RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Chic1Q8CBW7 227 aa24.99■■□□□ 1.59
Ccdc47-202ENSMUST00000106865 Mapk8ip2Q9ERE9 830 aa23.93■■□□□ 1.42
Ccdc47-202ENSMUST00000106865 Phf23Q8BSN5 401 aa22.55■■□□□ 1.2
Ccdc47-202ENSMUST00000106865 Plppr3Q7TPB0 716 aa22.03■■□□□ 1.12
Ccdc47-202ENSMUST00000106865 Gab3Q8BSM5 595 aa21.65■■□□□ 1.06
Ccdc47-202ENSMUST00000106865 Senp3Q9EP97 568 aaKnown RBP20.8■□□□□ 0.92
Ccdc47-202ENSMUST00000106865 Kcna4Q61423 654 aa20.44■□□□□ 0.86
Ccdc47-202ENSMUST00000106865 Trap1aP19473 224 aa18.32■□□□□ 0.52
Ccdc47-202ENSMUST00000106865 Dmrt2Q8BG36 561 aa18.27■□□□□ 0.52
Ccdc47-202ENSMUST00000106865 Ppargc1bQ8VHJ7 1014 aa18.24■□□□□ 0.51
Ccdc47-202ENSMUST00000106865 Hoxd11P23813 323 aa18.21■□□□□ 0.51
Ccdc47-202ENSMUST00000106865 Slc4a1apE9PX68 744 aa17.65■□□□□ 0.42
Ccdc47-202ENSMUST00000106865 Fam163aQ8CAA5 168 aa17.54■□□□□ 0.4
Ccdc47-202ENSMUST00000106865 Znf219Q6IQX8 726 aa17.39■□□□□ 0.37
Ccdc47-202ENSMUST00000106865 Chrna2Q91X60 512 aa17.3■□□□□ 0.36
Ccdc47-202ENSMUST00000106865 Atf5O70191 283 aa17.25■□□□□ 0.35
Ccdc47-202ENSMUST00000106865 Dnajc5bQ9CQ94 199 aa17.14■□□□□ 0.33
Ccdc47-202ENSMUST00000106865 Rsph4aQ8BYM7 716 aa17.1■□□□□ 0.33
Ccdc47-202ENSMUST00000106865 Hs6st3Q9QYK4 470 aa16.99■□□□□ 0.31
Ccdc47-202ENSMUST00000106865 Ppp4r2Q0VGB7 417 aa16.98■□□□□ 0.31
Ccdc47-202ENSMUST00000106865 Rimbp2Q80U40 1072 aa16.91■□□□□ 0.3
Ccdc47-202ENSMUST00000106865 Ube2uB1AUC4 352 aa16.87■□□□□ 0.29
Ccdc47-202ENSMUST00000106865 1700123L14RikQ3V2K7 440 aa16.7■□□□□ 0.26
Ccdc47-202ENSMUST00000106865 Fam71e1A1L3C1 212 aa16.54■□□□□ 0.24
Ccdc47-202ENSMUST00000106865 Akt1s1Q9D1F4 257 aa16.41■□□□□ 0.22
Ccdc47-202ENSMUST00000106865 ArsiQ32KI9 573 aa16.28■□□□□ 0.2
Ccdc47-202ENSMUST00000106865 Bach1P97302 739 aa16.27■□□□□ 0.2
Ccdc47-202ENSMUST00000106865 Slc34a2Q9DBP0 697 aa16.22■□□□□ 0.19
Ccdc47-202ENSMUST00000106865 Nlrp6Q91WS2 869 aa16.19■□□□□ 0.18
Ccdc47-202ENSMUST00000106865 Cdca7Q9D0M2 382 aa16.13■□□□□ 0.17
Ccdc47-202ENSMUST00000106865 AcrbpQ3V140 540 aa16.02■□□□□ 0.16
Ccdc47-202ENSMUST00000106865 Pde4cQ3UEI1 686 aa15.98■□□□□ 0.15
Ccdc47-202ENSMUST00000106865 Sox12Q04890 314 aa15.96■□□□□ 0.15
Ccdc47-202ENSMUST00000106865 C1qtnf12Q8R2Z0 308 aa15.88■□□□□ 0.13
Ccdc47-202ENSMUST00000106865 WdpcpQ8C456 722 aa15.85■□□□□ 0.13
Ccdc47-202ENSMUST00000106865 Gm35339A0A140LHH9 1649 aa15.8■□□□□ 0.12
Ccdc47-202ENSMUST00000106865 Rtn4Q99P72 1162 aaKnown RBP15.64■□□□□ 0.09
Ccdc47-202ENSMUST00000106865 Riok3Q9DBU3 519 aaKnown RBP15.64■□□□□ 0.09
Ccdc47-202ENSMUST00000106865 Npm2Q80W85 207 aa15.59■□□□□ 0.09
Ccdc47-202ENSMUST00000106865 Prm3Q62100 101 aa15.57■□□□□ 0.08
Ccdc47-202ENSMUST00000106865 Tshz2Q68FE9 1030 aa15.52■□□□□ 0.08
Ccdc47-202ENSMUST00000106865 MyclP10166 368 aa15.51■□□□□ 0.07
Ccdc47-202ENSMUST00000106865 Ehmt2Q9Z148 1263 aaKnown RBP15.47■□□□□ 0.07
Ccdc47-202ENSMUST00000106865 Ms4a5Q810P8 197 aa15.44■□□□□ 0.06
Ccdc47-202ENSMUST00000106865 Trim41Q5NCC3 630 aa15.34■□□□□ 0.05
Ccdc47-202ENSMUST00000106865 Styxl1Q9DAR2 321 aa15.33■□□□□ 0.04
Ccdc47-202ENSMUST00000106865 G430095P16RikE9Q913 147 aa15.27■□□□□ 0.04
Ccdc47-202ENSMUST00000106865 NischQ80TM9 1593 aa15.22■□□□□ 0.03
Ccdc47-202ENSMUST00000106865 Ifnlr1Q8CGK5 535 aa15.2■□□□□ 0.02
Ccdc47-202ENSMUST00000106865 Abcc9P70170 1546 aa15.14■□□□□ 0.01
Ccdc47-202ENSMUST00000106865 Zbtb7aO88939 569 aaKnown RBP15.1■□□□□ 0.01
Ccdc47-202ENSMUST00000106865 Egfem1Q8C088 590 aa15.07■□□□□ 0
Ccdc47-202ENSMUST00000106865 Zbtb12Q9Z150 459 aa14.94□□□□□ -0.02
Ccdc47-202ENSMUST00000106865 Grwd1Q810D6 446 aaKnown RBP14.93□□□□□ -0.02
Ccdc47-202ENSMUST00000106865 Ecm2Q5FW85 670 aa14.92□□□□□ -0.02
Ccdc47-202ENSMUST00000106865 Abcc8B2RUS7 1588 aa14.9□□□□□ -0.02
Ccdc47-202ENSMUST00000106865 Abcb7Q61102 752 aaKnown RBP14.81□□□□□ -0.04
Ccdc47-202ENSMUST00000106865 Rnf216P58283 853 aa14.8□□□□□ -0.04
Ccdc47-202ENSMUST00000106865 ScribQ80U72 1612 aa14.8□□□□□ -0.04
Ccdc47-202ENSMUST00000106865 Gtpbp6Q3U6U5 514 aa14.79□□□□□ -0.04
Ccdc47-202ENSMUST00000106865 Tcf3P15806 651 aa14.74□□□□□ -0.05
Ccdc47-202ENSMUST00000106865 Fbln2P37889 1221 aa14.73□□□□□ -0.05
Ccdc47-202ENSMUST00000106865 Prdm10Q3UTQ7 1184 aa14.73□□□□□ -0.05
Ccdc47-202ENSMUST00000106865 MpndQ3TV65 487 aa14.7□□□□□ -0.06
Ccdc47-202ENSMUST00000106865 Npm3Q9CPP0 175 aaKnown RBP14.69□□□□□ -0.06
Ccdc47-202ENSMUST00000106865 Znf704Q9ERQ3 566 aa14.67□□□□□ -0.06
Ccdc47-202ENSMUST00000106865 Slc4a5E9Q3M5 1116 aa14.61□□□□□ -0.07
Ccdc47-202ENSMUST00000106865 Nkx1-1G3UXB3 402 aa14.57□□□□□ -0.08
Ccdc47-202ENSMUST00000106865 Ppp1r37Q8BKR5 712 aa14.53□□□□□ -0.08
Ccdc47-202ENSMUST00000106865 Skida1Q80YR3 822 aa14.39□□□□□ -0.11
Ccdc47-202ENSMUST00000106865 Lrrc43Q3V0L5 667 aa14.19□□□□□ -0.14
Ccdc47-202ENSMUST00000106865 NacadQ5SWP3 1504 aa14.12□□□□□ -0.15
Ccdc47-202ENSMUST00000106865 Kdm5dQ62240 1548 aa14.11□□□□□ -0.15
Ccdc47-202ENSMUST00000106865 Jarid2Q62315 1234 aa14.09□□□□□ -0.15
Ccdc47-202ENSMUST00000106865 CatipB9EKE5 520 aa14.08□□□□□ -0.16
Ccdc47-202ENSMUST00000106865 Ppp6r1Q7TSI3 856 aa14.03□□□□□ -0.16
Ccdc47-202ENSMUST00000106865 Pitpnm1O35954 1243 aa13.95□□□□□ -0.18
Ccdc47-202ENSMUST00000106865 Spock2Q9ER58 423 aa13.95□□□□□ -0.18
Ccdc47-202ENSMUST00000106865 MycnP03966 462 aaKnown RBP13.94□□□□□ -0.18
Ccdc47-202ENSMUST00000106865 Sycp2Q9CUU3 1500 aa13.9□□□□□ -0.19
Ccdc47-202ENSMUST00000106865 Trim35Q8C006 501 aa13.86□□□□□ -0.19
Ccdc47-202ENSMUST00000106865 BicraF8VPZ9 1578 aa13.86□□□□□ -0.19
Ccdc47-202ENSMUST00000106865 Cadps2Q8BYR5 1297 aa13.85□□□□□ -0.19
Ccdc47-202ENSMUST00000106865 Sra1Q80VJ2 232 aa13.82□□□□□ -0.2
Ccdc47-202ENSMUST00000106865 Zbtb22Q9Z0G7 638 aa13.77□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Fam117bQ3U3E2 584 aa13.76□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Repin1Q5U4E2 545 aa13.76□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Nyap1Q6PFX7 833 aa13.75□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Prdm16A2A935 1275 aa13.73□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Hnrnpul2Q00PI9 745 aaKnown RBP13.73□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Ferd3lQ923Z4 168 aa13.73□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Pde4dQ01063 747 aa13.72□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Hdac5Q9Z2V6 1113 aa13.71□□□□□ -0.21
Ccdc47-202ENSMUST00000106865 Thoc2B1AZI6 1594 aaKnown RBP13.71□□□□□ -0.22
Ccdc47-202ENSMUST00000106865 Kcnn1Q9EQR3 537 aa13.69□□□□□ -0.22
Ccdc47-202ENSMUST00000106865 Dcaf1Q80TR8 1506 aa13.66□□□□□ -0.22
Ccdc47-202ENSMUST00000106865 Slc4a2P13808 1237 aaKnown RBP13.64□□□□□ -0.23
Ccdc47-202ENSMUST00000106865 TimelessQ9R1X4 1197 aa13.64□□□□□ -0.23
Ccdc47-202ENSMUST00000106865 Kank3Q9Z1P7 791 aa13.64□□□□□ -0.23
Ccdc47-202ENSMUST00000106865 Prr29B1ARI9 187 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 65.8 ms