RNA–Protein interactions for RNA: ENSMUST00000021046.5

Ddx42-201, Transcript of ATP-dependent RNA helicase DDX42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx42, Length 4,011 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42-201ENSMUST00000021046 Rpgrip1Q9EPQ2 1331 aa23.53■■□□□ 1.36
Ddx42-201ENSMUST00000021046 Rhox8Q6VSS7 320 aa22.79■■□□□ 1.24
Ddx42-201ENSMUST00000021046 Ehmt2Q9Z148 1263 aaKnown RBP22.72■■□□□ 1.23
Ddx42-201ENSMUST00000021046 Las1lA2BE28 776 aaKnown RBP22.47■■□□□ 1.19
Ddx42-201ENSMUST00000021046 Pcgf6Q99NA9 353 aa22.37■■□□□ 1.17
Ddx42-201ENSMUST00000021046 Acin1Q9JIX8 1338 aaKnown RBP22.29■■□□□ 1.16
Ddx42-201ENSMUST00000021046 CenpbP27790 599 aa21.82■■□□□ 1.08
Ddx42-201ENSMUST00000021046 Zeb1Q64318 1117 aa21.69■■□□□ 1.06
Ddx42-201ENSMUST00000021046 Supt5hO55201 1082 aaKnown RBP21.66■■□□□ 1.06
Ddx42-201ENSMUST00000021046 DiexfQ8BTT6 772 aaKnown RBP21.65■■□□□ 1.06
Ddx42-201ENSMUST00000021046 Myt1Q8CFC2 1127 aa21.61■■□□□ 1.05
Ddx42-201ENSMUST00000021046 Neurod1Q60867 357 aa21.58■■□□□ 1.04
Ddx42-201ENSMUST00000021046 Cngb1E1AZ71 1325 aa21.55■■□□□ 1.04
Ddx42-201ENSMUST00000021046 Wdr66E9Q743 1299 aa21.23■□□□□ 0.99
Ddx42-201ENSMUST00000021046 1700123L14RikQ3V2K7 440 aa21.12■□□□□ 0.97
Ddx42-201ENSMUST00000021046 Csrnp3P59055 597 aa21.11■□□□□ 0.97
Ddx42-201ENSMUST00000021046 Amer1Q7TS75 1132 aa21.1■□□□□ 0.97
Ddx42-201ENSMUST00000021046 Gm38655A0A286YDK6 273 aa20.91■□□□□ 0.94
Ddx42-201ENSMUST00000021046 Cdk11bP24788 784 aaKnown RBP20.85■□□□□ 0.93
Ddx42-201ENSMUST00000021046 Ccdc180J3QNE4 1664 aa20.83■□□□□ 0.93
Ddx42-201ENSMUST00000021046 Bcl11aQ9QYE3 773 aa20.81■□□□□ 0.92
Ddx42-201ENSMUST00000021046 Anks4bQ8K3X6 423 aa20.8■□□□□ 0.92
Ddx42-201ENSMUST00000021046 NefmP08553 848 aa20.72■□□□□ 0.91
Ddx42-201ENSMUST00000021046 Nop58Q6DFW4 536 aaKnown RBP20.69■□□□□ 0.9
Ddx42-201ENSMUST00000021046 Pelp1Q9DBD5 1123 aaKnown RBP20.69■□□□□ 0.9
Ddx42-201ENSMUST00000021046 Aplp2Q06335 707 aa20.68■□□□□ 0.9
Ddx42-201ENSMUST00000021046 Ccdc136Q3TVA9 1136 aa20.64■□□□□ 0.89
Ddx42-201ENSMUST00000021046 Ppargc1bQ8VHJ7 1014 aa20.63■□□□□ 0.89
Ddx42-201ENSMUST00000021046 Trim41Q5NCC3 630 aa20.62■□□□□ 0.89
Ddx42-201ENSMUST00000021046 Sall2Q9QX96 1004 aa20.62■□□□□ 0.89
Ddx42-201ENSMUST00000021046 Ttbk1Q6PCN3 1308 aa20.59■□□□□ 0.89
Ddx42-201ENSMUST00000021046 HrcG5E8J6 738 aa20.49■□□□□ 0.87
Ddx42-201ENSMUST00000021046 Rtl1Q7M732 1744 aa20.39■□□□□ 0.85
Ddx42-201ENSMUST00000021046 Gab3Q8BSM5 595 aa20.37■□□□□ 0.85
Ddx42-201ENSMUST00000021046 NischQ80TM9 1593 aa20.33■□□□□ 0.85
Ddx42-201ENSMUST00000021046 Dcaf1Q80TR8 1506 aa20.27■□□□□ 0.84
Ddx42-201ENSMUST00000021046 Fam71e1A1L3C1 212 aa20.26■□□□□ 0.83
Ddx42-201ENSMUST00000021046 PrkcshO08795 521 aa20.26■□□□□ 0.83
Ddx42-201ENSMUST00000021046 Mapk8ip2Q9ERE9 830 aa20.2■□□□□ 0.82
Ddx42-201ENSMUST00000021046 Mier1Q5UAK0 511 aa20.17■□□□□ 0.82
Ddx42-201ENSMUST00000021046 Tnnt3Q9QZ47 272 aa20.11■□□□□ 0.81
Ddx42-201ENSMUST00000021046 UbtfP25976 765 aaKnown RBP20.07■□□□□ 0.8
Ddx42-201ENSMUST00000021046 Rtl5Q5DTT4 599 aa20.01■□□□□ 0.79
Ddx42-201ENSMUST00000021046 ClspnQ80YR7 1315 aa19.98■□□□□ 0.79
Ddx42-201ENSMUST00000021046 Anp32aO35381 247 aa19.96■□□□□ 0.79
Ddx42-201ENSMUST00000021046 Ifnlr1Q8CGK5 535 aa19.89■□□□□ 0.78
Ddx42-201ENSMUST00000021046 SafbD3YXK2 937 aaKnown RBP19.85■□□□□ 0.77
Ddx42-201ENSMUST00000021046 Slc24a1Q91WD8 1130 aa19.85■□□□□ 0.77
Ddx42-201ENSMUST00000021046 Aebp2Q9Z248 504 aaKnown RBP19.83■□□□□ 0.77
Ddx42-201ENSMUST00000021046 4933416C03RikQ3V063 378 aa19.83■□□□□ 0.76
Ddx42-201ENSMUST00000021046 Stra8P70278 393 aa19.78■□□□□ 0.76
Ddx42-201ENSMUST00000021046 Ap3b1Q9Z1T1 1105 aa19.73■□□□□ 0.75
Ddx42-201ENSMUST00000021046 TonslQ6NZL6 1363 aa19.67■□□□□ 0.74
Ddx42-201ENSMUST00000021046 Hnrnpul2Q00PI9 745 aaKnown RBP19.65■□□□□ 0.74
Ddx42-201ENSMUST00000021046 Eif5bQ05D44 1216 aaKnown RBP19.54■□□□□ 0.72
Ddx42-201ENSMUST00000021046 Myt1lP97500 1187 aa19.49■□□□□ 0.71
Ddx42-201ENSMUST00000021046 Hdac5Q9Z2V6 1113 aa19.46■□□□□ 0.71
Ddx42-201ENSMUST00000021046 DaxxO35613 739 aa19.45■□□□□ 0.7
Ddx42-201ENSMUST00000021046 Calr4Q3TQS0 420 aa19.42■□□□□ 0.7
Ddx42-201ENSMUST00000021046 Ppp4r2Q0VGB7 417 aa19.4■□□□□ 0.7
Ddx42-201ENSMUST00000021046 Pknox2Q8BG99 474 aa19.38■□□□□ 0.69
Ddx42-201ENSMUST00000021046 Irx3P81067 507 aa19.27■□□□□ 0.68
Ddx42-201ENSMUST00000021046 Abcc9P70170 1546 aa19.24■□□□□ 0.67
Ddx42-201ENSMUST00000021046 NclP09405 707 aaKnown RBP19.22■□□□□ 0.67
Ddx42-201ENSMUST00000021046 Gtf3c3Q3TMP1 882 aa19.22■□□□□ 0.67
Ddx42-201ENSMUST00000021046 Hsp90aa1P07901 733 aaKnown RBP19.22■□□□□ 0.67
Ddx42-201ENSMUST00000021046 Ccdc27Q3V036 639 aa19.21■□□□□ 0.67
Ddx42-201ENSMUST00000021046 Ccdc9Q8VC31 543 aaKnown RBP19.21■□□□□ 0.67
Ddx42-201ENSMUST00000021046 Wdr43Q6ZQL4 677 aaKnown RBP19.2■□□□□ 0.66
Ddx42-201ENSMUST00000021046 Upf2A2AT37 1269 aaKnown RBP19.17■□□□□ 0.66
Ddx42-201ENSMUST00000021046 Esf1Q3V1V3 845 aaKnown RBP19.15■□□□□ 0.66
Ddx42-201ENSMUST00000021046 Plcd4Q8K3R3 807 aa19.15■□□□□ 0.66
Ddx42-201ENSMUST00000021046 Supt16hQ920B9 1047 aa19.15■□□□□ 0.66
Ddx42-201ENSMUST00000021046 Nolc1E9Q5C9 702 aaKnown RBP19.15■□□□□ 0.66
Ddx42-201ENSMUST00000021046 Zcchc6Q5BLK4 1491 aaKnown RBP19.15■□□□□ 0.66
Ddx42-201ENSMUST00000021046 Eid3Q3V124 375 aa19.14■□□□□ 0.65
Ddx42-201ENSMUST00000021046 Ube2uB1AUC4 352 aa19.13■□□□□ 0.65
Ddx42-201ENSMUST00000021046 Cep164Q5DU05 1446 aa19.11■□□□□ 0.65
Ddx42-201ENSMUST00000021046 Npm2Q80W85 207 aa19.08■□□□□ 0.64
Ddx42-201ENSMUST00000021046 NrdcQ8BHG1 1161 aa19.06■□□□□ 0.64
Ddx42-201ENSMUST00000021046 Il27Q8K3I6 234 aa19.02■□□□□ 0.64
Ddx42-201ENSMUST00000021046 Chic1Q8CBW7 227 aa18.99■□□□□ 0.63
Ddx42-201ENSMUST00000021046 Taok2Q6ZQ29 1240 aa18.96■□□□□ 0.63
Ddx42-201ENSMUST00000021046 Fgd1P52734 960 aa18.92■□□□□ 0.62
Ddx42-201ENSMUST00000021046 4930567H17RikQ3V0K5 233 aa18.87■□□□□ 0.61
Ddx42-201ENSMUST00000021046 Plekhg3Q4VAC9 1341 aa18.87■□□□□ 0.61
Ddx42-201ENSMUST00000021046 P3h3Q8CG70 732 aa18.84■□□□□ 0.61
Ddx42-201ENSMUST00000021046 NeflP08551 543 aa18.81■□□□□ 0.6
Ddx42-201ENSMUST00000021046 Slc4a3P16283 1227 aa18.79■□□□□ 0.6
Ddx42-201ENSMUST00000021046 Rtn4Q99P72 1162 aaKnown RBP18.79■□□□□ 0.6
Ddx42-201ENSMUST00000021046 Fam50aQ9WV03 339 aaKnown RBP18.77■□□□□ 0.6
Ddx42-201ENSMUST00000021046 Zbtb7cQ8VCZ7 619 aa18.75■□□□□ 0.59
Ddx42-201ENSMUST00000021046 Zbtb4Q5F293 982 aa18.74■□□□□ 0.59
Ddx42-201ENSMUST00000021046 Ipo4Q8VI75 1082 aa18.64■□□□□ 0.57
Ddx42-201ENSMUST00000021046 Pak3Q61036 559 aa18.63■□□□□ 0.57
Ddx42-201ENSMUST00000021046 ArxO35085 564 aa18.62■□□□□ 0.57
Ddx42-201ENSMUST00000021046 CanxP35564 591 aaKnown RBP18.6■□□□□ 0.57
Ddx42-201ENSMUST00000021046 Ipo9Q91YE6 1041 aa18.6■□□□□ 0.57
Ddx42-201ENSMUST00000021046 Mrs2Q5NCE8 434 aa18.6■□□□□ 0.57
Ddx42-201ENSMUST00000021046 Znf710Q3U288 666 aa18.58■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms