RNA–Protein interactions for RNA: ENSMUST00000021046.5

Ddx42-201, Transcript of ATP-dependent RNA helicase DDX42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx42, Length 4,011 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42-201ENSMUST00000021046 Sprr2a1Q9CQK8 83 aa6.05□□□□□ -1.44
Ddx42-201ENSMUST00000021046 Dnah6E9Q0B6 4144 aa6.03□□□□□ -1.44
Ddx42-201ENSMUST00000021046 Lrp1Q91ZX7 4545 aaKnown RBP6.01□□□□□ -1.45
Ddx42-201ENSMUST00000021046 Krtap19-5O08632 62 aa5.99□□□□□ -1.45
Ddx42-201ENSMUST00000021046 Dnah7cA0A087WR13 4024 aa5.97□□□□□ -1.45
Ddx42-201ENSMUST00000021046 Vps13dB1ART2 4390 aa5.93□□□□□ -1.46
Ddx42-201ENSMUST00000021046 Crct1Q6PAI5 102 aa5.93□□□□□ -1.46
Ddx42-201ENSMUST00000021046 SacsQ9JLC8 4582 aa5.88□□□□□ -1.47
Ddx42-201ENSMUST00000021046 PrkdcP97313 4128 aa5.84□□□□□ -1.48
Ddx42-201ENSMUST00000021046 Fras1Q80T14 4010 aa5.81□□□□□ -1.48
Ddx42-201ENSMUST00000021046 Dync1h1Q9JHU4 4644 aaKnown RBP5.8□□□□□ -1.48
Ddx42-201ENSMUST00000021046 Krtap1-5A2A590 122 aa5.78□□□□□ -1.48
Ddx42-201ENSMUST00000021046 Dnah7aE9Q0T8 4024 aa5.77□□□□□ -1.49
Ddx42-201ENSMUST00000021046 Fat3Q8BNA6 4555 aa5.76□□□□□ -1.49
Ddx42-201ENSMUST00000021046 Dync2h1Q45VK7 4306 aa5.71□□□□□ -1.5
Ddx42-201ENSMUST00000021046 4933428G20RikQ9D3X4 101 aa5.71□□□□□ -1.5
Ddx42-201ENSMUST00000021046 Fat2Q5F226 4351 aa5.6□□□□□ -1.51
Ddx42-201ENSMUST00000021046 Pkd1O08852 4293 aa5.59□□□□□ -1.51
Ddx42-201ENSMUST00000021046 Fat1A0A1L1SQU7 4645 aa5.56□□□□□ -1.52
Ddx42-201ENSMUST00000021046 Mycbp2Q7TPH6 4711 aa5.53□□□□□ -1.52
Ddx42-201ENSMUST00000021046 Krtap1-4Q3V2D6 188 aa5.51□□□□□ -1.53
Ddx42-201ENSMUST00000021046 TnxbO35452 4006 aa5.5□□□□□ -1.53
Ddx42-201ENSMUST00000021046 Ryr3A2AGL3 4863 aa5.48□□□□□ -1.53
Ddx42-201ENSMUST00000021046 Ryr1E9PZQ0 5035 aa5.47□□□□□ -1.53
Ddx42-201ENSMUST00000021046 2310046K23RikA0A0A6YVW6 87 aa5.39□□□□□ -1.55
Ddx42-201ENSMUST00000021046 Krtap12-1Q9Z287 130 aa5.38□□□□□ -1.55
Ddx42-201ENSMUST00000021046 Lrp2A2ARV4 4660 aa5.38□□□□□ -1.55
Ddx42-201ENSMUST00000021046 Dnah8Q91XQ0 4731 aa5.36□□□□□ -1.55
Ddx42-201ENSMUST00000021046 HydinQ80W93 5154 aa5.36□□□□□ -1.55
Ddx42-201ENSMUST00000021046 Krtap19-9bQ99NG9 58 aa5.32□□□□□ -1.56
Ddx42-201ENSMUST00000021046 Krtap19-9aF8WH65 55 aa5.31□□□□□ -1.56
Ddx42-201ENSMUST00000021046 Pkhd1l1Q80ZA4 4249 aa5.28□□□□□ -1.56
Ddx42-201ENSMUST00000021046 Krtap16-3Q8C1I6 86 aa5.24□□□□□ -1.57
Ddx42-201ENSMUST00000021046 Pkhd1E9PZ36 4059 aa5.22□□□□□ -1.57
Ddx42-201ENSMUST00000021046 Kmt2cQ8BRH4 4903 aa5.21□□□□□ -1.58
Ddx42-201ENSMUST00000021046 Krtap8-1O08633 61 aa5.17□□□□□ -1.58
Ddx42-201ENSMUST00000021046 Krtap31-1Q9D644 177 aa5.13□□□□□ -1.59
Ddx42-201ENSMUST00000021046 Krtap19-3Q925H6 87 aa5.09□□□□□ -1.6
Ddx42-201ENSMUST00000021046 Kiaa1109A2AAE1 5005 aa5.08□□□□□ -1.6
Ddx42-201ENSMUST00000021046 Krtap19-1Q925H2 87 aa5.06□□□□□ -1.6
Ddx42-201ENSMUST00000021046 Abca13Q5SSE9 5034 aa5.05□□□□□ -1.6
Ddx42-201ENSMUST00000021046 Syne1Q6ZWR6 8799 aa5.03□□□□□ -1.6
Ddx42-201ENSMUST00000021046 Lce1jD3YUU5 139 aa5.03□□□□□ -1.6
Ddx42-201ENSMUST00000021046 Gm6358A0A087WPH4 74 aa5.03□□□□□ -1.6
Ddx42-201ENSMUST00000021046 Herc2Q4U2R1 4836 aa5.01□□□□□ -1.61
Ddx42-201ENSMUST00000021046 LorP18165 486 aa4.98□□□□□ -1.61
Ddx42-201ENSMUST00000021046 Gm10100J3QK64 120 aa4.94□□□□□ -1.62
Ddx42-201ENSMUST00000021046 Krtap9-3Q3V2C1 136 aa4.89□□□□□ -1.63
Ddx42-201ENSMUST00000021046 PcloQ9QYX7 5068 aa4.88□□□□□ -1.63
Ddx42-201ENSMUST00000021046 Ryr2E9Q401 4966 aaKnown RBP4.87□□□□□ -1.63
Ddx42-201ENSMUST00000021046 Lce1dQ9D731 133 aa4.83□□□□□ -1.64
Ddx42-201ENSMUST00000021046 Dnhd1D3Z2X2 4750 aa4.81□□□□□ -1.64
Ddx42-201ENSMUST00000021046 Sprr2gO70558 76 aa4.81□□□□□ -1.64
Ddx42-201ENSMUST00000021046 Gm10142J3KMP7 120 aa4.8□□□□□ -1.64
Ddx42-201ENSMUST00000021046 Lce1hQ9D6R3 140 aa4.8□□□□□ -1.64
Ddx42-201ENSMUST00000021046 Gm10272F7CZ33 110 aa4.79□□□□□ -1.64
Ddx42-201ENSMUST00000021046 Krtap31-2Q8CAY5 177 aa4.75□□□□□ -1.65
Ddx42-201ENSMUST00000021046 Lce3bQ9CQM7 98 aa4.73□□□□□ -1.65
Ddx42-201ENSMUST00000021046 Krtap9-5A2A5X3 358 aa4.71□□□□□ -1.66
Ddx42-201ENSMUST00000021046 Herc1E9PZP8 4859 aa4.71□□□□□ -1.66
Ddx42-201ENSMUST00000021046 Gm11938Q9D3H4 131 aa4.69□□□□□ -1.66
Ddx42-201ENSMUST00000021046 Ubr4A2AN08 5180 aa4.68□□□□□ -1.66
Ddx42-201ENSMUST00000021046 Lce3cQ91V05 98 aa4.66□□□□□ -1.66
Ddx42-201ENSMUST00000021046 Fat4Q2PZL6 4981 aa4.63□□□□□ -1.67
Ddx42-201ENSMUST00000021046 Hmcn2A2AJ76 5100 aa4.63□□□□□ -1.67
Ddx42-201ENSMUST00000021046 Lce1iQ9D6P5 149 aa4.63□□□□□ -1.67
Ddx42-201ENSMUST00000021046 Lce1a2Q9D1K4 149 aa4.62□□□□□ -1.67
Ddx42-201ENSMUST00000021046 Lce3dE9Q8V1 98 aa4.61□□□□□ -1.67
Ddx42-201ENSMUST00000021046 Krtap17-1A2A5X6 109 aa4.59□□□□□ -1.67
Ddx42-201ENSMUST00000021046 Ush2AQ2QI47 5193 aa4.59□□□□□ -1.68
Ddx42-201ENSMUST00000021046 Lce1eQ9D139 143 aa4.57□□□□□ -1.68
Ddx42-201ENSMUST00000021046 Muc16A0A140LJ72 8478 aa4.56□□□□□ -1.68
Ddx42-201ENSMUST00000021046 Gm18596A0A1W2P860 280 aa4.56□□□□□ -1.68
Ddx42-201ENSMUST00000021046 Krtap22-2J3QNX6 67 aa4.56□□□□□ -1.68
Ddx42-201ENSMUST00000021046 Mt2P02798 61 aa4.55□□□□□ -1.68
Ddx42-201ENSMUST00000021046 Krtap19-2Q925I0 141 aa4.55□□□□□ -1.68
Ddx42-201ENSMUST00000021046 Birc6O88738 4882 aa4.52□□□□□ -1.69
Ddx42-201ENSMUST00000021046 ZanO88799 5376 aa4.5□□□□□ -1.69
Ddx42-201ENSMUST00000021046 Sprr2dO70555 85 aa4.48□□□□□ -1.69
Ddx42-201ENSMUST00000021046 Lce3eF8VQJ0 98 aa4.47□□□□□ -1.69
Ddx42-201ENSMUST00000021046 Lce3fQ6PAI4 98 aa4.47□□□□□ -1.69
Ddx42-201ENSMUST00000021046 Lce3aQ497I5 98 aa4.46□□□□□ -1.69
Ddx42-201ENSMUST00000021046 Lce1mQ9CR91 182 aa4.46□□□□□ -1.7
Ddx42-201ENSMUST00000021046 Sprr2iO70560 76 aa4.45□□□□□ -1.7
Ddx42-201ENSMUST00000021046 Krtap1-3A2A588 173 aa4.45□□□□□ -1.7
Ddx42-201ENSMUST00000021046 Lce1cQ9D1C5 147 aa4.39□□□□□ -1.71
Ddx42-201ENSMUST00000021046 Sprr2fO70557 76 aa4.38□□□□□ -1.71
Ddx42-201ENSMUST00000021046 4932415D10RikA0A1W2P6U8 4986 aa4.38□□□□□ -1.71
Ddx42-201ENSMUST00000021046 Rnf213E9Q555 5152 aaKnown RBP4.37□□□□□ -1.71
Ddx42-201ENSMUST00000021046 Krtap4-16Q91W93 202 aa4.34□□□□□ -1.71
Ddx42-201ENSMUST00000021046 Krtap19-4Q925H7 84 aa4.32□□□□□ -1.72
Ddx42-201ENSMUST00000021046 Mdn1A2ANY6 5589 aaKnown RBP4.29□□□□□ -1.72
Ddx42-201ENSMUST00000021046 Krtap4-1Q3UUY3 169 aa4.25□□□□□ -1.73
Ddx42-201ENSMUST00000021046 Lce1fB9EJP6 147 aa4.24□□□□□ -1.73
Ddx42-201ENSMUST00000021046 Lce1a1Q9CQH5 143 aa4.24□□□□□ -1.73
Ddx42-201ENSMUST00000021046 ObscnA2AAJ9 8891 aaKnown RBP4.19□□□□□ -1.74
Ddx42-201ENSMUST00000021046 Sprr2hO70559 108 aa4.12□□□□□ -1.75
Ddx42-201ENSMUST00000021046 Sprr2kO70562 68 aa4.11□□□□□ -1.75
Ddx42-201ENSMUST00000021046 Prm1P02319 51 aa4.11□□□□□ -1.75
Ddx42-201ENSMUST00000021046 Gm10024A0A0A0MQA4 119 aa4.11□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 74 ms