RNA–Protein interactions for RNA: ENSMUST00000090006.11

Itgb1-201, Transcript of Integrin beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Itgb1, Length 3,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb1-201ENSMUST00000090006 Gm17402F6Z0L5 76 aa6.76□□□□□ -1.33
Itgb1-201ENSMUST00000090006 Lrp1Q91ZX7 4545 aaKnown RBP6.74□□□□□ -1.33
Itgb1-201ENSMUST00000090006 Krtap13-1Q8K198 168 aa6.73□□□□□ -1.33
Itgb1-201ENSMUST00000090006 Dync2h1Q45VK7 4306 aa6.69□□□□□ -1.34
Itgb1-201ENSMUST00000090006 Tnp1P10856 55 aa6.69□□□□□ -1.34
Itgb1-201ENSMUST00000090006 TnxbO35452 4006 aa6.68□□□□□ -1.34
Itgb1-201ENSMUST00000090006 Gm19402J3QJV4 266 aa6.66□□□□□ -1.34
Itgb1-201ENSMUST00000090006 SacsQ9JLC8 4582 aa6.64□□□□□ -1.35
Itgb1-201ENSMUST00000090006 Pkd1O08852 4293 aa6.62□□□□□ -1.35
Itgb1-201ENSMUST00000090006 Krtap19-5O08632 62 aa6.6□□□□□ -1.35
Itgb1-201ENSMUST00000090006 Dync1h1Q9JHU4 4644 aaKnown RBP6.58□□□□□ -1.36
Itgb1-201ENSMUST00000090006 Gm10318A0A1W2P728 225 aa6.56□□□□□ -1.36
Itgb1-201ENSMUST00000090006 Fat3Q8BNA6 4555 aa6.45□□□□□ -1.38
Itgb1-201ENSMUST00000090006 Fat2Q5F226 4351 aa6.44□□□□□ -1.38
Itgb1-201ENSMUST00000090006 Sprr2a3Q4KL71 83 aa6.42□□□□□ -1.38
Itgb1-201ENSMUST00000090006 Sprr2a1Q9CQK8 83 aa6.42□□□□□ -1.38
Itgb1-201ENSMUST00000090006 Ryr3A2AGL3 4863 aa6.4□□□□□ -1.38
Itgb1-201ENSMUST00000090006 Pkhd1E9PZ36 4059 aa6.4□□□□□ -1.38
Itgb1-201ENSMUST00000090006 Fat1A0A1L1SQU7 4645 aa6.38□□□□□ -1.39
Itgb1-201ENSMUST00000090006 Crct1Q6PAI5 102 aa6.36□□□□□ -1.39
Itgb1-201ENSMUST00000090006 Pkhd1l1Q80ZA4 4249 aa6.28□□□□□ -1.4
Itgb1-201ENSMUST00000090006 Mycbp2Q7TPH6 4711 aa6.25□□□□□ -1.41
Itgb1-201ENSMUST00000090006 Krtap1-5A2A590 122 aa6.24□□□□□ -1.41
Itgb1-201ENSMUST00000090006 Ryr1E9PZQ0 5035 aa6.15□□□□□ -1.42
Itgb1-201ENSMUST00000090006 Abca13Q5SSE9 5034 aa6.09□□□□□ -1.44
Itgb1-201ENSMUST00000090006 Lrp2A2ARV4 4660 aa6.04□□□□□ -1.44
Itgb1-201ENSMUST00000090006 HydinQ80W93 5154 aa6□□□□□ -1.45
Itgb1-201ENSMUST00000090006 Dnah8Q91XQ0 4731 aa6□□□□□ -1.45
Itgb1-201ENSMUST00000090006 Kmt2cQ8BRH4 4903 aa5.94□□□□□ -1.46
Itgb1-201ENSMUST00000090006 Krtap1-4Q3V2D6 188 aa5.94□□□□□ -1.46
Itgb1-201ENSMUST00000090006 Kiaa1109A2AAE1 5005 aa5.89□□□□□ -1.47
