RNA–Protein interactions for RNA: ENSMUST00000090006.11

Itgb1-201, Transcript of Integrin beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Itgb1, Length 3,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb1-201ENSMUST00000090006 Rpgrip1Q9EPQ2 1331 aa24.55■■□□□ 1.52
Itgb1-201ENSMUST00000090006 Rhox8Q6VSS7 320 aa24.42■■□□□ 1.5
Itgb1-201ENSMUST00000090006 Ehmt2Q9Z148 1263 aaKnown RBP23.85■■□□□ 1.41
Itgb1-201ENSMUST00000090006 Acin1Q9JIX8 1338 aaKnown RBP23.48■■□□□ 1.35
Itgb1-201ENSMUST00000090006 Pcgf6Q99NA9 353 aa23.34■■□□□ 1.33
Itgb1-201ENSMUST00000090006 Las1lA2BE28 776 aaKnown RBP23.07■■□□□ 1.28
Itgb1-201ENSMUST00000090006 NischQ80TM9 1593 aa22.81■■□□□ 1.24
Itgb1-201ENSMUST00000090006 Supt5hO55201 1082 aaKnown RBP22.69■■□□□ 1.22
Itgb1-201ENSMUST00000090006 Zeb1Q64318 1117 aa22.67■■□□□ 1.22
Itgb1-201ENSMUST00000090006 Ccdc180J3QNE4 1664 aa22.62■■□□□ 1.21
Itgb1-201ENSMUST00000090006 Neurod1Q60867 357 aa22.49■■□□□ 1.19
Itgb1-201ENSMUST00000090006 Rtl1Q7M732 1744 aa22.35■■□□□ 1.17
Itgb1-201ENSMUST00000090006 CenpbP27790 599 aa22.3■■□□□ 1.16
Itgb1-201ENSMUST00000090006 Ccdc136Q3TVA9 1136 aa22.24■■□□□ 1.15
Itgb1-201ENSMUST00000090006 Cngb1E1AZ71 1325 aa22.22■■□□□ 1.15
Itgb1-201ENSMUST00000090006 Wdr66E9Q743 1299 aa22.16■■□□□ 1.14
Itgb1-201ENSMUST00000090006 Myt1Q8CFC2 1127 aa22.08■■□□□ 1.13
Itgb1-201ENSMUST00000090006 HrcG5E8J6 738 aa22.07■■□□□ 1.12
Itgb1-201ENSMUST00000090006 Trim41Q5NCC3 630 aa22.04■■□□□ 1.12
Itgb1-201ENSMUST00000090006 Csrnp3P59055 597 aa21.94■■□□□ 1.1
Itgb1-201ENSMUST00000090006 1700123L14RikQ3V2K7 440 aa21.92■■□□□ 1.1
Itgb1-201ENSMUST00000090006 DiexfQ8BTT6 772 aaKnown RBP21.9■■□□□ 1.1
Itgb1-201ENSMUST00000090006 NefmP08553 848 aa21.87■■□□□ 1.09
Itgb1-201ENSMUST00000090006 Dcaf1Q80TR8 1506 aa21.82■■□□□ 1.08
Itgb1-201ENSMUST00000090006 Cdk11bP24788 784 aaKnown RBP21.76■■□□□ 1.07
Itgb1-201ENSMUST00000090006 Gab3Q8BSM5 595 aa21.75■■□□□ 1.07
Itgb1-201ENSMUST00000090006 Abcc9P70170 1546 aa21.74■■□□□ 1.07
Itgb1-201ENSMUST00000090006 Anks4bQ8K3X6 423 aa21.73■■□□□ 1.07
Itgb1-201ENSMUST00000090006 Sall2Q9QX96 1004 aa21.72■■□□□ 1.07
Itgb1-201ENSMUST00000090006 Gm38655A0A286YDK6 273 aa21.68■■□□□ 1.06
Itgb1-201ENSMUST00000090006 Nop58Q6DFW4 536 aaKnown RBP21.63■■□□□ 1.05
Itgb1-201ENSMUST00000090006 Ppargc1bQ8VHJ7 1014 aa21.63■■□□□ 1.05
Itgb1-201ENSMUST00000090006 Aplp2Q06335 707 aa21.5■■□□□ 1.03
Itgb1-201ENSMUST00000090006 Mier1Q5UAK0 511 aa21.45■■□□□ 1.02
Itgb1-201ENSMUST00000090006 UbtfP25976 765 aaKnown RBP21.3■■□□□ 1
Itgb1-201ENSMUST00000090006 Bcl11aQ9QYE3 773 aa21.25■□□□□ 0.99
Itgb1-201ENSMUST00000090006 Pelp1Q9DBD5 1123 aaKnown RBP21.21■□□□□ 0.99
Itgb1-201ENSMUST00000090006 Zcchc6Q5BLK4 1491 aaKnown RBP21.15■□□□□ 0.98
Itgb1-201ENSMUST00000090006 Amer1Q7TS75 1132 aa21.11■□□□□ 0.97
Itgb1-201ENSMUST00000090006 ClspnQ80YR7 1315 aa21.1■□□□□ 0.97
Itgb1-201ENSMUST00000090006 Ttbk1Q6PCN3 1308 aa21.03■□□□□ 0.96
Itgb1-201ENSMUST00000090006 Aebp2Q9Z248 504 aaKnown RBP21.02■□□□□ 0.96
Itgb1-201ENSMUST00000090006 Abcc8B2RUS7 1588 aa21.02■□□□□ 0.96
Itgb1-201ENSMUST00000090006 Fam71e1A1L3C1 212 aa21.02■□□□□ 0.96
Itgb1-201ENSMUST00000090006 Mapk8ip2Q9ERE9 830 aa21.02■□□□□ 0.96
Itgb1-201ENSMUST00000090006 Tnnt3Q9QZ47 272 aa20.98■□□□□ 0.95
Itgb1-201ENSMUST00000090006 TonslQ6NZL6 1363 aa20.85■□□□□ 0.93
Itgb1-201ENSMUST00000090006 Myt1lP97500 1187 aa20.83■□□□□ 0.92
Itgb1-201ENSMUST00000090006 Cep164Q5DU05 1446 aa20.79■□□□□ 0.92
Itgb1-201ENSMUST00000090006 SafbD3YXK2 937 aaKnown RBP20.76■□□□□ 0.91
Itgb1-201ENSMUST00000090006 Anp32aO35381 247 aa20.75■□□□□ 0.91
Itgb1-201ENSMUST00000090006 Slc24a1Q91WD8 1130 aa20.72■□□□□ 0.91
Itgb1-201ENSMUST00000090006 Ap3b1Q9Z1T1 1105 aa20.71■□□□□ 0.91
Itgb1-201ENSMUST00000090006 Stra8P70278 393 aa20.69■□□□□ 0.9
Itgb1-201ENSMUST00000090006 Esf1Q3V1V3 845 aaKnown RBP20.69■□□□□ 0.9
Itgb1-201ENSMUST00000090006 PrkcshO08795 521 aa20.67■□□□□ 0.9
Itgb1-201ENSMUST00000090006 Rtl5Q5DTT4 599 aa20.67■□□□□ 0.9
Itgb1-201ENSMUST00000090006 Chic1Q8CBW7 227 aa20.63■□□□□ 0.89
Itgb1-201ENSMUST00000090006 Hnrnpul2Q00PI9 745 aaKnown RBP20.63■□□□□ 0.89
Itgb1-201ENSMUST00000090006 Gm35339A0A140LHH9 1649 aa20.56■□□□□ 0.88
Itgb1-201ENSMUST00000090006 Ifnlr1Q8CGK5 535 aa20.49■□□□□ 0.87
Itgb1-201ENSMUST00000090006 Npm2Q80W85 207 aa20.46■□□□□ 0.87
Itgb1-201ENSMUST00000090006 Eif5bQ05D44 1216 aaKnown RBP20.4■□□□□ 0.86
Itgb1-201ENSMUST00000090006 Eid3Q3V124 375 aa20.37■□□□□ 0.85
Itgb1-201ENSMUST00000090006 Calr4Q3TQS0 420 aa20.33■□□□□ 0.85
Itgb1-201ENSMUST00000090006 NclP09405 707 aaKnown RBP20.33■□□□□ 0.84
Itgb1-201ENSMUST00000090006 4933416C03RikQ3V063 378 aa20.32■□□□□ 0.84
Itgb1-201ENSMUST00000090006 Plekhg3Q4VAC9 1341 aa20.25■□□□□ 0.83
Itgb1-201ENSMUST00000090006 Ppp4r2Q0VGB7 417 aa20.24■□□□□ 0.83
Itgb1-201ENSMUST00000090006 Ube2uB1AUC4 352 aa20.21■□□□□ 0.83
Itgb1-201ENSMUST00000090006 Rsf1E9PWW9 1441 aaKnown RBP20.13■□□□□ 0.81
Itgb1-201ENSMUST00000090006 Wdr43Q6ZQL4 677 aaKnown RBP20.08■□□□□ 0.81
Itgb1-201ENSMUST00000090006 Rb1cc1Q9ESK9 1588 aa20.07■□□□□ 0.8
Itgb1-201ENSMUST00000090006 Nolc1E9Q5C9 702 aaKnown RBP20.06■□□□□ 0.8
Itgb1-201ENSMUST00000090006 DaxxO35613 739 aa20.04■□□□□ 0.8
Itgb1-201ENSMUST00000090006 Supt16hQ920B9 1047 aa20.03■□□□□ 0.8
Itgb1-201ENSMUST00000090006 Fam50aQ9WV03 339 aaKnown RBP20.01■□□□□ 0.79
Itgb1-201ENSMUST00000090006 Hdac5Q9Z2V6 1113 aa19.99■□□□□ 0.79
Itgb1-201ENSMUST00000090006 NrdcQ8BHG1 1161 aa19.96■□□□□ 0.79
Itgb1-201ENSMUST00000090006 Ccdc27Q3V036 639 aa19.91■□□□□ 0.78
Itgb1-201ENSMUST00000090006 Hsp90aa1P07901 733 aaKnown RBP19.85■□□□□ 0.77
Itgb1-201ENSMUST00000090006 Upf2A2AT37 1269 aaKnown RBP19.84■□□□□ 0.77
Itgb1-201ENSMUST00000090006 Irx3P81067 507 aa19.83■□□□□ 0.77
Itgb1-201ENSMUST00000090006 Clip1Q922J3 1391 aa19.83■□□□□ 0.76
Itgb1-201ENSMUST00000090006 Ccdc9Q8VC31 543 aaKnown RBP19.81■□□□□ 0.76
Itgb1-201ENSMUST00000090006 Ccdc88bQ4QRL3 1481 aa19.8■□□□□ 0.76
Itgb1-201ENSMUST00000090006 P3h3Q8CG70 732 aa19.8■□□□□ 0.76
Itgb1-201ENSMUST00000090006 Gtf3c3Q3TMP1 882 aa19.77■□□□□ 0.76
Itgb1-201ENSMUST00000090006 Znf710Q3U288 666 aa19.72■□□□□ 0.75
Itgb1-201ENSMUST00000090006 Baz1aO88379 1555 aa19.7■□□□□ 0.74
Itgb1-201ENSMUST00000090006 Slc4a3P16283 1227 aa19.7■□□□□ 0.74
Itgb1-201ENSMUST00000090006 Plcd4Q8K3R3 807 aa19.68■□□□□ 0.74
Itgb1-201ENSMUST00000090006 Mrs2Q5NCE8 434 aa19.66■□□□□ 0.74
Itgb1-201ENSMUST00000090006 Pknox2Q8BG99 474 aa19.66■□□□□ 0.74
Itgb1-201ENSMUST00000090006 Il27Q8K3I6 234 aa19.66■□□□□ 0.74
Itgb1-201ENSMUST00000090006 NeflP08551 543 aa19.65■□□□□ 0.74
Itgb1-201ENSMUST00000090006 Brd4Q9ESU6 1400 aaKnown RBP19.63■□□□□ 0.73
Itgb1-201ENSMUST00000090006 Golga3P55937 1487 aa19.59■□□□□ 0.73
Itgb1-201ENSMUST00000090006 Pak3Q61036 559 aa19.55■□□□□ 0.72
Itgb1-201ENSMUST00000090006 Lmod2Q3UHZ5 550 aa19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 72.5 ms