RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Gm6217A0A1Y7VJK9 128 aa4.54□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Gm12353A2AGJ4 60 aa4.54□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Defa21Q8C1P2 93 aa4.54□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Gm37013Q8K491 104 aa4.54□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 4930535I16RikQ9CUI2 172 aa4.54□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Dnah11E9Q7N9 4488 aa4.53□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Cox6a2P43023 97 aa4.52□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Defa23Q5G866 93 aa4.52□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Gm16485Q8C4B7 115 aa4.52□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 MplkipQ9D011 178 aa4.52□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 A0A286YCN5 57 aa4.51□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Krtap4-9B1AQA9 244 aa4.51□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Gm20726G3UX18 150 aa4.51□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 P06320 134 aa4.51□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 UqcrqQ9CQ69 82 aa4.51□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 H2al1bA0A087WP11 105 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Igkv3-12A0A140T8P0 119 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Gm17689B3GLJ4 109 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Obox2E9PXV9 151 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 H2al1kJ3QP08 105 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 H2al1eQ810S6 105 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Mrpl55Q9CZ83 127 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Naa38Q9D2U5 125 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 H2al1mQ9DAD9 105 aa4.5□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Gm7735D3YX18 52 aa4.49□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Prm1P02319 51 aa4.49□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Defb37Q7TMD2 62 aa4.49□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 B230307C23RikQ8BLB2 64 aa4.49□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Serp1Q9Z1W5 66 aa4.49□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Ush2AQ2QI47 5193 aa4.48□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Lrp2A2ARV4 4660 aa4.48□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Defa20Q45VN2 95 aa4.48□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Fam19a3Q7TPG6 132 aa4.48□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Fam229bQ8CF36 80 aa4.48□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 2310034C09RikQ9D746 214 aa4.48□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Pkhd1l1Q80ZA4 4249 aa4.48□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Igkv1-122A0A140T8M9 119 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Igkv3-4A0A140T8Q4 119 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Krtap1-3A2A588 173 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Gm10401E9Q3K6 71 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 U90926O08546 118 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 BikO70337 150 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Vpreb1P13372 142 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Defa4P28311 92 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Smim29Q8R043 75 aa4.47□□□□□ -1.69
Ccdc47-202ENSMUST00000106865 Vpreb3D3Z6J4 130 aa4.46□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 A330070K13RikQ8CA53 115 aa4.46□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 2310061N02RikQ9D6S9 174 aa4.46□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Igkv3-2A0A075B5P0 119 aa4.45□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 A0A286YE02 88 aa4.45□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Pet100P0DJE0 76 aa4.45□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Q8BT88 171 aa4.45□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 C130032M10RikQ8C888 123 aa4.45□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Fam19a5Q91WE9 132 aa4.45□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Mrpl34Q99N91 92 aa4.45□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Gm2431E9Q8S1 172 aa4.44□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Gm10837Q3UTT8 145 aa4.44□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Chchd10Q7TNL9 138 aa4.44□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Gm11567Q9D141 195 aa4.44□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Zcchc13Q9D548 170 aa4.44□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 ApobE9Q414 4505 aa4.44□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Fat3Q8BNA6 4555 aa4.43□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Igkv8-19A0A0G2JFN8 121 aa4.42□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 AI606181Q8C7B9 129 aa4.42□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Hmcn2A2AJ76 5100 aa4.42□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Igkv3-10A0A0G2JGN0 119 aa4.41□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Gm17521F6QAC8 156 aa4.41□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Gm10139O88245 57 aa4.41□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 PscaP57096 123 aa4.41□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Fam168bQ80XQ8 194 aa4.41□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Q8K1L6 76 aa4.41□□□□□ -1.7
Ccdc47-202ENSMUST00000106865 Ube2bP63147 152 aa4.4□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Coa6Q8BGD8 79 aa4.4□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Prr15lQ8JZM2 100 aa4.4□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Gm44790A0A0N4SV91 103 aa4.39□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Dph3Q8K0W9 82 aa4.39□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 SycnQ8VCK7 134 aa4.39□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 SnurfQ9WU12 71 aa4.39□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Lrp1Q91ZX7 4545 aaKnown RBP4.39□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Gm9789Q8BIG3 52 aa4.38□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Brk1Q91VR8 75 aa4.38□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Defa27F2Z403 93 aa4.37□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Krtap13O88375 197 aa4.37□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Defb40Q70KL2 73 aa4.37□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Cdc42se1Q8BHL7 80 aa4.37□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Spint4Q9D263 159 aa4.37□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Gm21886J3QJU9 214 aa4.36□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Rpl37aP61514 92 aa4.36□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Odf3bQ5M8M2 238 aa4.36□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Lrp1bQ9JI18 4599 aa4.35□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Atox1O08997 68 aaKnown RBP4.35□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Spink8Q09TK9 105 aa4.35□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 1700018G05RikA0A1B0GSI2 66 aa4.34□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Gm10065F6TJM2 114 aa4.34□□□□□ -1.71
Ccdc47-202ENSMUST00000106865 Gm28230A0A0A0MQ91 144 aa4.33□□□□□ -1.72
Ccdc47-202ENSMUST00000106865 A0A286YE49 62 aa4.33□□□□□ -1.72
Ccdc47-202ENSMUST00000106865 Ube2aQ9Z255 152 aa4.33□□□□□ -1.72
Ccdc47-202ENSMUST00000106865 Krtap19-5O08632 62 aa4.32□□□□□ -1.72
Ccdc47-202ENSMUST00000106865 Gm10160F6Y577 67 aa4.31□□□□□ -1.72
Ccdc47-202ENSMUST00000106865 Plac8Q9JI48 112 aa4.31□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 114 ms