RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Gnb1lQ9EQ15 326 aa8.63□□□□□ -1.03
Usf3-201ENSMUST00000088356 P0C913 63 aa8.62□□□□□ -1.03
Usf3-201ENSMUST00000088356 Igkv1-35A0A0G2JDE5 120 aa8.61□□□□□ -1.03
Usf3-201ENSMUST00000088356 Reg3aO09037 175 aa8.61□□□□□ -1.03
Usf3-201ENSMUST00000088356 Gm11027G8JL69 66 aa8.6□□□□□ -1.03
Usf3-201ENSMUST00000088356 Cox6a2P43023 97 aa8.6□□□□□ -1.03
Usf3-201ENSMUST00000088356 Uqcc3Q8K2T4 89 aa8.6□□□□□ -1.03
Usf3-201ENSMUST00000088356 Ccl17F6R5P4 103 aa8.59□□□□□ -1.03
Usf3-201ENSMUST00000088356 Defa21Q8C1P2 93 aa8.58□□□□□ -1.04
Usf3-201ENSMUST00000088356 Smim1P0C8K7 78 aa8.57□□□□□ -1.04
Usf3-201ENSMUST00000088356 Ifitm6A0A1B0GS75 124 aa8.56□□□□□ -1.04
Usf3-201ENSMUST00000088356 Defb45Q3V490 66 aa8.56□□□□□ -1.04
Usf3-201ENSMUST00000088356 Apoc4Q61268 124 aa8.56□□□□□ -1.04
Usf3-201ENSMUST00000088356 1700020N15RikL7MTX3 112 aa8.55□□□□□ -1.04
Usf3-201ENSMUST00000088356 Trav3-4A0A075B654 114 aa8.53□□□□□ -1.04
Usf3-201ENSMUST00000088356 Sfta2E9PXB6 77 aa8.53□□□□□ -1.04
Usf3-201ENSMUST00000088356 Krtap13-1Q8K198 168 aa8.53□□□□□ -1.04
Usf3-201ENSMUST00000088356 Gm28051J3QMA2 81 aa8.52□□□□□ -1.05
Usf3-201ENSMUST00000088356 C130032M10RikQ8C888 123 aa8.52□□□□□ -1.05
Usf3-201ENSMUST00000088356 Gemin7Q9CWY4 129 aa8.51□□□□□ -1.05
Usf3-201ENSMUST00000088356 Vps25Q9CQ80 176 aa8.5□□□□□ -1.05
Usf3-201ENSMUST00000088356 A0A286YCQ8 80 aa8.49□□□□□ -1.05
Usf3-201ENSMUST00000088356 Rab37Q9JKM7 223 aa8.49□□□□□ -1.05
Usf3-201ENSMUST00000088356 9530003J23RikQ8BM26 151 aa8.48□□□□□ -1.05
Usf3-201ENSMUST00000088356 Gm16381A0A1Y7VKT9 73 aa8.47□□□□□ -1.05
Usf3-201ENSMUST00000088356 Mt4P47945 62 aa8.47□□□□□ -1.05
Usf3-201ENSMUST00000088356 Tmem213Q08EA8 116 aa8.46□□□□□ -1.06
Usf3-201ENSMUST00000088356 Tal2Q62282 108 aa8.45□□□□□ -1.06
Usf3-201ENSMUST00000088356 Gm12353A2AGJ4 60 aa8.43□□□□□ -1.06
Usf3-201ENSMUST00000088356 Vamp8O70404 101 aa8.43□□□□□ -1.06
Usf3-201ENSMUST00000088356 G0s2Q61585 103 aa8.43□□□□□ -1.06
Usf3-201ENSMUST00000088356 Krtap6-3A0A087WQL6 57 aa8.42□□□□□ -1.06
Usf3-201ENSMUST00000088356 Smim13E9Q942 88 aa8.42□□□□□ -1.06
Usf3-201ENSMUST00000088356 Q9DAA3 117 aa8.42□□□□□ -1.06
Usf3-201ENSMUST00000088356 Gm17416Q30KP4 66 aa8.41□□□□□ -1.06
Usf3-201ENSMUST00000088356 Prm2P07978 107 aa8.4□□□□□ -1.06
Usf3-201ENSMUST00000088356 Krtap4-13Q9D7P3 165 aa8.39□□□□□ -1.07
Usf3-201ENSMUST00000088356 Tax1bp3Q9DBG9 124 aa8.38□□□□□ -1.07
Usf3-201ENSMUST00000088356 Gm6358A0A087WPH4 74 aa8.37□□□□□ -1.07
Usf3-201ENSMUST00000088356 Krtap1-5A2A590 122 aa8.36□□□□□ -1.07
Usf3-201ENSMUST00000088356 Gm44790A0A0N4SV91 103 aa8.34□□□□□ -1.07
Usf3-201ENSMUST00000088356 Scgb1b2O35176 93 aa8.34□□□□□ -1.07
Usf3-201ENSMUST00000088356 CckP09240 115 aa8.34□□□□□ -1.07
Usf3-201ENSMUST00000088356 Ube2v1Q9CZY3 147 aa8.34□□□□□ -1.07
Usf3-201ENSMUST00000088356 Gm28539A0A087WSL9 92 aa8.33□□□□□ -1.08
Usf3-201ENSMUST00000088356 Gm10267M0QWD8 85 aa8.31□□□□□ -1.08
Usf3-201ENSMUST00000088356 Cox7cP17665 63 aa8.29□□□□□ -1.08
Usf3-201ENSMUST00000088356 P01843 105 aa8.27□□□□□ -1.09
Usf3-201ENSMUST00000088356 Krtap12-1Q9Z287 130 aa8.27□□□□□ -1.09
Usf3-201ENSMUST00000088356 BikO70337 150 aa8.26□□□□□ -1.09
Usf3-201ENSMUST00000088356 Defb13Q8R2I4 64 aa8.26□□□□□ -1.09
Usf3-201ENSMUST00000088356 Tac4Q99N14 128 aa8.26□□□□□ -1.09
Usf3-201ENSMUST00000088356 4930524J08RikQ9CUJ5 163 aa8.25□□□□□ -1.09
Usf3-201ENSMUST00000088356 Krtap3-2Q9D638 99 aa8.25□□□□□ -1.09
Usf3-201ENSMUST00000088356 Krtap3-3Q9D7P0 99 aa8.25□□□□□ -1.09
Usf3-201ENSMUST00000088356 Bud31Q6PGH1 103 aa8.24□□□□□ -1.09
Usf3-201ENSMUST00000088356 Pla2g10Q9QXX3 151 aa8.24□□□□□ -1.09
Usf3-201ENSMUST00000088356 Trav14d-3-dv8A0A075B619 120 aa8.23□□□□□ -1.09
Usf3-201ENSMUST00000088356 BtcQ05928 177 aa8.23□□□□□ -1.09
Usf3-201ENSMUST00000088356 Defb47Q30KN1 79 aa8.23□□□□□ -1.09
Usf3-201ENSMUST00000088356 Gm29423A0A087WRM1 55 aa8.21□□□□□ -1.1
Usf3-201ENSMUST00000088356 Sprr2jO70561 109 aa8.19□□□□□ -1.1
Usf3-201ENSMUST00000088356 UqcrqQ9CQ69 82 aa8.18□□□□□ -1.1
Usf3-201ENSMUST00000088356 Gm20604F8WIA3 75 aa8.15□□□□□ -1.1
Usf3-201ENSMUST00000088356 Gm26602M0QWA4 95 aa8.15□□□□□ -1.1
Usf3-201ENSMUST00000088356 2310079G19RikQ9D6L6 185 aa8.15□□□□□ -1.1
Usf3-201ENSMUST00000088356 Igkv8-27A0A0G2JF28 120 aa8.14□□□□□ -1.11
Usf3-201ENSMUST00000088356 Gm4491E0CX42 125 aa8.12□□□□□ -1.11
Usf3-201ENSMUST00000088356 Mrpl34Q99N91 92 aa8.11□□□□□ -1.11
Usf3-201ENSMUST00000088356 Sprr2kO70562 68 aa8.1□□□□□ -1.11
Usf3-201ENSMUST00000088356 Mtatp8P03930 67 aa8.1□□□□□ -1.11
Usf3-201ENSMUST00000088356 NrepQ07475 68 aa8.1□□□□□ -1.11
Usf3-201ENSMUST00000088356 CenpwQ3URR0 86 aa8.1□□□□□ -1.11
Usf3-201ENSMUST00000088356 Lce1lQ9D1G7 135 aa8.1□□□□□ -1.11
Usf3-201ENSMUST00000088356 Krtap9-3Q3V2C1 136 aa8.09□□□□□ -1.11
Usf3-201ENSMUST00000088356 MturnQ8CGA4 131 aa8.09□□□□□ -1.11
Usf3-201ENSMUST00000088356 2210017I01RikA0A0A6YVV1 95 aa8.07□□□□□ -1.12
Usf3-201ENSMUST00000088356 Cox6cQ9CPQ1 76 aa8.05□□□□□ -1.12
Usf3-201ENSMUST00000088356 Cby1Q9D1C2 127 aa8.05□□□□□ -1.12
Usf3-201ENSMUST00000088356 Spink13Q3UTS8 97 aa8.04□□□□□ -1.12
Usf3-201ENSMUST00000088356 Gm26920S4R2A5 56 aa8.03□□□□□ -1.12
Usf3-201ENSMUST00000088356 Rbm3O89086 153 aaKnown RBP8.02□□□□□ -1.13
Usf3-201ENSMUST00000088356 Gm37013Q8K491 104 aa8.02□□□□□ -1.13
Usf3-201ENSMUST00000088356 Gm19426M0QWC7 77 aa8□□□□□ -1.13
Usf3-201ENSMUST00000088356 Pxt1Q8K459 51 aa7.98□□□□□ -1.13
Usf3-201ENSMUST00000088356 Lce1bQ9D149 137 aa7.98□□□□□ -1.13
Usf3-201ENSMUST00000088356 Gm10135F6TEE5 83 aa7.95□□□□□ -1.14
Usf3-201ENSMUST00000088356 Gtf2h5Q8K2X8 71 aa7.94□□□□□ -1.14
Usf3-201ENSMUST00000088356 2300003K06RikA2A4M0 262 aa7.93□□□□□ -1.14
Usf3-201ENSMUST00000088356 Krtap19-9aF8WH65 55 aa7.93□□□□□ -1.14
Usf3-201ENSMUST00000088356 Acyp1P56376 99 aa7.92□□□□□ -1.14
Usf3-201ENSMUST00000088356 Lyrm7Q9DA03 104 aa7.92□□□□□ -1.14
Usf3-201ENSMUST00000088356 Gm38119A0A0A6YX29 146 aa7.89□□□□□ -1.15
Usf3-201ENSMUST00000088356 Gm45213A0A0U1RNZ6 101 aa7.89□□□□□ -1.15
Usf3-201ENSMUST00000088356 Krtap4-7Q9D732 168 aa7.88□□□□□ -1.15
Usf3-201ENSMUST00000088356 Defb38Q7TNV7 63 aa7.86□□□□□ -1.15
Usf3-201ENSMUST00000088356 Fam240bJ3QMB3 78 aa7.85□□□□□ -1.15
Usf3-201ENSMUST00000088356 BatfO35284 125 aa7.84□□□□□ -1.15
Usf3-201ENSMUST00000088356 Lce1iQ9D6P5 149 aa7.83□□□□□ -1.16
Usf3-201ENSMUST00000088356 Naa38Q9D2U5 125 aa7.82□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms