RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Mycbp2Q7TPH6 4711 aa1.92□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Dnah17Q69Z23 4481 aa1.91□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Krtap1-4Q3V2D6 188 aa1.91□□□□□ -2.1
Prkdc-201ENSMUST00000023352 Dnah7aE9Q0T8 4024 aa1.91□□□□□ -2.1
Prkdc-201ENSMUST00000023352 PrkdcP97313 4128 aa1.9□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Dnah6E9Q0B6 4144 aa1.9□□□□□ -2.11
Prkdc-201ENSMUST00000023352 SacsQ9JLC8 4582 aa1.88□□□□□ -2.11
Prkdc-201ENSMUST00000023352 PlecQ9QXS1 4691 aaKnown RBP1.88□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Dnah2P0C6F1 4456 aa1.87□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Stard9Q80TF6 4561 aa1.87□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Krtap31-2Q8CAY5 177 aa1.87□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Gm18596A0A1W2P860 280 aa1.86□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Sprr2kO70562 68 aa1.85□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Dnah9B1AR51 4484 aa1.85□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Lrp1bQ9JI18 4599 aa1.85□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Dnah1E9Q8T7 4250 aa1.85□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Sprr2gO70558 76 aa1.85□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Fras1Q80T14 4010 aa1.84□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Gm6358A0A087WPH4 74 aa1.84□□□□□ -2.11
Prkdc-201ENSMUST00000023352 Lrp1Q91ZX7 4545 aaKnown RBP1.83□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Gm19402J3QJV4 266 aa1.82□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Krtap12-1Q9Z287 130 aa1.82□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Dnah11E9Q7N9 4488 aa1.82□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Vps13dB1ART2 4390 aa1.81□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Dync2h1Q45VK7 4306 aa1.81□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Fat1A0A1L1SQU7 4645 aa1.8□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Dnah8Q91XQ0 4731 aa1.8□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Ryr3A2AGL3 4863 aa1.78□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Vps13bQ80TY5 3993 aa1.78□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Hectd4E9Q2E4 4418 aa1.78□□□□□ -2.12
Prkdc-201ENSMUST00000023352 Ryr2E9Q401 4966 aaKnown RBP1.77□□□□□ -2.13
Prkdc-201ENSMUST00000023352 ApobE9Q414 4505 aa1.76□□□□□ -2.13
Prkdc-201ENSMUST00000023352 Pkd1O08852 4293 aa1.75□□□□□ -2.13
Prkdc-201ENSMUST00000023352 Dync1h1Q9JHU4 4644 aaKnown RBP1.75□□□□□ -2.13
Prkdc-201ENSMUST00000023352 Krtap16-3Q8C1I6 86 aa1.75□□□□□ -2.13
Prkdc-201ENSMUST00000023352 Krtap31-1Q9D644 177 aa1.75□□□□□ -2.13
Prkdc-201ENSMUST00000023352 Krtap19-3Q925H6 87 aa1.73□□□□□ -2.13
Prkdc-201ENSMUST00000023352 Herc2Q4U2R1 4836 aa1.73□□□□□ -2.13
Prkdc-201ENSMUST00000023352 Prm1P02319 51 aa1.72□□□□□ -2.13
Prkdc-201ENSMUST00000023352 LorP18165 486 aa1.71□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Krtap19-1Q925H2 87 aa1.71□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Dnhd1D3Z2X2 4750 aa1.71□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Fat3Q8BNA6 4555 aa1.71□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Kiaa1109A2AAE1 5005 aa1.7□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Pkhd1E9PZ36 4059 aa1.7□□□□□ -2.14
Prkdc-201ENSMUST00000023352 HydinQ80W93 5154 aa1.7□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Lce3bQ9CQM7 98 aa1.69□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Gm10100J3QK64 120 aa1.68□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Birc6O88738 4882 aa1.68□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Lce3cQ91V05 98 aa1.66□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Lce1mQ9CR91 182 aa1.66□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Gm10272F7CZ33 110 aa1.66□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Lce3dE9Q8V1 98 aa1.66□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Gm10142J3KMP7 120 aa1.65□□□□□ -2.14
Prkdc-201ENSMUST00000023352 Kmt2cQ8BRH4 4903 aa1.65□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Fat2Q5F226 4351 aa1.65□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Abca13Q5SSE9 5034 aa1.65□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Lce3eF8VQJ0 98 aa1.64□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Lce3fQ6PAI4 98 aa1.64□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Gm9789Q8BIG3 52 aa1.63□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Sprr2fO70557 76 aa1.6□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Mt3P28184 68 aa1.6□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Pkhd1l1Q80ZA4 4249 aa1.6□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Sprr2iO70560 76 aa1.6□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Lce3aQ497I5 98 aa1.6□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Krtap19-2Q925I0 141 aa1.59□□□□□ -2.15
Prkdc-201ENSMUST00000023352 Gm7735D3YX18 52 aa1.59□□□□□ -2.16
Prkdc-201ENSMUST00000023352 PcloQ9QYX7 5068 aa1.58□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Gm10024A0A0A0MQA4 119 aa1.58□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Krtap22-2J3QNX6 67 aa1.58□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Krtap19-4Q925H7 84 aa1.58□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Mt2P02798 61 aa1.57□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Krtap1-3A2A588 173 aa1.56□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Lrp2A2ARV4 4660 aa1.56□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Sprr2dO70555 85 aa1.55□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Ubr4A2AN08 5180 aa1.55□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Krtap9-3Q3V2C1 136 aa1.55□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Sprr2eO70556 76 aa1.55□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Herc1E9PZP8 4859 aa1.54□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Sprr2hO70559 108 aa1.54□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Syne2Q6ZWQ0 6874 aaKnown RBP1.53□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Krtap9-5A2A5X3 358 aa1.53□□□□□ -2.16
Prkdc-201ENSMUST00000023352 Eppk1Q8R0W0 6548 aa1.53□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Lce1jD3YUU5 139 aa1.52□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Hmcn2A2AJ76 5100 aa1.51□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Gm10061D3Z714 54 aa1.49□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Rnf213E9Q555 5152 aaKnown RBP1.49□□□□□ -2.17
Prkdc-201ENSMUST00000023352 4932415D10RikA0A1W2P6U8 4986 aa1.49□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Gm11938Q9D3H4 131 aa1.48□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Krtap4-2B1AQ85 167 aa1.47□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Fat4Q2PZL6 4981 aa1.47□□□□□ -2.17
Prkdc-201ENSMUST00000023352 ZanO88799 5376 aa1.47□□□□□ -2.17
Prkdc-201ENSMUST00000023352 Lce1fB9EJP6 147 aa1.46□□□□□ -2.18
Prkdc-201ENSMUST00000023352 Lce1cQ9D1C5 147 aa1.46□□□□□ -2.18
Prkdc-201ENSMUST00000023352 Lce1lQ9D1G7 135 aa1.46□□□□□ -2.18
Prkdc-201ENSMUST00000023352 Lce1dQ9D731 133 aa1.46□□□□□ -2.18
Prkdc-201ENSMUST00000023352 Gm11562A0PK51 136 aa1.46□□□□□ -2.18
Prkdc-201ENSMUST00000023352 Gm38119A0A0A6YX29 146 aa1.45□□□□□ -2.18
Prkdc-201ENSMUST00000023352 Lce1bQ9D149 137 aa1.45□□□□□ -2.18
Prkdc-201ENSMUST00000023352 Lce1eQ9D139 143 aa1.44□□□□□ -2.18
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms