RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Rhox8Q6VSS7 320 aa25.75■■□□□ 1.71
Casc4-201ENSMUST00000078752 Rpgrip1Q9EPQ2 1331 aa25.46■■□□□ 1.67
Casc4-201ENSMUST00000078752 Ehmt2Q9Z148 1263 aaKnown RBP25.06■■□□□ 1.6
Casc4-201ENSMUST00000078752 Las1lA2BE28 776 aaKnown RBP24.5■■□□□ 1.51
Casc4-201ENSMUST00000078752 Pcgf6Q99NA9 353 aa24.18■■□□□ 1.46
Casc4-201ENSMUST00000078752 Acin1Q9JIX8 1338 aaKnown RBP24.1■■□□□ 1.45
Casc4-201ENSMUST00000078752 Zeb1Q64318 1117 aa23.87■■□□□ 1.41
Casc4-201ENSMUST00000078752 Cngb1E1AZ71 1325 aa23.65■■□□□ 1.38
Casc4-201ENSMUST00000078752 CenpbP27790 599 aa23.65■■□□□ 1.38
Casc4-201ENSMUST00000078752 Supt5hO55201 1082 aaKnown RBP23.5■■□□□ 1.35
Casc4-201ENSMUST00000078752 Wdr66E9Q743 1299 aa23.46■■□□□ 1.35
Casc4-201ENSMUST00000078752 DiexfQ8BTT6 772 aaKnown RBP23.43■■□□□ 1.34
Casc4-201ENSMUST00000078752 Ccdc136Q3TVA9 1136 aa23.3■■□□□ 1.32
Casc4-201ENSMUST00000078752 Neurod1Q60867 357 aa23.3■■□□□ 1.32
Casc4-201ENSMUST00000078752 Myt1Q8CFC2 1127 aa23.28■■□□□ 1.32
Casc4-201ENSMUST00000078752 NischQ80TM9 1593 aa23.1■■□□□ 1.29
Casc4-201ENSMUST00000078752 Amer1Q7TS75 1132 aa23■■□□□ 1.27
Casc4-201ENSMUST00000078752 Csrnp3P59055 597 aa22.87■■□□□ 1.25
Casc4-201ENSMUST00000078752 Gm38655A0A286YDK6 273 aa22.85■■□□□ 1.25
Casc4-201ENSMUST00000078752 Ttbk1Q6PCN3 1308 aa22.78■■□□□ 1.24
Casc4-201ENSMUST00000078752 Pelp1Q9DBD5 1123 aaKnown RBP22.77■■□□□ 1.24
Casc4-201ENSMUST00000078752 Cdk11bP24788 784 aaKnown RBP22.76■■□□□ 1.23
Casc4-201ENSMUST00000078752 1700123L14RikQ3V2K7 440 aa22.74■■□□□ 1.23
Casc4-201ENSMUST00000078752 Ppargc1bQ8VHJ7 1014 aa22.74■■□□□ 1.23
Casc4-201ENSMUST00000078752 Gab3Q8BSM5 595 aa22.65■■□□□ 1.22
Casc4-201ENSMUST00000078752 Nop58Q6DFW4 536 aaKnown RBP22.59■■□□□ 1.21
Casc4-201ENSMUST00000078752 NefmP08553 848 aa22.57■■□□□ 1.2
Casc4-201ENSMUST00000078752 Ccdc180J3QNE4 1664 aa22.57■■□□□ 1.2
Casc4-201ENSMUST00000078752 Trim41Q5NCC3 630 aa22.54■■□□□ 1.2
Casc4-201ENSMUST00000078752 Esf1Q3V1V3 845 aaKnown RBP22.43■■□□□ 1.18
Casc4-201ENSMUST00000078752 Anks4bQ8K3X6 423 aa22.41■■□□□ 1.18
Casc4-201ENSMUST00000078752 Bcl11aQ9QYE3 773 aa22.4■■□□□ 1.18
Casc4-201ENSMUST00000078752 Sall2Q9QX96 1004 aa22.35■■□□□ 1.17
Casc4-201ENSMUST00000078752 Aplp2Q06335 707 aa22.29■■□□□ 1.16
Casc4-201ENSMUST00000078752 HrcG5E8J6 738 aa22.22■■□□□ 1.15
Casc4-201ENSMUST00000078752 Rtl1Q7M732 1744 aa22.19■■□□□ 1.14
Casc4-201ENSMUST00000078752 UbtfP25976 765 aaKnown RBP22.13■■□□□ 1.13
Casc4-201ENSMUST00000078752 Slc24a1Q91WD8 1130 aa22.05■■□□□ 1.12
Casc4-201ENSMUST00000078752 Myt1lP97500 1187 aa22.03■■□□□ 1.12
Casc4-201ENSMUST00000078752 Mapk8ip2Q9ERE9 830 aa22.02■■□□□ 1.12
Casc4-201ENSMUST00000078752 Mier1Q5UAK0 511 aa21.96■■□□□ 1.11
Casc4-201ENSMUST00000078752 Fam71e1A1L3C1 212 aa21.95■■□□□ 1.1
Casc4-201ENSMUST00000078752 Tnnt3Q9QZ47 272 aa21.92■■□□□ 1.1
Casc4-201ENSMUST00000078752 4933416C03RikQ3V063 378 aa21.9■■□□□ 1.1
Casc4-201ENSMUST00000078752 Npm2Q80W85 207 aa21.85■■□□□ 1.09
Casc4-201ENSMUST00000078752 PrkcshO08795 521 aa21.8■■□□□ 1.08
Casc4-201ENSMUST00000078752 Abcc9P70170 1546 aa21.77■■□□□ 1.07
Casc4-201ENSMUST00000078752 Anp32aO35381 247 aa21.73■■□□□ 1.07
Casc4-201ENSMUST00000078752 Rtl5Q5DTT4 599 aa21.72■■□□□ 1.07
Casc4-201ENSMUST00000078752 Dcaf1Q80TR8 1506 aa21.71■■□□□ 1.07
Casc4-201ENSMUST00000078752 ClspnQ80YR7 1315 aa21.71■■□□□ 1.07
Casc4-201ENSMUST00000078752 Stra8P70278 393 aa21.7■■□□□ 1.06
Casc4-201ENSMUST00000078752 Ube2uB1AUC4 352 aa21.69■■□□□ 1.06
Casc4-201ENSMUST00000078752 Eif5bQ05D44 1216 aaKnown RBP21.6■■□□□ 1.05
Casc4-201ENSMUST00000078752 Ap3b1Q9Z1T1 1105 aa21.58■■□□□ 1.05
Casc4-201ENSMUST00000078752 SafbD3YXK2 937 aaKnown RBP21.55■■□□□ 1.04
Casc4-201ENSMUST00000078752 TonslQ6NZL6 1363 aa21.51■■□□□ 1.03
Casc4-201ENSMUST00000078752 Aebp2Q9Z248 504 aaKnown RBP21.5■■□□□ 1.03
Casc4-201ENSMUST00000078752 Ifnlr1Q8CGK5 535 aa21.43■■□□□ 1.02
Casc4-201ENSMUST00000078752 DaxxO35613 739 aa21.4■■□□□ 1.02
Casc4-201ENSMUST00000078752 Gm35339A0A140LHH9 1649 aa21.39■■□□□ 1.02
Casc4-201ENSMUST00000078752 Il27Q8K3I6 234 aa21.38■■□□□ 1.01
Casc4-201ENSMUST00000078752 Zcchc6Q5BLK4 1491 aaKnown RBP21.37■■□□□ 1.01
Casc4-201ENSMUST00000078752 Hnrnpul2Q00PI9 745 aaKnown RBP21.3■■□□□ 1
Casc4-201ENSMUST00000078752 Ppp4r2Q0VGB7 417 aa21.2■□□□□ 0.98
Casc4-201ENSMUST00000078752 NclP09405 707 aaKnown RBP21.2■□□□□ 0.98
Casc4-201ENSMUST00000078752 Abcc8B2RUS7 1588 aa21.2■□□□□ 0.98
Casc4-201ENSMUST00000078752 Calr4Q3TQS0 420 aa21.18■□□□□ 0.98
Casc4-201ENSMUST00000078752 Eid3Q3V124 375 aa21.04■□□□□ 0.96
Casc4-201ENSMUST00000078752 NrdcQ8BHG1 1161 aa21■□□□□ 0.95
Casc4-201ENSMUST00000078752 Hdac5Q9Z2V6 1113 aa20.96■□□□□ 0.95
Casc4-201ENSMUST00000078752 4930567H17RikQ3V0K5 233 aa20.96■□□□□ 0.95
Casc4-201ENSMUST00000078752 Wdr43Q6ZQL4 677 aaKnown RBP20.95■□□□□ 0.94
Casc4-201ENSMUST00000078752 Chic1Q8CBW7 227 aa20.93■□□□□ 0.94
Casc4-201ENSMUST00000078752 Hsp90aa1P07901 733 aaKnown RBP20.92■□□□□ 0.94
Casc4-201ENSMUST00000078752 Pknox2Q8BG99 474 aa20.9■□□□□ 0.94
Casc4-201ENSMUST00000078752 Irx3P81067 507 aa20.9■□□□□ 0.94
Casc4-201ENSMUST00000078752 Cep164Q5DU05 1446 aa20.89■□□□□ 0.94
Casc4-201ENSMUST00000078752 Fam50aQ9WV03 339 aaKnown RBP20.89■□□□□ 0.93
Casc4-201ENSMUST00000078752 Ccdc27Q3V036 639 aa20.83■□□□□ 0.93
Casc4-201ENSMUST00000078752 NeflP08551 543 aa20.79■□□□□ 0.92
Casc4-201ENSMUST00000078752 Ccdc9Q8VC31 543 aaKnown RBP20.78■□□□□ 0.92
Casc4-201ENSMUST00000078752 Gtf3c3Q3TMP1 882 aa20.76■□□□□ 0.91
Casc4-201ENSMUST00000078752 Plekhg3Q4VAC9 1341 aa20.75■□□□□ 0.91
Casc4-201ENSMUST00000078752 Supt16hQ920B9 1047 aa20.73■□□□□ 0.91
Casc4-201ENSMUST00000078752 Upf2A2AT37 1269 aaKnown RBP20.72■□□□□ 0.91
Casc4-201ENSMUST00000078752 Taok2Q6ZQ29 1240 aa20.71■□□□□ 0.91
Casc4-201ENSMUST00000078752 Nolc1E9Q5C9 702 aaKnown RBP20.7■□□□□ 0.9
Casc4-201ENSMUST00000078752 Plcd4Q8K3R3 807 aa20.7■□□□□ 0.9
Casc4-201ENSMUST00000078752 ArxO35085 564 aa20.67■□□□□ 0.9
Casc4-201ENSMUST00000078752 P3h3Q8CG70 732 aa20.66■□□□□ 0.9
Casc4-201ENSMUST00000078752 Zbtb7cQ8VCZ7 619 aa20.66■□□□□ 0.9
Casc4-201ENSMUST00000078752 Lmod2Q3UHZ5 550 aa20.59■□□□□ 0.89
Casc4-201ENSMUST00000078752 Slc4a3P16283 1227 aa20.56■□□□□ 0.88
Casc4-201ENSMUST00000078752 Zbtb4Q5F293 982 aa20.51■□□□□ 0.87
Casc4-201ENSMUST00000078752 Anp32bQ9EST5 272 aaKnown RBP20.47■□□□□ 0.87
Casc4-201ENSMUST00000078752 Rtn4Q99P72 1162 aaKnown RBP20.44■□□□□ 0.86
Casc4-201ENSMUST00000078752 Ythdc1E9Q5K9 736 aaKnown RBP20.43■□□□□ 0.86
Casc4-201ENSMUST00000078752 Mrs2Q5NCE8 434 aa20.4■□□□□ 0.86
Casc4-201ENSMUST00000078752 CanxP35564 591 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 61.4 ms