Itgb1-201ENSMUST00000090006 Krtap16-3Q8C1I6 86 aa5.78□□□□□ -1.48
Itgb1-201ENSMUST00000090006 Ryr2E9Q401 4966 aaKnown RBP5.76□□□□□ -1.49
Itgb1-201ENSMUST00000090006 4933428G20RikQ9D3X4 101 aa5.75□□□□□ -1.49
Itgb1-201ENSMUST00000090006 Herc2Q4U2R1 4836 aa5.74□□□□□ -1.49
Itgb1-201ENSMUST00000090006 Krtap19-9aF8WH65 55 aa5.69□□□□□ -1.5
Itgb1-201ENSMUST00000090006 Dnhd1D3Z2X2 4750 aa5.68□□□□□ -1.5
Itgb1-201ENSMUST00000090006 2310046K23RikA0A0A6YVW6 87 aa5.66□□□□□ -1.5
Itgb1-201ENSMUST00000090006 Krtap12-1Q9Z287 130 aa5.62□□□□□ -1.51
Itgb1-201ENSMUST00000090006 Krtap19-3Q925H6 87 aa5.62□□□□□ -1.51
Itgb1-201ENSMUST00000090006 Krtap19-9bQ99NG9 58 aa5.62□□□□□ -1.51
Itgb1-201ENSMUST00000090006 Krtap19-1Q925H2 87 aa5.61□□□□□ -1.51
Itgb1-201ENSMUST00000090006 PcloQ9QYX7 5068 aa5.53□□□□□ -1.52
Itgb1-201ENSMUST00000090006 Krtap8-1O08633 61 aa5.51□□□□□ -1.53
Itgb1-201ENSMUST00000090006 Lce1jD3YUU5 139 aa5.5□□□□□ -1.53
Itgb1-201ENSMUST00000090006 LorP18165 486 aa5.45□□□□□ -1.54
Itgb1-201ENSMUST00000090006 Ubr4A2AN08 5180 aa5.44□□□□□ -1.54
Itgb1-201ENSMUST00000090006 Fat4Q2PZL6 4981 aa5.37□□□□□ -1.55
Itgb1-201ENSMUST00000090006 Birc6O88738 4882 aa5.31□□□□□ -1.56
Itgb1-201ENSMUST00000090006 Herc1E9PZP8 4859 aa5.26□□□□□ -1.57
Itgb1-201ENSMUST00000090006 Krtap9-3Q3V2C1 136 aa5.25□□□□□ -1.57
Itgb1-201ENSMUST00000090006 ZanO88799 5376 aa5.25□□□□□ -1.57
Itgb1-201ENSMUST00000090006 Gm6358A0A087WPH4 74 aa5.18□□□□□ -1.58
Itgb1-201ENSMUST00000090006 Lce1hQ9D6R3 140 aa5.16□□□□□ -1.58
Itgb1-201ENSMUST00000090006 Hmcn2A2AJ76 5100 aa5.15□□□□□ -1.58
Itgb1-201ENSMUST00000090006 Ush2AQ2QI47 5193 aa5.15□□□□□ -1.59
Itgb1-201ENSMUST00000090006 4932415D10RikA0A1W2P6U8 4986 aa5.14□□□□□ -1.59
Itgb1-201ENSMUST00000090006 Krtap9-5A2A5X3 358 aa5.13□□□□□ -1.59
Itgb1-201ENSMUST00000090006 Syne1Q6ZWR6 8799 aa5.12□□□□□ -1.59
Itgb1-201ENSMUST00000090006 Krtap17-1A2A5X6 109 aa5.11□□□□□ -1.59
Itgb1-201ENSMUST00000090006 Lce1dQ9D731 133 aa5.1□□□□□ -1.59
Itgb1-201ENSMUST00000090006 Lce1iQ9D6P5 149 aa5.08□□□□□ -1.6
Itgb1-201ENSMUST00000090006 Gm10100J3QK64 120 aa5.07□□□□□ -1.6
Itgb1-201ENSMUST00000090006 Lce1a2Q9D1K4 149 aa5.06□□□□□ -1.6
Itgb1-201ENSMUST00000090006 Rnf213E9Q555 5152 aaKnown RBP5.05□□□□□ -1.6
Itgb1-201ENSMUST00000090006 Sprr2gO70558 76 aa5.05□□□□□ -1.6
Itgb1-201ENSMUST00000090006 Krtap1-3A2A588 173 aa5.02□□□□□ -1.61
Itgb1-201ENSMUST00000090006 Gm10272F7CZ33 110 aa5.02□□□□□ -1.61
Itgb1-201ENSMUST00000090006 Krtap19-2Q925I0 141 aa5.01□□□□□ -1.61
Itgb1-201ENSMUST00000090006 Gm18596A0A1W2P860 280 aa4.95□□□□□ -1.62
Itgb1-201ENSMUST00000090006 Mt2P02798 61 aa4.94□□□□□ -1.62
Itgb1-201ENSMUST00000090006 Gm11938Q9D3H4 131 aa4.93□□□□□ -1.62
Itgb1-201ENSMUST00000090006 Gm10142J3KMP7 120 aa4.93□□□□□ -1.62
Itgb1-201ENSMUST00000090006 Lce3bQ9CQM7 98 aa4.9□□□□□ -1.63
Itgb1-201ENSMUST00000090006 Lce1eQ9D139 143 aa4.85□□□□□ -1.63
Itgb1-201ENSMUST00000090006 Lce3cQ91V05 98 aa4.79□□□□□ -1.64
Itgb1-201ENSMUST00000090006 Krtap22-2J3QNX6 67 aa4.77□□□□□ -1.65
Itgb1-201ENSMUST00000090006 Sprr2dO70555 85 aa4.76□□□□□ -1.65
Itgb1-201ENSMUST00000090006 Mdn1A2ANY6 5589 aaKnown RBP4.76□□□□□ -1.65
Itgb1-201ENSMUST00000090006 Lce1mQ9CR91 182 aa4.75□□□□□ -1.65
Itgb1-201ENSMUST00000090006 Lce3dE9Q8V1 98 aa4.74□□□□□ -1.65
Itgb1-201ENSMUST00000090006 Krtap31-1Q9D644 177 aa4.74□□□□□ -1.65
Itgb1-201ENSMUST00000090006 Muc16A0A140LJ72 8478 aa4.68□□□□□ -1.66
Itgb1-201ENSMUST00000090006 Lce1cQ9D1C5 147 aa4.66□□□□□ -1.66
Itgb1-201ENSMUST00000090006 SspoQ8CG65 4998 aa4.6□□□□□ -1.67
Itgb1-201ENSMUST00000090006 Lce3eF8VQJ0 98 aa4.6□□□□□ -1.67
Itgb1-201ENSMUST00000090006 Lce3fQ6PAI4 98 aa4.6□□□□□ -1.67
Itgb1-201ENSMUST00000090006 Sprr2iO70560 76 aa4.59□□□□□ -1.68
Itgb1-201ENSMUST00000090006 Lce3aQ497I5 98 aa4.58□□□□□ -1.68
Itgb1-201ENSMUST00000090006 Krtap19-4Q925H7 84 aa4.55□□□□□ -1.68
Itgb1-201ENSMUST00000090006 Gm9789Q8BIG3 52 aa4.51□□□□□ -1.69
Itgb1-201ENSMUST00000090006 Lce1fB9EJP6 147 aa4.49□□□□□ -1.69
Itgb1-201ENSMUST00000090006 Lce1a1Q9CQH5 143 aa4.49□□□□□ -1.69
Itgb1-201ENSMUST00000090006 Sprr2fO70557 76 aa4.49□□□□□ -1.69
Itgb1-201ENSMUST00000090006 Krtap4-16Q91W93 202 aa4.42□□□□□ -1.7
Itgb1-201ENSMUST00000090006 Gm7735D3YX18 52 aa4.4□□□□□ -1.7
Itgb1-201ENSMUST00000090006 Gm11562A0PK51 136 aa4.4□□□□□ -1.71
Itgb1-201ENSMUST00000090006 Prm1P02319 51 aa4.37□□□□□ -1.71
Itgb1-201ENSMUST00000090006 ObscnA2AAJ9 8891 aaKnown RBP4.34□□□□□ -1.72
Itgb1-201ENSMUST00000090006 Sprr2hO70559 108 aa4.32□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 83.9 ms