RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W BNA1P47096 177 aa3.32□□□□□ -1.88
SHS1YDL225W YNL058CP53947 316 aa3.32□□□□□ -1.88
SHS1YDL225W GTR1Q00582 310 aa3.32□□□□□ -1.88
SHS1YDL225W ECM16Q04217 1267 aaKnown RBP3.32□□□□□ -1.88
SHS1YDL225W TFC6Q06339 672 aa3.32□□□□□ -1.88
SHS1YDL225W CSR1Q06705 408 aaKnown RBP3.32□□□□□ -1.88
SHS1YDL225W CYK3Q07533 885 aa3.32□□□□□ -1.88
SHS1YDL225W YPL191CQ08930 360 aa3.32□□□□□ -1.88
SHS1YDL225W TRM8Q12009 286 aa3.32□□□□□ -1.88
SHS1YDL225W PCD1Q12524 340 aa3.32□□□□□ -1.88
SHS1YDL225W ATP2P00830 511 aaKnown RBP3.31□□□□□ -1.88
SHS1YDL225W SNF1P06782 633 aaKnown RBP3.31□□□□□ -1.88
SHS1YDL225W GSY2P27472 705 aa3.31□□□□□ -1.88
SHS1YDL225W NUP120P35729 1037 aa3.31□□□□□ -1.88
SHS1YDL225W HOT13P36078 116 aa3.31□□□□□ -1.88
SHS1YDL225W CIR1P42940 261 aa3.31□□□□□ -1.88
SHS1YDL225W YGR079WP53249 370 aa3.31□□□□□ -1.88
SHS1YDL225W AAT1Q01802 451 aa3.31□□□□□ -1.88
SHS1YDL225W YML131WQ03102 365 aa3.31□□□□□ -1.88
SHS1YDL225W GTB1Q04924 702 aa3.31□□□□□ -1.88
SHS1YDL225W VAM6Q07468 1049 aa3.31□□□□□ -1.88
SHS1YDL225W PRS5Q12265 496 aaKnown RBP3.31□□□□□ -1.88
SHS1YDL225W RTC1Q08281 1341 aa3.31□□□□□ -1.88
SHS1YDL225W BI2P03873 423 aa3.3□□□□□ -1.88
SHS1YDL225W TPK1P06244 397 aa3.3□□□□□ -1.88
SHS1YDL225W SES1P07284 462 aaKnown RBP3.3□□□□□ -1.88
SHS1YDL225W ERG11P10614 530 aa3.3□□□□□ -1.88
SHS1YDL225W PFK2P16862 959 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SHS1YDL225W KES1P35844 434 aaKnown RBP3.3□□□□□ -1.88
SHS1YDL225W APD1P38281 316 aa3.3□□□□□ -1.88
SHS1YDL225W ERC1P38767 581 aa3.3□□□□□ -1.88
SHS1YDL225W FUN12P39730 1002 aaKnown RBP3.3□□□□□ -1.88
SHS1YDL225W UBX6P47049 396 aa3.3□□□□□ -1.88
SHS1YDL225W CTF18P49956 741 aa3.3□□□□□ -1.88
SHS1YDL225W COG1P53079 417 aa3.3□□□□□ -1.88
SHS1YDL225W RRT6P53117 311 aaPredicted RBP3.3□□□□□ -1.88
SHS1YDL225W YAT1P80235 687 aa3.3□□□□□ -1.88
SHS1YDL225W RDL1Q12305 139 aaKnown RBP3.3□□□□□ -1.88
SHS1YDL225W YML003WP0CF16 290 aa3.3□□□□□ -1.88
SHS1YDL225W RFA2P26754 273 aaKnown RBP3.3□□□□□ -1.88
SHS1YDL225W RAD16P31244 790 aa3.3□□□□□ -1.88
SHS1YDL225W HES1P35843 434 aa3.3□□□□□ -1.88
SHS1YDL225W GEX2P36173 615 aa3.3□□□□□ -1.88
SHS1YDL225W UME6P39001 836 aa3.3□□□□□ -1.88
SHS1YDL225W COQ11Q05892 277 aa3.3□□□□□ -1.88
SHS1YDL225W ATG23Q06671 453 aa3.3□□□□□ -1.88
SHS1YDL225W SWT1Q12104 458 aa3.3□□□□□ -1.88
SHS1YDL225W YNL162W-AQ3E7A8 72 aa3.3□□□□□ -1.88
SHS1YDL225W MAK32P23060 363 aa3.29□□□□□ -1.88
SHS1YDL225W PTC6P25646 442 aa3.29□□□□□ -1.88
SHS1YDL225W LAC1P28496 418 aa3.29□□□□□ -1.88
SHS1YDL225W IMD2P38697 523 aaKnown RBP3.29□□□□□ -1.88
SHS1YDL225W IMD3P50095 523 aaKnown RBP3.29□□□□□ -1.88
SHS1YDL225W ATP23P53722 227 aa3.29□□□□□ -1.88
SHS1YDL225W CSL4P53859 292 aaPredicted RBP3.29□□□□□ -1.88
SHS1YDL225W YDR109CQ04585 715 aa3.29□□□□□ -1.88
SHS1YDL225W VID22Q05934 901 aa3.29□□□□□ -1.88
SHS1YDL225W THI7Q05998 598 aa3.29□□□□□ -1.88
SHS1YDL225W SPN1Q06505 410 aaPredicted RBP3.29□□□□□ -1.88
SHS1YDL225W SSP2Q08646 371 aa3.29□□□□□ -1.88
SHS1YDL225W TOP1P04786 769 aa3.28□□□□□ -1.88
SHS1YDL225W ILV2P07342 687 aaKnown RBP3.28□□□□□ -1.88
SHS1YDL225W TY2A-LR1P0C2J4 438 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-FP0CX61 438 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-GR2P0CX62 438 aa3.28□□□□□ -1.88
SHS1YDL225W NUP1P20676 1076 aa3.28□□□□□ -1.88
SHS1YDL225W APN1P22936 367 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-CP25383 438 aa3.28□□□□□ -1.88
SHS1YDL225W LRE1P25579 583 aaKnown RBP3.28□□□□□ -1.88
SHS1YDL225W ORC2P32833 620 aa3.28□□□□□ -1.88
SHS1YDL225W SLC1P33333 303 aa3.28□□□□□ -1.88
SHS1YDL225W TEF4P36008 412 aaKnown RBP3.28□□□□□ -1.88
SHS1YDL225W RRN3P36070 627 aa3.28□□□□□ -1.88
SHS1YDL225W KAP123P40069 1113 aaKnown RBP3.28□□□□□ -1.88
SHS1YDL225W YIL161WP40449 235 aaKnown RBP3.28□□□□□ -1.88
SHS1YDL225W DJP1P40564 432 aa3.28□□□□□ -1.88
SHS1YDL225W MSY1P48527 492 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-DR2Q03483 438 aa3.28□□□□□ -1.88
SHS1YDL225W BSP1Q06604 576 aa3.28□□□□□ -1.88
SHS1YDL225W RAD34Q06665 692 aa3.28□□□□□ -1.88
SHS1YDL225W TMA16Q08687 178 aa3.28□□□□□ -1.88
SHS1YDL225W YOR389WQ08912 624 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-BQ12260 438 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-OR2Q12293 438 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-DR1Q12392 438 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-OR1Q12439 438 aa3.28□□□□□ -1.88
SHS1YDL225W TY2A-DR3Q99303 438 aa3.28□□□□□ -1.88
SHS1YDL225W SPO16P17122 198 aa3.27□□□□□ -1.89
SHS1YDL225W RER1P25560 188 aa3.27□□□□□ -1.89
SHS1YDL225W SSH4P32343 579 aa3.27□□□□□ -1.89
SHS1YDL225W GSH1P32477 678 aa3.27□□□□□ -1.89
SHS1YDL225W YER010CP40011 234 aa3.27□□□□□ -1.89
SHS1YDL225W IST3P40565 148 aaPredicted RBP3.27□□□□□ -1.89
SHS1YDL225W PSP1P50896 841 aaKnown RBP3.27□□□□□ -1.89
SHS1YDL225W NEW1Q08972 1196 aaKnown RBP3.27□□□□□ -1.89
SHS1YDL225W FRE7Q12333 620 aa3.27□□□□□ -1.89
SHS1YDL225W PGK1P00560 416 aaKnown RBP3.27□□□□□ -1.89
SHS1YDL225W GUK1P15454 187 aaKnown RBP3.27□□□□□ -1.89
SHS1YDL225W YSP3P25036 478 aa3.27□□□□□ -1.89
SHS1YDL225W RPT3P33298 428 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms