RNA–Protein interactions for RNA: ENSMUST00000111390.7

Scarb1-202, Transcript of Scavenger receptor class B member 1, mousemouse

TSL 1 (best) BASIC

Gene Scarb1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1-202ENSMUST00000111390 Phxr4P15974 95 aa12.95□□□□□ -0.34
Scarb1-202ENSMUST00000111390 Reg3aO09037 175 aa12.95□□□□□ -0.34
Scarb1-202ENSMUST00000111390 Vps13dB1ART2 4390 aa12.95□□□□□ -0.34
Scarb1-202ENSMUST00000111390 Igkv3-7A0A0G2JE31 119 aa12.93□□□□□ -0.34
Scarb1-202ENSMUST00000111390 1700074P13RikQ9D9G7 251 aa12.93□□□□□ -0.34
Scarb1-202ENSMUST00000111390 Igkv3-5A0A140T8M6 119 aa12.93□□□□□ -0.34
Scarb1-202ENSMUST00000111390 Odf3bQ5M8M2 238 aa12.92□□□□□ -0.34
Scarb1-202ENSMUST00000111390 Chchd10Q7TNL9 138 aa12.89□□□□□ -0.35
Scarb1-202ENSMUST00000111390 Gm28230A0A0A0MQ91 144 aa12.87□□□□□ -0.35
Scarb1-202ENSMUST00000111390 Sec61gP60060 68 aa12.86□□□□□ -0.35
Scarb1-202ENSMUST00000111390 Dnah2P0C6F1 4456 aa12.83□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Tnp2P11378 117 aa12.83□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Gm20604F8WIA3 75 aa12.81□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Rpl37aP61514 92 aa12.81□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Krtap14O08640 167 aa12.8□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Krtap13O88375 197 aa12.8□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Chtf8P0CG14 533 aa12.79□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Gm2310J3QNJ2 377 aa12.78□□□□□ -0.36
Scarb1-202ENSMUST00000111390 Ccdc179J3QM76 67 aa12.76□□□□□ -0.37
Scarb1-202ENSMUST00000111390 Znf706Q9D115 76 aaKnown RBP12.75□□□□□ -0.37
Scarb1-202ENSMUST00000111390 Krtap10-10A0A1W2P7T6 217 aa12.74□□□□□ -0.37
Scarb1-202ENSMUST00000111390 Defb39Q70KL3 74 aa12.74□□□□□ -0.37
Scarb1-202ENSMUST00000111390 Gm2696A0A1W2P709 240 aa12.73□□□□□ -0.37
Scarb1-202ENSMUST00000111390 Pkd1O08852 4293 aa12.71□□□□□ -0.38
Scarb1-202ENSMUST00000111390 Anapc11Q9CPX9 84 aa12.71□□□□□ -0.38
Scarb1-202ENSMUST00000111390 Cypt14J3QPF7 87 aa12.66□□□□□ -0.38
Scarb1-202ENSMUST00000111390 ApobE9Q414 4505 aa12.65□□□□□ -0.38
Scarb1-202ENSMUST00000111390 Gm10267M0QWD8 85 aa12.64□□□□□ -0.39
Scarb1-202ENSMUST00000111390 Gm10160F6Y577 67 aa12.64□□□□□ -0.39
Scarb1-202ENSMUST00000111390 Gm10643Q3URG9 111 aa12.63□□□□□ -0.39
Scarb1-202ENSMUST00000111390 Stard9Q80TF6 4561 aa12.58□□□□□ -0.39
Scarb1-202ENSMUST00000111390 Hectd4E9Q2E4 4418 aa12.56□□□□□ -0.4
Scarb1-202ENSMUST00000111390 Wfdc3Q14AE4 130 aa12.55□□□□□ -0.4
Scarb1-202ENSMUST00000111390 Dync1h1Q9JHU4 4644 aaKnown RBP12.54□□□□□ -0.4
Scarb1-202ENSMUST00000111390 Ryr3A2AGL3 4863 aa12.53□□□□□ -0.4
Scarb1-202ENSMUST00000111390 Gm20661K7N787 53 aa12.52□□□□□ -0.4
Scarb1-202ENSMUST00000111390 Lrp1bQ9JI18 4599 aa12.52□□□□□ -0.41
Scarb1-202ENSMUST00000111390 1700042G07RikB1AUF7 90 aa12.51□□□□□ -0.41
Scarb1-202ENSMUST00000111390 SptssbQ925E8 76 aa12.51□□□□□ -0.41
Scarb1-202ENSMUST00000111390 Fat1A0A1L1SQU7 4645 aa12.51□□□□□ -0.41
Scarb1-202ENSMUST00000111390 9230102O04RikA2ASX7 82 aa12.5□□□□□ -0.41
Scarb1-202ENSMUST00000111390 Gm26620Q9CY65 116 aa12.5□□□□□ -0.41
Scarb1-202ENSMUST00000111390 Ndufb1P0DN34 57 aa12.49□□□□□ -0.41
Scarb1-202ENSMUST00000111390 Gm16253D3Z167 63 aa12.47□□□□□ -0.41
Scarb1-202ENSMUST00000111390 Igkv3-3A0A140T8Q0 119 aa12.47□□□□□ -0.41
Scarb1-202ENSMUST00000111390 Gm3646F6S692 53 aa12.47□□□□□ -0.41
Scarb1-202ENSMUST00000111390 Pkhd1E9PZ36 4059 aa12.41□□□□□ -0.42
Scarb1-202ENSMUST00000111390 Defb38Q7TNV7 63 aa12.41□□□□□ -0.42
Scarb1-202ENSMUST00000111390 Spaca4Q80ZQ0 127 aa12.33□□□□□ -0.44
Scarb1-202ENSMUST00000111390 Limd2Q8BGB5 128 aa12.3□□□□□ -0.44
Scarb1-202ENSMUST00000111390 Ryr2E9Q401 4966 aaKnown RBP12.28□□□□□ -0.44
Scarb1-202ENSMUST00000111390 RetnlbQ99P86 105 aa12.25□□□□□ -0.45
Scarb1-202ENSMUST00000111390 Uqcr11Q9CPX8 56 aa12.25□□□□□ -0.45
Scarb1-202ENSMUST00000111390 Fat2Q5F226 4351 aa12.23□□□□□ -0.45
Scarb1-202ENSMUST00000111390 Gm21798J3QNU5 87 aa12.2□□□□□ -0.46
Scarb1-202ENSMUST00000111390 Cypt15B1AXS0 87 aa12.16□□□□□ -0.46
Scarb1-202ENSMUST00000111390 SacsQ9JLC8 4582 aa12.16□□□□□ -0.46
Scarb1-202ENSMUST00000111390 Defb13Q8R2I4 64 aa12.06□□□□□ -0.48
Scarb1-202ENSMUST00000111390 Ndufs5Q99LY9 106 aa12.01□□□□□ -0.49
Scarb1-202ENSMUST00000111390 Kmt2cQ8BRH4 4903 aa11.98□□□□□ -0.49
Scarb1-202ENSMUST00000111390 Ryr1E9PZQ0 5035 aa11.96□□□□□ -0.49
Scarb1-202ENSMUST00000111390 Vps13bQ80TY5 3993 aa11.96□□□□□ -0.5
Scarb1-202ENSMUST00000111390 Pkhd1l1Q80ZA4 4249 aa11.94□□□□□ -0.5
Scarb1-202ENSMUST00000111390 Gm9821Q8K076 103 aa11.91□□□□□ -0.5
Scarb1-202ENSMUST00000111390 Rps29P62274 56 aa11.9□□□□□ -0.51
Scarb1-202ENSMUST00000111390 Lrp1Q91ZX7 4545 aaKnown RBP11.89□□□□□ -0.51
Scarb1-202ENSMUST00000111390 Krtap19-5O08632 62 aa11.89□□□□□ -0.51
Scarb1-202ENSMUST00000111390 Gm10999F6Q4M4 69 aa11.83□□□□□ -0.52
Scarb1-202ENSMUST00000111390 Dnah8Q91XQ0 4731 aa11.78□□□□□ -0.52
Scarb1-202ENSMUST00000111390 Fat3Q8BNA6 4555 aa11.76□□□□□ -0.53
Scarb1-202ENSMUST00000111390 2310034C09RikQ9D746 214 aa11.76□□□□□ -0.53
Scarb1-202ENSMUST00000111390 Q8BGJ3 129 aa11.75□□□□□ -0.53
Scarb1-202ENSMUST00000111390 2310079G19RikQ9D6L6 185 aa11.71□□□□□ -0.54
Scarb1-202ENSMUST00000111390 Gm11939A2A592 99 aa11.69□□□□□ -0.54
Scarb1-202ENSMUST00000111390 Pla2g10Q9QXX3 151 aa11.66□□□□□ -0.54
Scarb1-202ENSMUST00000111390 Abca13Q5SSE9 5034 aa11.65□□□□□ -0.54
Scarb1-202ENSMUST00000111390 Defb1P56386 69 aa11.62□□□□□ -0.55
Scarb1-202ENSMUST00000111390 Krtap3-2Q9D638 99 aa11.62□□□□□ -0.55
Scarb1-202ENSMUST00000111390 Krtap3-3Q9D7P0 99 aa11.62□□□□□ -0.55
Scarb1-202ENSMUST00000111390 Gm9736A0A1W2P7N1 277 aa11.57□□□□□ -0.56
Scarb1-202ENSMUST00000111390 D6Ertd527eA0A0N4SWI3 464 aa11.57□□□□□ -0.56
Scarb1-202ENSMUST00000111390 A930033H14RikG5E8X6 103 aa11.52□□□□□ -0.57
Scarb1-202ENSMUST00000111390 4930507D05RikQ8C9C9 103 aa11.52□□□□□ -0.57
Scarb1-202ENSMUST00000111390 Mycbp2Q7TPH6 4711 aa11.51□□□□□ -0.57
Scarb1-202ENSMUST00000111390 Gm5767A0A0J9YTU8 78 aa11.47□□□□□ -0.57
Scarb1-202ENSMUST00000111390 Herc2Q4U2R1 4836 aa11.45□□□□□ -0.58
Scarb1-202ENSMUST00000111390 Gm4491E0CX42 125 aa11.42□□□□□ -0.58
Scarb1-202ENSMUST00000111390 Gm12216A0A1W2P827 62 aa11.4□□□□□ -0.58
Scarb1-202ENSMUST00000111390 Dnhd1D3Z2X2 4750 aa11.38□□□□□ -0.59
Scarb1-202ENSMUST00000111390 Gm5965D3Z724 196 aa11.38□□□□□ -0.59
Scarb1-202ENSMUST00000111390 Kiaa1109A2AAE1 5005 aa11.37□□□□□ -0.59
Scarb1-202ENSMUST00000111390 Birc6O88738 4882 aa11.35□□□□□ -0.59
Scarb1-202ENSMUST00000111390 Krtap15-1Q9QZU5 150 aa11.22□□□□□ -0.61
Scarb1-202ENSMUST00000111390 HydinQ80W93 5154 aa11.21□□□□□ -0.62
Scarb1-202ENSMUST00000111390 Gm20537G3UYK7 97 aa11.2□□□□□ -0.62
Scarb1-202ENSMUST00000111390 Rpl37Q9D823 97 aa11.15□□□□□ -0.62
Scarb1-202ENSMUST00000111390 Gm3880A0A1B0GSB3 72 aa11.12□□□□□ -0.63
Scarb1-202ENSMUST00000111390 Rnase13Q5GAM7 153 aa11.1□□□□□ -0.63
Scarb1-202ENSMUST00000111390 Cox6b2Q80ZN9 88 aa11.1□□□□□ -0.63
Scarb1-202ENSMUST00000111390 Lrp2A2ARV4 4660 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms