RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Gm44790A0A0N4SV91 103 aa8.81□□□□□ -1
Msh3-205ENSMUST00000187424 Gm26920S4R2A5 56 aa8.79□□□□□ -1
Msh3-205ENSMUST00000187424 Mtatp8P03930 67 aa8.77□□□□□ -1.01
Msh3-205ENSMUST00000187424 Trav14d-3-dv8A0A075B619 120 aa8.75□□□□□ -1.01
Msh3-205ENSMUST00000187424 Krtap4-2B1AQ85 167 aa8.75□□□□□ -1.01
Msh3-205ENSMUST00000187424 Tmem213Q08EA8 116 aa8.74□□□□□ -1.01
Msh3-205ENSMUST00000187424 Gm37013Q8K491 104 aa8.74□□□□□ -1.01
Msh3-205ENSMUST00000187424 LorP18165 486 aa8.73□□□□□ -1.01
Msh3-205ENSMUST00000187424 Pcp4l1Q6W8Q3 68 aa8.73□□□□□ -1.01
Msh3-205ENSMUST00000187424 Pde6gP09174 87 aa8.72□□□□□ -1.01
Msh3-205ENSMUST00000187424 Mrpl34Q99N91 92 aa8.72□□□□□ -1.01
Msh3-205ENSMUST00000187424 Cypt15B1AXS0 87 aa8.71□□□□□ -1.02
Msh3-205ENSMUST00000187424 UqcrqQ9CQ69 82 aa8.71□□□□□ -1.02
Msh3-205ENSMUST00000187424 Gm10061D3Z714 54 aa8.7□□□□□ -1.02
Msh3-205ENSMUST00000187424 C130032M10RikQ8C888 123 aa8.7□□□□□ -1.02
Msh3-205ENSMUST00000187424 Cby1Q9D1C2 127 aa8.7□□□□□ -1.02
Msh3-205ENSMUST00000187424 Rnf213E9Q555 5152 aaKnown RBP8.69□□□□□ -1.02
Msh3-205ENSMUST00000187424 Gm9821Q8K076 103 aa8.67□□□□□ -1.02
Msh3-205ENSMUST00000187424 Gm20604F8WIA3 75 aa8.65□□□□□ -1.02
Msh3-205ENSMUST00000187424 Gm28051J3QMA2 81 aa8.65□□□□□ -1.02
Msh3-205ENSMUST00000187424 Crct1Q6PAI5 102 aa8.65□□□□□ -1.02
Msh3-205ENSMUST00000187424 Defa21Q8C1P2 93 aa8.65□□□□□ -1.02
Msh3-205ENSMUST00000187424 Krtap15-1Q9QZU5 150 aa8.65□□□□□ -1.02
Msh3-205ENSMUST00000187424 Xcl1P47993 114 aa8.64□□□□□ -1.03
Msh3-205ENSMUST00000187424 Gm11569B1AQB1 180 aa8.63□□□□□ -1.03
Msh3-205ENSMUST00000187424 Ormdl1Q921I0 153 aa8.62□□□□□ -1.03
Msh3-205ENSMUST00000187424 Gm26620Q9CY65 116 aa8.62□□□□□ -1.03
Msh3-205ENSMUST00000187424 Reg3aO09037 175 aa8.61□□□□□ -1.03
Msh3-205ENSMUST00000187424 2310057N15RikQ9D6T8 200 aa8.6□□□□□ -1.03
Msh3-205ENSMUST00000187424 Lce1gQ9D195 139 aa8.55□□□□□ -1.04
Msh3-205ENSMUST00000187424 Igkv3-3A0A140T8Q0 119 aa8.53□□□□□ -1.04
Msh3-205ENSMUST00000187424 Rpl37Q9D823 97 aa8.53□□□□□ -1.04
Msh3-205ENSMUST00000187424 Sec61bQ9CQS8 96 aaKnown RBP8.5□□□□□ -1.05
Msh3-205ENSMUST00000187424 MplkipQ9D011 178 aa8.5□□□□□ -1.05
Msh3-205ENSMUST00000187424 2310034C09RikQ9D746 214 aa8.47□□□□□ -1.05
Msh3-205ENSMUST00000187424 Lyrm7Q9DA03 104 aa8.47□□□□□ -1.05
Msh3-205ENSMUST00000187424 Igkv8-19A0A0G2JFN8 121 aa8.44□□□□□ -1.06
Msh3-205ENSMUST00000187424 Syne2Q6ZWQ0 6874 aaKnown RBP8.43□□□□□ -1.06
Msh3-205ENSMUST00000187424 Gm10267M0QWD8 85 aa8.42□□□□□ -1.06
Msh3-205ENSMUST00000187424 Ubl5Q9EPV8 73 aa8.42□□□□□ -1.06
Msh3-205ENSMUST00000187424 Defb13Q8R2I4 64 aa8.39□□□□□ -1.07
Msh3-205ENSMUST00000187424 BikO70337 150 aa8.38□□□□□ -1.07
Msh3-205ENSMUST00000187424 Krtap19-3Q925H6 87 aa8.36□□□□□ -1.07
Msh3-205ENSMUST00000187424 SspoQ8CG65 4998 aa8.34□□□□□ -1.07
Msh3-205ENSMUST00000187424 Krtap3-2Q9D638 99 aa8.34□□□□□ -1.07
Msh3-205ENSMUST00000187424 Krtap3-3Q9D7P0 99 aa8.34□□□□□ -1.07
Msh3-205ENSMUST00000187424 Krtap19-1Q925H2 87 aa8.33□□□□□ -1.08
Msh3-205ENSMUST00000187424 7530416G11RikJ3QJX6 159 aa8.32□□□□□ -1.08
Msh3-205ENSMUST00000187424 Gm11555B1AQ89 175 aa8.31□□□□□ -1.08
Msh3-205ENSMUST00000187424 Krtap16-3Q8C1I6 86 aa8.31□□□□□ -1.08
Msh3-205ENSMUST00000187424 Scgb1b2O35176 93 aa8.3□□□□□ -1.08
Msh3-205ENSMUST00000187424 Krtap1-4Q3V2D6 188 aa8.3□□□□□ -1.08
Msh3-205ENSMUST00000187424 Prr15lQ8JZM2 100 aa8.29□□□□□ -1.08
Msh3-205ENSMUST00000187424 Trav3-1Q5R1I8 114 aa8.28□□□□□ -1.08
Msh3-205ENSMUST00000187424 Rnase13Q5GAM7 153 aa8.24□□□□□ -1.09
Msh3-205ENSMUST00000187424 Pxt1Q8K459 51 aa8.24□□□□□ -1.09
Msh3-205ENSMUST00000187424 Tmem254aP0DN89 123 aa8.23□□□□□ -1.09
Msh3-205ENSMUST00000187424 Tmem254bP0DN90 123 aa8.23□□□□□ -1.09
Msh3-205ENSMUST00000187424 Tmem254cP0DN91 123 aa8.23□□□□□ -1.09
Msh3-205ENSMUST00000187424 1700042G07RikB1AUF7 90 aa8.22□□□□□ -1.09
Msh3-205ENSMUST00000187424 Gtf2h5Q8K2X8 71 aa8.22□□□□□ -1.09
Msh3-205ENSMUST00000187424 Gm10318A0A1W2P728 225 aa8.21□□□□□ -1.1
Msh3-205ENSMUST00000187424 Gm11596B1AQB0 205 aa8.2□□□□□ -1.1
Msh3-205ENSMUST00000187424 A0A286YE49 62 aa8.17□□□□□ -1.1
Msh3-205ENSMUST00000187424 Apoc4Q61268 124 aa8.17□□□□□ -1.1
Msh3-205ENSMUST00000187424 Lce1jD3YUU5 139 aa8.13□□□□□ -1.11
Msh3-205ENSMUST00000187424 Gm4491E0CX42 125 aa8.12□□□□□ -1.11
Msh3-205ENSMUST00000187424 Hist1h4aP62806 103 aaKnown RBP8.12□□□□□ -1.11
Msh3-205ENSMUST00000187424 Spink8Q09TK9 105 aa8.12□□□□□ -1.11
Msh3-205ENSMUST00000187424 Samd13D3YUG0 102 aa8.11□□□□□ -1.11
Msh3-205ENSMUST00000187424 Fam229bQ8CF36 80 aa8.1□□□□□ -1.11
Msh3-205ENSMUST00000187424 Gm17416Q30KP4 66 aa8.07□□□□□ -1.12
Msh3-205ENSMUST00000187424 Naa38Q9D2U5 125 aa8.06□□□□□ -1.12
Msh3-205ENSMUST00000187424 Muc5bE9Q5I3 4800 aa8.05□□□□□ -1.12
Msh3-205ENSMUST00000187424 Fam229aB2KGE5 128 aa8.03□□□□□ -1.12
Msh3-205ENSMUST00000187424 1700074P13RikQ9D9G7 251 aa8.02□□□□□ -1.13
Msh3-205ENSMUST00000187424 Gm28539A0A087WSL9 92 aa7.99□□□□□ -1.13
Msh3-205ENSMUST00000187424 Fam240bJ3QMB3 78 aa7.97□□□□□ -1.13
Msh3-205ENSMUST00000187424 Krtap4-6Q3V4B7 195 aa7.97□□□□□ -1.13
Msh3-205ENSMUST00000187424 Bud31Q6PGH1 103 aa7.92□□□□□ -1.14
Msh3-205ENSMUST00000187424 Q8BGJ3 129 aa7.92□□□□□ -1.14
Msh3-205ENSMUST00000187424 Krtap13-1Q8K198 168 aa7.92□□□□□ -1.14
Msh3-205ENSMUST00000187424 Gm10999F6Q4M4 69 aa7.9□□□□□ -1.14
Msh3-205ENSMUST00000187424 Gm45213A0A0U1RNZ6 101 aa7.89□□□□□ -1.15
Msh3-205ENSMUST00000187424 Chtf8P0CG14 533 aa7.88□□□□□ -1.15
Msh3-205ENSMUST00000187424 BatfO35284 125 aa7.87□□□□□ -1.15
Msh3-205ENSMUST00000187424 Defb38Q7TNV7 63 aa7.85□□□□□ -1.15
Msh3-205ENSMUST00000187424 Ndufc1Q9CQY9 76 aa7.85□□□□□ -1.15
Msh3-205ENSMUST00000187424 Krtap4-1Q3UUY3 169 aa7.83□□□□□ -1.16
Msh3-205ENSMUST00000187424 Mdn1A2ANY6 5589 aaKnown RBP7.82□□□□□ -1.16
Msh3-205ENSMUST00000187424 9230102O04RikA2ASX7 82 aa7.81□□□□□ -1.16
Msh3-205ENSMUST00000187424 2210017I01RikA0A0A6YVV1 95 aa7.8□□□□□ -1.16
Msh3-205ENSMUST00000187424 Krtap1-5A2A590 122 aa7.8□□□□□ -1.16
Msh3-205ENSMUST00000187424 2310079G19RikQ9D6L6 185 aa7.78□□□□□ -1.16
Msh3-205ENSMUST00000187424 Gm21798J3QNU5 87 aa7.76□□□□□ -1.17
Msh3-205ENSMUST00000187424 B930094E09RikQ8C4T2 136 aa7.74□□□□□ -1.17
Msh3-205ENSMUST00000187424 Atp5eP56382 52 aa7.7□□□□□ -1.18
Msh3-205ENSMUST00000187424 4930518I15RikQ3V2W7 57 aa7.7□□□□□ -1.18
Msh3-205ENSMUST00000187424 4930507D05RikQ8C9C9 103 aa7.7□□□□□ -1.18
Msh3-205ENSMUST00000187424 Gm11564A2A4L9 201 aa7.69□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms