RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Cox6b2Q80ZN9 88 aa6.16□□□□□ -1.42
H2afv-201ENSMUST00000093346 Gm17606F6ZL36 78 aa6.15□□□□□ -1.42
H2afv-201ENSMUST00000093346 B930094E09RikQ8C4T2 136 aa6.14□□□□□ -1.43
H2afv-201ENSMUST00000093346 Lce1gQ9D195 139 aa6.14□□□□□ -1.43
H2afv-201ENSMUST00000093346 SptssbQ925E8 76 aa6.13□□□□□ -1.43
H2afv-201ENSMUST00000093346 Syne2Q6ZWQ0 6874 aaKnown RBP6.08□□□□□ -1.44
H2afv-201ENSMUST00000093346 Krtap19-2Q925I0 141 aa6.08□□□□□ -1.44
H2afv-201ENSMUST00000093346 Coa5Q99M07 74 aa6.08□□□□□ -1.44
H2afv-201ENSMUST00000093346 Krtap12-1Q9Z287 130 aa6.06□□□□□ -1.44
H2afv-201ENSMUST00000093346 Muc5bE9Q5I3 4800 aa6.05□□□□□ -1.44
H2afv-201ENSMUST00000093346 BC029722A0A0N4SW31 51 aa6.05□□□□□ -1.44
H2afv-201ENSMUST00000093346 Krtap9-5A2A5X3 358 aa6.05□□□□□ -1.44
H2afv-201ENSMUST00000093346 Lce1jD3YUU5 139 aa6.03□□□□□ -1.44
H2afv-201ENSMUST00000093346 Gm20537G3UYK7 97 aa6.03□□□□□ -1.44
H2afv-201ENSMUST00000093346 Gm11555B1AQ89 175 aa5.99□□□□□ -1.45
H2afv-201ENSMUST00000093346 Gm10382Q3V0T5 144 aa5.97□□□□□ -1.45
H2afv-201ENSMUST00000093346 CriptO70333 101 aa5.96□□□□□ -1.46
H2afv-201ENSMUST00000093346 Pla2g10Q9QXX3 151 aa5.96□□□□□ -1.46
H2afv-201ENSMUST00000093346 Smlr1J3QMJ4 66 aa5.95□□□□□ -1.46
H2afv-201ENSMUST00000093346 Mdn1A2ANY6 5589 aaKnown RBP5.94□□□□□ -1.46
H2afv-201ENSMUST00000093346 Smim20D3Z7Q2 69 aa5.94□□□□□ -1.46
H2afv-201ENSMUST00000093346 Krtap19-9aF8WH65 55 aa5.93□□□□□ -1.46
H2afv-201ENSMUST00000093346 Gm11596B1AQB0 205 aa5.91□□□□□ -1.46
H2afv-201ENSMUST00000093346 Prm2P07978 107 aa5.88□□□□□ -1.47
H2afv-201ENSMUST00000093346 Spink7Q6IE32 76 aa5.88□□□□□ -1.47
H2afv-201ENSMUST00000093346 Limd2Q8BGB5 128 aa5.88□□□□□ -1.47
H2afv-201ENSMUST00000093346 Gm20661K7N787 53 aa5.86□□□□□ -1.47
H2afv-201ENSMUST00000093346 Krtap4-6Q3V4B7 195 aa5.86□□□□□ -1.47
H2afv-201ENSMUST00000093346 Pet100P0DJE0 76 aa5.83□□□□□ -1.48
H2afv-201ENSMUST00000093346 SnurfQ9WU12 71 aa5.8□□□□□ -1.48
H2afv-201ENSMUST00000093346 Gm6358A0A087WPH4 74 aa5.79□□□□□ -1.48
H2afv-201ENSMUST00000093346 H2al1aQ5M8Q2 105 aa5.78□□□□□ -1.48
H2afv-201ENSMUST00000093346 H2al1eQ810S6 105 aa5.78□□□□□ -1.48
