RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Dnah2P0C6F1 4456 aa6.81□□□□□ -1.32
Casc4-201ENSMUST00000078752 Dnah1E9Q8T7 4250 aa6.81□□□□□ -1.32
Casc4-201ENSMUST00000078752 Stard9Q80TF6 4561 aa6.8□□□□□ -1.32
Casc4-201ENSMUST00000078752 Vps13dB1ART2 4390 aa6.8□□□□□ -1.32
Casc4-201ENSMUST00000078752 PrkdcP97313 4128 aa6.78□□□□□ -1.32
Casc4-201ENSMUST00000078752 Dnah7cA0A087WR13 4024 aa6.77□□□□□ -1.33
Casc4-201ENSMUST00000078752 Lrp1Q91ZX7 4545 aaKnown RBP6.75□□□□□ -1.33
Casc4-201ENSMUST00000078752 HydinQ80W93 5154 aa6.74□□□□□ -1.33
Casc4-201ENSMUST00000078752 Mycbp2Q7TPH6 4711 aa6.72□□□□□ -1.33
Casc4-201ENSMUST00000078752 Ryr3A2AGL3 4863 aa6.7□□□□□ -1.34
Casc4-201ENSMUST00000078752 Fat3Q8BNA6 4555 aa6.64□□□□□ -1.35
Casc4-201ENSMUST00000078752 TnxbO35452 4006 aa6.64□□□□□ -1.35
Casc4-201ENSMUST00000078752 Dync1h1Q9JHU4 4644 aaKnown RBP6.61□□□□□ -1.35
Casc4-201ENSMUST00000078752 Dnah7aE9Q0T8 4024 aa6.59□□□□□ -1.35
Casc4-201ENSMUST00000078752 SacsQ9JLC8 4582 aa6.57□□□□□ -1.36
Casc4-201ENSMUST00000078752 Dync2h1Q45VK7 4306 aa6.56□□□□□ -1.36
Casc4-201ENSMUST00000078752 Sprr2a3Q4KL71 83 aa6.55□□□□□ -1.36
Casc4-201ENSMUST00000078752 Sprr2a1Q9CQK8 83 aa6.55□□□□□ -1.36
Casc4-201ENSMUST00000078752 Fras1Q80T14 4010 aa6.52□□□□□ -1.37
Casc4-201ENSMUST00000078752 Kiaa1109A2AAE1 5005 aa6.45□□□□□ -1.38
Casc4-201ENSMUST00000078752 Lrp2A2ARV4 4660 aa6.41□□□□□ -1.38
Casc4-201ENSMUST00000078752 4933428G20RikQ9D3X4 101 aa6.36□□□□□ -1.39
Casc4-201ENSMUST00000078752 Pkd1O08852 4293 aa6.35□□□□□ -1.39
Casc4-201ENSMUST00000078752 Herc2Q4U2R1 4836 aa6.33□□□□□ -1.4
Casc4-201ENSMUST00000078752 Fat2Q5F226 4351 aa6.32□□□□□ -1.4
Casc4-201ENSMUST00000078752 Krtap1-5A2A590 122 aa6.3□□□□□ -1.4
Casc4-201ENSMUST00000078752 Fat1A0A1L1SQU7 4645 aa6.3□□□□□ -1.4
Casc4-201ENSMUST00000078752 LorP18165 486 aa6.27□□□□□ -1.41
Casc4-201ENSMUST00000078752 Dnah8Q91XQ0 4731 aa6.2□□□□□ -1.42
Casc4-201ENSMUST00000078752 Gm18596A0A1W2P860 280 aa6.11□□□□□ -1.43
Casc4-201ENSMUST00000078752 Pkhd1E9PZ36 4059 aa6.11□□□□□ -1.43
Casc4-201ENSMUST00000078752 Krtap1-4Q3V2D6 188 aa6.06□□□□□ -1.44
Casc4-201ENSMUST00000078752 Kmt2cQ8BRH4 4903 aa6.02□□□□□ -1.45
Casc4-201ENSMUST00000078752 Abca13Q5SSE9 5034 aa6.02□□□□□ -1.45
Casc4-201ENSMUST00000078752 Pkhd1l1Q80ZA4 4249 aa6.01□□□□□ -1.45
Casc4-201ENSMUST00000078752 Krtap19-9aF8WH65 55 aa5.95□□□□□ -1.46
Casc4-201ENSMUST00000078752 Krtap12-1Q9Z287 130 aa5.94□□□□□ -1.46
Casc4-201ENSMUST00000078752 PcloQ9QYX7 5068 aa5.93□□□□□ -1.46
Casc4-201ENSMUST00000078752 Gm6358A0A087WPH4 74 aa5.91□□□□□ -1.46
Casc4-201ENSMUST00000078752 Krtap16-3Q8C1I6 86 aa5.9□□□□□ -1.46
Casc4-201ENSMUST00000078752 Ryr2E9Q401 4966 aaKnown RBP5.88□□□□□ -1.47
Casc4-201ENSMUST00000078752 Krtap19-9bQ99NG9 58 aa5.85□□□□□ -1.47
Casc4-201ENSMUST00000078752 Krtap19-3Q925H6 87 aa5.84□□□□□ -1.48
Casc4-201ENSMUST00000078752 Dnhd1D3Z2X2 4750 aa5.83□□□□□ -1.48
Casc4-201ENSMUST00000078752 Mdn1A2ANY6 5589 aaKnown RBP5.82□□□□□ -1.48
Casc4-201ENSMUST00000078752 Syne1Q6ZWR6 8799 aa5.8□□□□□ -1.48
Casc4-201ENSMUST00000078752 2310046K23RikA0A0A6YVW6 87 aa5.76□□□□□ -1.49
Casc4-201ENSMUST00000078752 Krtap19-1Q925H2 87 aa5.73□□□□□ -1.49
Casc4-201ENSMUST00000078752 Birc6O88738 4882 aa5.73□□□□□ -1.49
Casc4-201ENSMUST00000078752 Lce1mQ9CR91 182 aa5.72□□□□□ -1.49
Casc4-201ENSMUST00000078752 Ubr4A2AN08 5180 aa5.72□□□□□ -1.49
Casc4-201ENSMUST00000078752 Herc1E9PZP8 4859 aa5.64□□□□□ -1.51
Casc4-201ENSMUST00000078752 Krtap8-1O08633 61 aa5.63□□□□□ -1.51
Casc4-201ENSMUST00000078752 Krtap9-5A2A5X3 358 aa5.61□□□□□ -1.51
Casc4-201ENSMUST00000078752 Lce1jD3YUU5 139 aa5.58□□□□□ -1.52
Casc4-201ENSMUST00000078752 Gm10100J3QK64 120 aa5.5□□□□□ -1.53
Casc4-201ENSMUST00000078752 Krtap1-3A2A588 173 aa5.47□□□□□ -1.53
Casc4-201ENSMUST00000078752 Fat4Q2PZL6 4981 aa5.46□□□□□ -1.54
Casc4-201ENSMUST00000078752 4932415D10RikA0A1W2P6U8 4986 aa5.42□□□□□ -1.54
Casc4-201ENSMUST00000078752 Rnf213E9Q555 5152 aaKnown RBP5.42□□□□□ -1.54
Casc4-201ENSMUST00000078752 ZanO88799 5376 aa5.38□□□□□ -1.55
Casc4-201ENSMUST00000078752 Hmcn2A2AJ76 5100 aa5.37□□□□□ -1.55
Casc4-201ENSMUST00000078752 Muc16A0A140LJ72 8478 aa5.35□□□□□ -1.55
Casc4-201ENSMUST00000078752 Sprr2kO70562 68 aa5.34□□□□□ -1.55
Casc4-201ENSMUST00000078752 Gm10272F7CZ33 110 aa5.33□□□□□ -1.56
Casc4-201ENSMUST00000078752 Krtap19-2Q925I0 141 aa5.33□□□□□ -1.56
Casc4-201ENSMUST00000078752 Ush2AQ2QI47 5193 aa5.32□□□□□ -1.56
Casc4-201ENSMUST00000078752 Gm10142J3KMP7 120 aa5.32□□□□□ -1.56
Casc4-201ENSMUST00000078752 Mt2P02798 61 aa5.3□□□□□ -1.56
Casc4-201ENSMUST00000078752 Prm1P02319 51 aa5.27□□□□□ -1.57
Casc4-201ENSMUST00000078752 Lce3bQ9CQM7 98 aa5.27□□□□□ -1.57
Casc4-201ENSMUST00000078752 Krtap31-1Q9D644 177 aa5.27□□□□□ -1.57
Casc4-201ENSMUST00000078752 Gm7735D3YX18 52 aa5.26□□□□□ -1.57
Casc4-201ENSMUST00000078752 Krtap9-3Q3V2C1 136 aa5.25□□□□□ -1.57
Casc4-201ENSMUST00000078752 Lce3cQ91V05 98 aa5.19□□□□□ -1.58
Casc4-201ENSMUST00000078752 Krtap17-1A2A5X6 109 aa5.18□□□□□ -1.58
Casc4-201ENSMUST00000078752 Gm9789Q8BIG3 52 aa5.16□□□□□ -1.58
Casc4-201ENSMUST00000078752 Sprr2gO70558 76 aa5.15□□□□□ -1.58
Casc4-201ENSMUST00000078752 Lce1hQ9D6R3 140 aa5.15□□□□□ -1.58
Casc4-201ENSMUST00000078752 Lce1iQ9D6P5 149 aa5.13□□□□□ -1.59
Casc4-201ENSMUST00000078752 Lce1dQ9D731 133 aa5.12□□□□□ -1.59
Casc4-201ENSMUST00000078752 Krtap22-2J3QNX6 67 aa5.12□□□□□ -1.59
Casc4-201ENSMUST00000078752 Lce3dE9Q8V1 98 aa5.11□□□□□ -1.59
Casc4-201ENSMUST00000078752 Lce1a2Q9D1K4 149 aa5.11□□□□□ -1.59
Casc4-201ENSMUST00000078752 Gm10061D3Z714 54 aa5.04□□□□□ -1.6
Casc4-201ENSMUST00000078752 Gm38119A0A0A6YX29 146 aa5.03□□□□□ -1.6
Casc4-201ENSMUST00000078752 Fsip2A2ARZ3 6995 aa5□□□□□ -1.61
Casc4-201ENSMUST00000078752 Gm11938Q9D3H4 131 aa4.99□□□□□ -1.61
Casc4-201ENSMUST00000078752 Lce3aQ497I5 98 aa4.95□□□□□ -1.62
Casc4-201ENSMUST00000078752 Lce3eF8VQJ0 98 aa4.94□□□□□ -1.62
Casc4-201ENSMUST00000078752 Lce3fQ6PAI4 98 aa4.94□□□□□ -1.62
Casc4-201ENSMUST00000078752 Gm11569B1AQB1 180 aa4.9□□□□□ -1.63
Casc4-201ENSMUST00000078752 Lce1eQ9D139 143 aa4.85□□□□□ -1.63
Casc4-201ENSMUST00000078752 Krtap4-16Q91W93 202 aa4.77□□□□□ -1.65
Casc4-201ENSMUST00000078752 Sprr2dO70555 85 aa4.75□□□□□ -1.65
Casc4-201ENSMUST00000078752 Lce1gQ9D195 139 aa4.73□□□□□ -1.65
Casc4-201ENSMUST00000078752 Lce1cQ9D1C5 147 aa4.72□□□□□ -1.65
Casc4-201ENSMUST00000078752 Macf1Q9QXZ0 7354 aaKnown RBP4.71□□□□□ -1.65
Casc4-201ENSMUST00000078752 Sprr2iO70560 76 aa4.71□□□□□ -1.66
Casc4-201ENSMUST00000078752 Krtap4-6Q3V4B7 195 aa4.71□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 97.5 ms