RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Gm10065F6TJM2 114 aa10.42□□□□□ -0.74
Ckap4-202ENSMUST00000167671 Krtap29-1A2A5X4 342 aa10.39□□□□□ -0.75
Ckap4-202ENSMUST00000167671 Sec61gP60060 68 aa10.39□□□□□ -0.75
Ckap4-202ENSMUST00000167671 1600014C23RikQ9DAX4 101 aa10.39□□□□□ -0.75
Ckap4-202ENSMUST00000167671 Cypt14J3QPF7 87 aa10.37□□□□□ -0.75
Ckap4-202ENSMUST00000167671 Gm21798J3QNU5 87 aa10.36□□□□□ -0.75
Ckap4-202ENSMUST00000167671 Gm16253D3Z167 63 aa10.34□□□□□ -0.75
Ckap4-202ENSMUST00000167671 Znf706Q9D115 76 aaKnown RBP10.34□□□□□ -0.75
Ckap4-202ENSMUST00000167671 Defb13Q8R2I4 64 aa10.33□□□□□ -0.76
Ckap4-202ENSMUST00000167671 PrkdcP97313 4128 aa10.32□□□□□ -0.76
Ckap4-202ENSMUST00000167671 Dnah5Q8VHE6 4621 aa10.32□□□□□ -0.76
Ckap4-202ENSMUST00000167671 Fras1Q80T14 4010 aa10.32□□□□□ -0.76
Ckap4-202ENSMUST00000167671 NbdyA0A0N4SUI7 68 aa10.32□□□□□ -0.76
Ckap4-202ENSMUST00000167671 Ndufb1P0DN34 57 aa10.31□□□□□ -0.76
Ckap4-202ENSMUST00000167671 Gm3646F6S692 53 aa10.3□□□□□ -0.76
Ckap4-202ENSMUST00000167671 PlecQ9QXS1 4691 aaKnown RBP10.29□□□□□ -0.76
Ckap4-202ENSMUST00000167671 Dnah7cA0A087WR13 4024 aa10.27□□□□□ -0.77
Ckap4-202ENSMUST00000167671 Gm4707V9GXN5 68 aa10.26□□□□□ -0.77
Ckap4-202ENSMUST00000167671 Defb39Q70KL3 74 aa10.25□□□□□ -0.77
Ckap4-202ENSMUST00000167671 Wfdc3Q14AE4 130 aa10.24□□□□□ -0.77
Ckap4-202ENSMUST00000167671 TnxbO35452 4006 aa10.22□□□□□ -0.77
Ckap4-202ENSMUST00000167671 Krtap14O08640 167 aa10.21□□□□□ -0.77
Ckap4-202ENSMUST00000167671 Spaca4Q80ZQ0 127 aa10.2□□□□□ -0.78
Ckap4-202ENSMUST00000167671 1700042G07RikB1AUF7 90 aa10.19□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Gm26620Q9CY65 116 aa10.19□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Cypt15B1AXS0 87 aa10.19□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Gm9918Q8BUR5 174 aa10.18□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Ccdc179J3QM76 67 aa10.18□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Krtap10-4Q08EG8 221 aa10.17□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Gm10643Q3URG9 111 aa10.16□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Tnp2P11378 117 aa10.16□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Gm10999F6Q4M4 69 aa10.15□□□□□ -0.78
Ckap4-202ENSMUST00000167671 Krtap13O88375 197 aa10.14□□□□□ -0.79
Ckap4-202ENSMUST00000167671 Gpr15lA0A0B4J1N3 78 aa10.12□□□□□ -0.79
Ckap4-202ENSMUST00000167671 Limd2Q8BGB5 128 aa10.12□□□□□ -0.79
Ckap4-202ENSMUST00000167671 Hectd4E9Q2E4 4418 aa10.12□□□□□ -0.79
Ckap4-202ENSMUST00000167671 2310050C09RikG5E8Z3 280 aa10.12□□□□□ -0.79
Ckap4-202ENSMUST00000167671 Ndufs5Q99LY9 106 aa10.12□□□□□ -0.79
Ckap4-202ENSMUST00000167671 Uqcr11Q9CPX8 56 aa10.12□□□□□ -0.79
Ckap4-202ENSMUST00000167671 Dnah7aE9Q0T8 4024 aa10.09□□□□□ -0.79
Ckap4-202ENSMUST00000167671 Defb1P56386 69 aa10.06□□□□□ -0.8
Ckap4-202ENSMUST00000167671 Ly6g6cQ9Z1Q4 126 aa10.06□□□□□ -0.8
Ckap4-202ENSMUST00000167671 Stard9Q80TF6 4561 aa10.06□□□□□ -0.8
Ckap4-202ENSMUST00000167671 Q8BGJ3 129 aa10.03□□□□□ -0.8
Ckap4-202ENSMUST00000167671 Vps13dB1ART2 4390 aa10□□□□□ -0.81
Ckap4-202ENSMUST00000167671 2310034C09RikQ9D746 214 aa10□□□□□ -0.81
Ckap4-202ENSMUST00000167671 Dnah2P0C6F1 4456 aa9.98□□□□□ -0.81
Ckap4-202ENSMUST00000167671 FcgbpE9Q0B5 2583 aa9.96□□□□□ -0.81
Ckap4-202ENSMUST00000167671 Pkd1O08852 4293 aa9.92□□□□□ -0.82
Ckap4-202ENSMUST00000167671 Lrp1bQ9JI18 4599 aa9.91□□□□□ -0.82
Ckap4-202ENSMUST00000167671 Krtap10-10A0A1W2P7T6 217 aa9.87□□□□□ -0.83
Ckap4-202ENSMUST00000167671 2310079G19RikQ9D6L6 185 aa9.85□□□□□ -0.83
Ckap4-202ENSMUST00000167671 Gm9821Q8K076 103 aa9.83□□□□□ -0.84
Ckap4-202ENSMUST00000167671 ApobE9Q414 4505 aa9.79□□□□□ -0.84
Ckap4-202ENSMUST00000167671 Gm2696A0A1W2P709 240 aa9.77□□□□□ -0.85
Ckap4-202ENSMUST00000167671 OxtP35454 125 aa9.74□□□□□ -0.85
Ckap4-202ENSMUST00000167671 Defb11Q8R2I7 77 aa9.73□□□□□ -0.85
Ckap4-202ENSMUST00000167671 Krtap3-2Q9D638 99 aa9.73□□□□□ -0.85
Ckap4-202ENSMUST00000167671 Krtap3-3Q9D7P0 99 aa9.73□□□□□ -0.85
Ckap4-202ENSMUST00000167671 Pkhd1E9PZ36 4059 aa9.71□□□□□ -0.85
Ckap4-202ENSMUST00000167671 4930507D05RikQ8C9C9 103 aa9.71□□□□□ -0.86
Ckap4-202ENSMUST00000167671 Gm4491E0CX42 125 aa9.67□□□□□ -0.86
Ckap4-202ENSMUST00000167671 D6Ertd527eA0A0N4SWI3 464 aa9.66□□□□□ -0.86
Ckap4-202ENSMUST00000167671 A930033H14RikG5E8X6 103 aa9.64□□□□□ -0.87
Ckap4-202ENSMUST00000167671 RetnlbQ99P86 105 aa9.57□□□□□ -0.88
Ckap4-202ENSMUST00000167671 SacsQ9JLC8 4582 aa9.51□□□□□ -0.89
Ckap4-202ENSMUST00000167671 Fat2Q5F226 4351 aa9.51□□□□□ -0.89
Ckap4-202ENSMUST00000167671 Pla2g10Q9QXX3 151 aa9.48□□□□□ -0.89
Ckap4-202ENSMUST00000167671 Gm11939A2A592 99 aa9.45□□□□□ -0.9
Ckap4-202ENSMUST00000167671 Fat1A0A1L1SQU7 4645 aa9.44□□□□□ -0.9
Ckap4-202ENSMUST00000167671 Gm3880A0A1B0GSB3 72 aa9.44□□□□□ -0.9
Ckap4-202ENSMUST00000167671 Gm20537G3UYK7 97 aa9.41□□□□□ -0.9
Ckap4-202ENSMUST00000167671 Vps13bQ80TY5 3993 aa9.37□□□□□ -0.91
Ckap4-202ENSMUST00000167671 Cox6b2Q80ZN9 88 aa9.35□□□□□ -0.91
Ckap4-202ENSMUST00000167671 Rps29P62274 56 aa9.32□□□□□ -0.92
Ckap4-202ENSMUST00000167671 Dync1h1Q9JHU4 4644 aaKnown RBP9.31□□□□□ -0.92
Ckap4-202ENSMUST00000167671 Gm12216A0A1W2P827 62 aa9.31□□□□□ -0.92
Ckap4-202ENSMUST00000167671 Pkhd1l1Q80ZA4 4249 aa9.24□□□□□ -0.93
Ckap4-202ENSMUST00000167671 Lrp1Q91ZX7 4545 aaKnown RBP9.24□□□□□ -0.93
Ckap4-202ENSMUST00000167671 CriptO70333 101 aa9.21□□□□□ -0.94
Ckap4-202ENSMUST00000167671 Ryr3A2AGL3 4863 aa9.21□□□□□ -0.94
Ckap4-202ENSMUST00000167671 Gm5767A0A0J9YTU8 78 aa9.15□□□□□ -0.95
Ckap4-202ENSMUST00000167671 Gm10382Q3V0T5 144 aa9.15□□□□□ -0.95
Ckap4-202ENSMUST00000167671 Gm9955Q8CEJ8 102 aa9.1□□□□□ -0.95
Ckap4-202ENSMUST00000167671 Gm9736A0A1W2P7N1 277 aa9.07□□□□□ -0.96
Ckap4-202ENSMUST00000167671 Gm17606F6ZL36 78 aa9.06□□□□□ -0.96
Ckap4-202ENSMUST00000167671 Krtap15-1Q9QZU5 150 aa9.02□□□□□ -0.96
Ckap4-202ENSMUST00000167671 Rnase13Q5GAM7 153 aa9.01□□□□□ -0.97
Ckap4-202ENSMUST00000167671 Gm5965D3Z724 196 aa8.96□□□□□ -0.97
Ckap4-202ENSMUST00000167671 Fat3Q8BNA6 4555 aa8.94□□□□□ -0.98
Ckap4-202ENSMUST00000167671 Mycbp2Q7TPH6 4711 aa8.93□□□□□ -0.98
Ckap4-202ENSMUST00000167671 Kmt2cQ8BRH4 4903 aa8.92□□□□□ -0.98
Ckap4-202ENSMUST00000167671 Krtap19-5O08632 62 aa8.89□□□□□ -0.99
Ckap4-202ENSMUST00000167671 Romo1P60603 79 aa8.89□□□□□ -0.99
Ckap4-202ENSMUST00000167671 Rpl37Q9D823 97 aa8.89□□□□□ -0.99
Ckap4-202ENSMUST00000167671 Mp68P56379 58 aa8.8□□□□□ -1
Ckap4-202ENSMUST00000167671 Krtap3-1A2A591 98 aa8.77□□□□□ -1.01
Ckap4-202ENSMUST00000167671 Abca13Q5SSE9 5034 aa8.76□□□□□ -1.01
Ckap4-202ENSMUST00000167671 Gm20538F6Z9R1 75 aa8.71□□□□□ -1.01
Ckap4-202ENSMUST00000167671 Dnah8Q91XQ0 4731 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 71 ms