H2afv-201ENSMUST00000093346 Tmem258P61166 79 aa5.77□□□□□ -1.49
H2afv-201ENSMUST00000093346 Krtap4-1Q3UUY3 169 aa5.76□□□□□ -1.49
H2afv-201ENSMUST00000093346 Cdc42se1Q8BHL7 80 aa5.76□□□□□ -1.49
H2afv-201ENSMUST00000093346 Sec61gP60060 68 aa5.72□□□□□ -1.49
H2afv-201ENSMUST00000093346 Uqcr11Q9CPX8 56 aa5.71□□□□□ -1.5
H2afv-201ENSMUST00000093346 Serp1Q9Z1W5 66 aa5.7□□□□□ -1.5
H2afv-201ENSMUST00000093346 SvipQ3UZP4 77 aa5.69□□□□□ -1.5
H2afv-201ENSMUST00000093346 Gm19935A0A1B0GSF9 52 aa5.68□□□□□ -1.5
H2afv-201ENSMUST00000093346 Prr13Q9CQJ5 137 aa5.67□□□□□ -1.5
H2afv-201ENSMUST00000093346 Gm10197F6QEY5 67 aa5.66□□□□□ -1.5
H2afv-201ENSMUST00000093346 Phxr4P15974 95 aa5.66□□□□□ -1.5
H2afv-201ENSMUST00000093346 Lce1iQ9D6P5 149 aa5.65□□□□□ -1.5
H2afv-201ENSMUST00000093346 H2al1bA0A087WP11 105 aa5.64□□□□□ -1.51
H2afv-201ENSMUST00000093346 Gm11564A2A4L9 201 aa5.63□□□□□ -1.51
H2afv-201ENSMUST00000093346 Gm11563B1AQ90 168 aa5.63□□□□□ -1.51
H2afv-201ENSMUST00000093346 Gm11595B1AQA7 289 aa5.63□□□□□ -1.51
H2afv-201ENSMUST00000093346 Krtap4-8B1AQA8 209 aa5.63□□□□□ -1.51
H2afv-201ENSMUST00000093346 Gm9955Q8CEJ8 102 aa5.63□□□□□ -1.51
H2afv-201ENSMUST00000093346 Sprr2a3Q4KL71 83 aa5.59□□□□□ -1.51
H2afv-201ENSMUST00000093346 Sprr2a1Q9CQK8 83 aa5.59□□□□□ -1.51
H2afv-201ENSMUST00000093346 Gm17402F6Z0L5 76 aa5.58□□□□□ -1.52
H2afv-201ENSMUST00000093346 Pcp4P63054 62 aa5.58□□□□□ -1.52
H2afv-201ENSMUST00000093346 Ndufb1P0DN34 57 aa5.56□□□□□ -1.52
H2afv-201ENSMUST00000093346 Lce1a2Q9D1K4 149 aa5.55□□□□□ -1.52
H2afv-201ENSMUST00000093346 Mt2P02798 61 aa5.54□□□□□ -1.52
H2afv-201ENSMUST00000093346 Brk1Q91VR8 75 aa5.53□□□□□ -1.52
H2afv-201ENSMUST00000093346 Krtap4-9B1AQA9 244 aa5.46□□□□□ -1.54
H2afv-201ENSMUST00000093346 Krtap8-1O08633 61 aa5.45□□□□□ -1.54
H2afv-201ENSMUST00000093346 Fsip2A2ARZ3 6995 aa5.42□□□□□ -1.54
H2afv-201ENSMUST00000093346 Krtap9-3Q3V2C1 136 aa5.41□□□□□ -1.54
H2afv-201ENSMUST00000093346 SmcpP15265 143 aa5.39□□□□□ -1.55
H2afv-201ENSMUST00000093346 Mt4P47945 62 aa5.39□□□□□ -1.55
H2afv-201ENSMUST00000093346 Gm19668J3QMD1 248 aa5.37□□□□□ -1.55
H2afv-201ENSMUST00000093346 Rps28P62858 69 aaKnown RBP5.36□□□□□ -1.55
