96□□□□□ -1.62
Col20a1-201ENSMUST00000108856 Pkhd1l1Q80ZA4 4249 aa4.95□□□□□ -1.62
Col20a1-201ENSMUST00000108856 Abca13Q5SSE9 5034 aa4.93□□□□□ -1.62
Col20a1-201ENSMUST00000108856 Lrp2A2ARV4 4660 aa4.91□□□□□ -1.62
Col20a1-201ENSMUST00000108856 Sprr2kO70562 68 aa4.91□□□□□ -1.62
Col20a1-201ENSMUST00000108856 Prm1P02319 51 aa4.91□□□□□ -1.62
Col20a1-201ENSMUST00000108856 Sprr2a3Q4KL71 83 aa4.83□□□□□ -1.64
Col20a1-201ENSMUST00000108856 Sprr2a1Q9CQK8 83 aa4.83□□□□□ -1.64
Col20a1-201ENSMUST00000108856 Krtap7-1Q9D3I6 87 aa4.83□□□□□ -1.64
Col20a1-201ENSMUST00000108856 Dnhd1D3Z2X2 4750 aa4.81□□□□□ -1.64
Col20a1-201ENSMUST00000108856 Krtap8-1O08633 61 aa4.81□□□□□ -1.64
Col20a1-201ENSMUST00000108856 Birc6O88738 4882 aa4.8□□□□□ -1.64
Col20a1-201ENSMUST00000108856 Gm7735D3YX18 52 aa4.78□□□□□ -1.64
Col20a1-201ENSMUST00000108856 Krtap16-3Q8C1I6 86 aa4.76□□□□□ -1.65
Col20a1-201ENSMUST00000108856 Krtap1-4Q3V2D6 188 aa4.75□□□□□ -1.65
Col20a1-201ENSMUST00000108856 Krtap19-9aF8WH65 55 aa4.74□□□□□ -1.65
Col20a1-201ENSMUST00000108856 4933428G20RikQ9D3X4 101 aa4.72□□□□□ -1.65
Col20a1-201ENSMUST00000108856 Krtap19-3Q925H6 87 aa4.7□□□□□ -1.66
Col20a1-201ENSMUST00000108856 Krtap19-1Q925H2 87 aa4.68□□□□□ -1.66
Col20a1-201ENSMUST00000108856 Gm6358A0A087WPH4 74 aa4.67□□□□□ -1.66
Col20a1-201ENSMUST00000108856 Krtap12-1Q9Z287 130 aa4.66□□□□□ -1.66
Col20a1-201ENSMUST00000108856 Sprr2gO70558 76 aa4.63□□□□□ -1.67
Col20a1-201ENSMUST00000108856 PcloQ9QYX7 5068 aa4.59□□□□□ -1.67
Col20a1-201ENSMUST00000108856 Gm9789Q8BIG3 52 aa4.59□□□□□ -1.67
Col20a1-201ENSMUST00000108856 Mdn1A2ANY6 5589 aaKnown RBP4.55□□□□□ -1.68
Col20a1-201ENSMUST00000108856 Krtap9-5A2A5X3 358 aa4.51□□□□□ -1.69
Col20a1-201ENSMUST00000108856 Krtap19-9bQ99NG9 58 aa4.51□□□□□ -1.69
Col20a1-201ENSMUST00000108856 Herc1E9PZP8 4859 aa4.47□□□□□ -1.69
Col20a1-201ENSMUST00000108856 4932415D10RikA0A1W2P6U8 4986 aa4.47□□□□□ -1.69
Col20a1-201ENSMUST00000108856 Krtap1-3A2A588 173 aa4.46□□□□□ -1.7
Col20a1-201ENSMUST00000108856 Gm10061D3Z714 54 aa4.38□□□□□ -1.71
Col20a1-201ENSMUST00000108856 Lce1jD3YUU5 139 aa4.37□□□□□ -1.71
Col20a1-201ENSMUST00000108856 Gm11569B1AQB1 180 aa4.36□□□□□ -1.71
Col20a1-201ENSMUST00000108856 Krtap4-2B1AQ85 167 aa4.35□□□□□ -1.71
Col20a1-201ENSMUST00000108856 Ubr4A2AN08 5180 aa4.31□□□□□ -1.72
Col20a1-201ENSMUST00000108856 2310046K23RikA0A0A6YVW6 87 aa4.3□□□□□ -1.72
Col20a1-201ENSMUST00000108856 Ush2AQ2QI47 5193 aa4.28□□□□□ -1.72
Col20a1-201ENSMUST00000108856 Gm38119A0A0A6YX29 146 aa4.27□□□□□ -1.73
Col20a1-201ENSMUST00000108856 ZanO88799 5376 aa4.27□□□□□ -1.73
Col20a1-201ENSMUST00000108856 Krtap19-2Q925I0 141 aa4.26□□□□□ -1.73
Col20a1-201ENSMUST00000108856 Rnf213E9Q555 5152 aaKnown RBP4.26□□□□□ -1.73
Col20a1-201ENSMUST00000108856 Mt2P02798 61 aa4.22□□□□□ -1.73
Col20a1-201ENSMUST00000108856 Krtap22-2J3QNX6 67 aa4.21□□□□□ -1.74
Col20a1-201ENSMUST00000108856 Lce1gQ9D195 139 aa4.2□□□□□ -1.74
Col20a1-201ENSMUST00000108856 Fat4Q2PZL6 4981 aa4.2□□□□□ -1.74
Col20a1-201ENSMUST00000108856 Hmcn2A2AJ76 5100 aa4.17□□□□□ -1.74
Col20a1-201ENSMUST00000108856 Lce3bQ9CQM7 98 aa4.15□□□□□ -1.75
Col20a1-201ENSMUST00000108856 Krtap4-6Q3V4B7 195 aa4.14□□□□□ -1.75
Col20a1-201ENSMUST00000108856 Syne1Q6ZWR6 8799 aa4.12□□□□□ -1.75
Col20a1-201ENSMUST00000108856 Lce1iQ9D6P5 149 aa4.07□□□□□ -1.76
Col20a1-201ENSMUST00000108856 Mt4P47945 62 aa4.06□□□□□ -1.76
Col20a1-201ENSMUST00000108856 Krtap17-1A2A5X6 109 aa4.05□□□□□ -1.76
Col20a1-201ENSMUST00000108856 Gm10272F7CZ33 110 aa4.05□□□□□ -1.76
Col20a1-201ENSMUST00000108856 Lce1a2Q9D1K4 149 aa4.02□□□□□ -1.77
Col20a1-201ENSMUST00000108856 Gm11596B1AQB0 205 aa4.01□□□□□ -1.77
Col20a1-201ENSMUST00000108856 Gm10100J3QK64 120 aa4.01□□□□□ -1.77
Col20a1-201ENSMUST00000108856 Sprr2iO70560 76 aa4.01□□□□□ -1.77
Col20a1-201ENSMUST00000108856 Lce3cQ91V05 98 aa3.99□□□□□ -1.77
Col20a1-201ENSMUST00000108856 Krtap4-1Q3UUY3 169 aa3.98□□□□□ -1.77
Col20a1-201ENSMUST00000108856 Lce1lQ9D1G7 135 aa3.98□□□□□ -1.77
Col20a1-201ENSMUST00000108856 Fsip2A2ARZ3 6995 aa3.96□□□□□ -1.78
Col20a1-201ENSMUST00000108856 Krtap9-3Q3V2C1 136 aa3.95□□□□□ -1.78
Col20a1-201ENSMUST00000108856 Gm11564A2A4L9 201 aa3.91□□□□□ -1.78
Col20a1-201ENSMUST00000108856 Gm11563B1AQ90 168 aa3.91□□□□□ -1.78
Col20a1-201ENSMUST00000108856 Gm11595B1AQA7 289 aa3.91□□□□□ -1.78
Col20a1-201ENSMUST00000108856 Krtap4-8B1AQA8 209 aa3.91□□□□□ -1.78
Col20a1-201ENSMUST00000108856 Krtap4-9B1AQA9 244 aa3.89□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Lce1bQ9D149 137 aa3.88□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Muc5bE9Q5I3 4800 aa3.88□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Syne2Q6ZWQ0 6874 aaKnown RBP3.88□□□□□ -1.79
Col20a1-201ENSMUST00000108856 Gm10142J3KMP7 120 aa3.86□□□□□ -1.79
Col20a1-201ENSMUST00000108856 SspoQ8CG65 4998 aa3.85□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 148.4 ms