H2afv-201ENSMUST00000093346 Krtap22-2J3QNX6 67 aa5.29□□□□□ -1.56
H2afv-201ENSMUST00000093346 Krtap4-13Q9D7P3 165 aa5.25□□□□□ -1.57
H2afv-201ENSMUST00000093346 Gm21887J3QQ04 176 aa5.24□□□□□ -1.57
H2afv-201ENSMUST00000093346 Lce1bQ9D149 137 aa5.24□□□□□ -1.57
H2afv-201ENSMUST00000093346 Krtap6-3A0A087WQL6 57 aa5.21□□□□□ -1.58
H2afv-201ENSMUST00000093346 Camk2n1Q6QWF9 78 aa5.19□□□□□ -1.58
H2afv-201ENSMUST00000093346 Sprr2kO70562 68 aa5.18□□□□□ -1.58
H2afv-201ENSMUST00000093346 H2al1kJ3QP08 105 aa5.17□□□□□ -1.58
H2afv-201ENSMUST00000093346 Krtap19-9bQ99NG9 58 aa5.15□□□□□ -1.59
H2afv-201ENSMUST00000093346 Gm38119A0A0A6YX29 146 aa5.12□□□□□ -1.59
H2afv-201ENSMUST00000093346 Gm3880A0A1B0GSB3 72 aa5.1□□□□□ -1.59
H2afv-201ENSMUST00000093346 H2al1mQ9DAD9 105 aa5.1□□□□□ -1.59
H2afv-201ENSMUST00000093346 2300003K06RikA2A4M0 262 aa5.09□□□□□ -1.59
H2afv-201ENSMUST00000093346 Sox16Q62247 57 aa5.03□□□□□ -1.6
H2afv-201ENSMUST00000093346 Lce1lQ9D1G7 135 aa5.03□□□□□ -1.6
H2afv-201ENSMUST00000093346 Gm10337F7DEP7 55 aa5.02□□□□□ -1.61
H2afv-201ENSMUST00000093346 Krtap4-7Q9D732 168 aa5.01□□□□□ -1.61
H2afv-201ENSMUST00000093346 Ndufs5Q99LY9 106 aa4.96□□□□□ -1.62
H2afv-201ENSMUST00000093346 4933415A04RikQ9D443 101 aa4.94□□□□□ -1.62
H2afv-201ENSMUST00000093346 Gm12216A0A1W2P827 62 aa4.92□□□□□ -1.62
H2afv-201ENSMUST00000093346 Sprr2gO70558 76 aa4.86□□□□□ -1.63
H2afv-201ENSMUST00000093346 Romo1P60603 79 aa4.81□□□□□ -1.64
H2afv-201ENSMUST00000093346 Lce1a1Q9CQH5 143 aa4.77□□□□□ -1.65
H2afv-201ENSMUST00000093346 Krtap20-2E9Q0A8 60 aa4.76□□□□□ -1.65
H2afv-201ENSMUST00000093346 Gm3646F6S692 53 aa4.76□□□□□ -1.65
H2afv-201ENSMUST00000093346 Lce1hQ9D6R3 140 aa4.71□□□□□ -1.66
H2afv-201ENSMUST00000093346 Lce1dQ9D731 133 aa4.69□□□□□ -1.66
H2afv-201ENSMUST00000093346 Krtap7-1Q9D3I6 87 aa4.68□□□□□ -1.66
H2afv-201ENSMUST00000093346 A0A1Y7VJH8 109 aa4.65□□□□□ -1.67
H2afv-201ENSMUST00000093346 2310046K23RikA0A0A6YVW6 87 aa4.64□□□□□ -1.67
H2afv-201ENSMUST00000093346 Lce1eQ9D139 143 aa4.62□□□□□ -1.67
H2afv-201ENSMUST00000093346 Sprr2iO70560 76 aa4.59□□□□□ -1.67
H2afv-201ENSMUST00000093346 Krtap5-2Q9D5Z7 189 aa4.57□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms