RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Rpl37aP61514 92 aa13.57□□□□□ -0.24
Ptx3-201ENSMUST00000029421 6030445D17RikE9Q8F9 148 aa13.56□□□□□ -0.24
Ptx3-201ENSMUST00000029421 Vps13dB1ART2 4390 aa13.53□□□□□ -0.24
Ptx3-201ENSMUST00000029421 1600014C23RikQ9DAX4 101 aa13.49□□□□□ -0.25
Ptx3-201ENSMUST00000029421 Chtf8P0CG14 533 aa13.48□□□□□ -0.25
Ptx3-201ENSMUST00000029421 Gpr15lA0A0B4J1N3 78 aa13.47□□□□□ -0.25
Ptx3-201ENSMUST00000029421 Dnah2P0C6F1 4456 aa13.46□□□□□ -0.26
Ptx3-201ENSMUST00000029421 NbdyA0A0N4SUI7 68 aa13.45□□□□□ -0.26
Ptx3-201ENSMUST00000029421 Znf706Q9D115 76 aaKnown RBP13.44□□□□□ -0.26
Ptx3-201ENSMUST00000029421 Dnah5Q8VHE6 4621 aa13.43□□□□□ -0.26
Ptx3-201ENSMUST00000029421 Gm28374F6SG70 93 aa13.42□□□□□ -0.26
Ptx3-201ENSMUST00000029421 Gm10642Q3TWM1 71 aa13.42□□□□□ -0.26
Ptx3-201ENSMUST00000029421 Adm2Q7TNK8 150 aa13.42□□□□□ -0.26
Ptx3-201ENSMUST00000029421 Gm10160F6Y577 67 aa13.42□□□□□ -0.26
Ptx3-201ENSMUST00000029421 4933415A04RikQ9D443 101 aa13.42□□□□□ -0.26
Ptx3-201ENSMUST00000029421 Igkv3-3A0A140T8Q0 119 aa13.4□□□□□ -0.26
Ptx3-201ENSMUST00000029421 HrnrQ8VHD8 2496 aa13.36□□□□□ -0.27
Ptx3-201ENSMUST00000029421 Gm10267M0QWD8 85 aa13.36□□□□□ -0.27
Ptx3-201ENSMUST00000029421 Cypt14J3QPF7 87 aa13.33□□□□□ -0.27
Ptx3-201ENSMUST00000029421 Krtap13O88375 197 aa13.33□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Tnp2P11378 117 aa13.33□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Pkd1O08852 4293 aa13.31□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Gm2696A0A1W2P709 240 aa13.3□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Gm10643Q3URG9 111 aa13.3□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Krtap14O08640 167 aa13.29□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Krtap10-10A0A1W2P7T6 217 aa13.29□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Gm16253D3Z167 63 aa13.27□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Ccdc179J3QM76 67 aa13.27□□□□□ -0.28
Ptx3-201ENSMUST00000029421 Ndufb1P0DN34 57 aa13.23□□□□□ -0.29
Ptx3-201ENSMUST00000029421 Wfdc3Q14AE4 130 aa13.19□□□□□ -0.3
Ptx3-201ENSMUST00000029421 Defb39Q70KL3 74 aa13.19□□□□□ -0.3
Ptx3-201ENSMUST00000029421 ApobE9Q414 4505 aa13.18□□□□□ -0.3
Ptx3-201ENSMUST00000029421 Gm20661K7N787 53 aa13.15□□□□□ -0.3
Ptx3-201ENSMUST00000029421 Dync1h1Q9JHU4 4644 aaKnown RBP13.14□□□□□ -0.31
Ptx3-201ENSMUST00000029421 Anapc11Q9CPX9 84 aa13.1□□□□□ -0.31
Ptx3-201ENSMUST00000029421 Ryr3A2AGL3 4863 aa13.07□□□□□ -0.32
Ptx3-201ENSMUST00000029421 Limd2Q8BGB5 128 aa13.07□□□□□ -0.32
Ptx3-201ENSMUST00000029421 Hectd4E9Q2E4 4418 aa13.03□□□□□ -0.32
Ptx3-201ENSMUST00000029421 SptssbQ925E8 76 aa13.03□□□□□ -0.32
Ptx3-201ENSMUST00000029421 Fat1A0A1L1SQU7 4645 aa13.03□□□□□ -0.32
Ptx3-201ENSMUST00000029421 Pkhd1E9PZ36 4059 aa13.01□□□□□ -0.33
Ptx3-201ENSMUST00000029421 Uqcr11Q9CPX8 56 aa12.99□□□□□ -0.33
Ptx3-201ENSMUST00000029421 Stard9Q80TF6 4561 aa12.99□□□□□ -0.33
Ptx3-201ENSMUST00000029421 Defb38Q7TNV7 63 aa12.98□□□□□ -0.33
Ptx3-201ENSMUST00000029421 Lrp1bQ9JI18 4599 aa12.96□□□□□ -0.33
Ptx3-201ENSMUST00000029421 Defb13Q8R2I4 64 aa12.95□□□□□ -0.34
Ptx3-201ENSMUST00000029421 Ryr2E9Q401 4966 aaKnown RBP12.95□□□□□ -0.34
Ptx3-201ENSMUST00000029421 Cypt15B1AXS0 87 aa12.93□□□□□ -0.34
Ptx3-201ENSMUST00000029421 Gm21798J3QNU5 87 aa12.9□□□□□ -0.34
Ptx3-201ENSMUST00000029421 Gm3646F6S692 53 aa12.82□□□□□ -0.36
Ptx3-201ENSMUST00000029421 Sec61gP60060 68 aa12.81□□□□□ -0.36
Ptx3-201ENSMUST00000029421 Gm26620Q9CY65 116 aa12.8□□□□□ -0.36
Ptx3-201ENSMUST00000029421 1700042G07RikB1AUF7 90 aa12.76□□□□□ -0.37
Ptx3-201ENSMUST00000029421 Fat2Q5F226 4351 aa12.76□□□□□ -0.37
Ptx3-201ENSMUST00000029421 Spaca4Q80ZQ0 127 aa12.72□□□□□ -0.37
Ptx3-201ENSMUST00000029421 RetnlbQ99P86 105 aa12.72□□□□□ -0.37
Ptx3-201ENSMUST00000029421 SacsQ9JLC8 4582 aa12.67□□□□□ -0.38
Ptx3-201ENSMUST00000029421 Pkhd1l1Q80ZA4 4249 aa12.66□□□□□ -0.38
Ptx3-201ENSMUST00000029421 Gm10999F6Q4M4 69 aa12.62□□□□□ -0.39
Ptx3-201ENSMUST00000029421 Ryr1E9PZQ0 5035 aa12.59□□□□□ -0.39
Ptx3-201ENSMUST00000029421 9230102O04RikA2ASX7 82 aa12.57□□□□□ -0.4
Ptx3-201ENSMUST00000029421 2310034C09RikQ9D746 214 aa12.56□□□□□ -0.4
Ptx3-201ENSMUST00000029421 Vps13bQ80TY5 3993 aa12.56□□□□□ -0.4
Ptx3-201ENSMUST00000029421 Q8BGJ3 129 aa12.54□□□□□ -0.4
Ptx3-201ENSMUST00000029421 Kmt2cQ8BRH4 4903 aa12.5□□□□□ -0.41
Ptx3-201ENSMUST00000029421 2310079G19RikQ9D6L6 185 aa12.49□□□□□ -0.41
Ptx3-201ENSMUST00000029421 4930507D05RikQ8C9C9 103 aa12.46□□□□□ -0.41
Ptx3-201ENSMUST00000029421 Ndufs5Q99LY9 106 aa12.45□□□□□ -0.42
Ptx3-201ENSMUST00000029421 Krtap19-5O08632 62 aa12.44□□□□□ -0.42
Ptx3-201ENSMUST00000029421 A930033H14RikG5E8X6 103 aa12.44□□□□□ -0.42
Ptx3-201ENSMUST00000029421 Dnah8Q91XQ0 4731 aa12.39□□□□□ -0.43
Ptx3-201ENSMUST00000029421 Rps29P62274 56 aa12.38□□□□□ -0.43
Ptx3-201ENSMUST00000029421 Krtap3-2Q9D638 99 aa12.37□□□□□ -0.43
Ptx3-201ENSMUST00000029421 Krtap3-3Q9D7P0 99 aa12.37□□□□□ -0.43
Ptx3-201ENSMUST00000029421 Lrp1Q91ZX7 4545 aaKnown RBP12.32□□□□□ -0.44
Ptx3-201ENSMUST00000029421 Fat3Q8BNA6 4555 aa12.28□□□□□ -0.44
Ptx3-201ENSMUST00000029421 Pla2g10Q9QXX3 151 aa12.22□□□□□ -0.45
Ptx3-201ENSMUST00000029421 D6Ertd527eA0A0N4SWI3 464 aa12.21□□□□□ -0.45
Ptx3-201ENSMUST00000029421 Defb1P56386 69 aa12.21□□□□□ -0.45
Ptx3-201ENSMUST00000029421 Gm4491E0CX42 125 aa12.18□□□□□ -0.46
Ptx3-201ENSMUST00000029421 Abca13Q5SSE9 5034 aa12.14□□□□□ -0.47
Ptx3-201ENSMUST00000029421 Gm11939A2A592 99 aa12.13□□□□□ -0.47
Ptx3-201ENSMUST00000029421 Gm9821Q8K076 103 aa12.1□□□□□ -0.47
Ptx3-201ENSMUST00000029421 Gm9736A0A1W2P7N1 277 aa12.06□□□□□ -0.48
Ptx3-201ENSMUST00000029421 Dnhd1D3Z2X2 4750 aa12□□□□□ -0.49
Ptx3-201ENSMUST00000029421 Birc6O88738 4882 aa11.97□□□□□ -0.49
Ptx3-201ENSMUST00000029421 Herc2Q4U2R1 4836 aa11.96□□□□□ -0.49
Ptx3-201ENSMUST00000029421 Cox6b2Q80ZN9 88 aa11.92□□□□□ -0.5
Ptx3-201ENSMUST00000029421 Mycbp2Q7TPH6 4711 aa11.92□□□□□ -0.5
Ptx3-201ENSMUST00000029421 Kiaa1109A2AAE1 5005 aa11.91□□□□□ -0.5
Ptx3-201ENSMUST00000029421 Gm5767A0A0J9YTU8 78 aa11.89□□□□□ -0.51
Ptx3-201ENSMUST00000029421 Gm5965D3Z724 196 aa11.83□□□□□ -0.52
Ptx3-201ENSMUST00000029421 Gm20537G3UYK7 97 aa11.74□□□□□ -0.53
Ptx3-201ENSMUST00000029421 HydinQ80W93 5154 aa11.66□□□□□ -0.54
Ptx3-201ENSMUST00000029421 Gm9955Q8CEJ8 102 aa11.66□□□□□ -0.54
Ptx3-201ENSMUST00000029421 Krtap15-1Q9QZU5 150 aa11.61□□□□□ -0.55
Ptx3-201ENSMUST00000029421 Rpl37Q9D823 97 aa11.57□□□□□ -0.56
Ptx3-201ENSMUST00000029421 Gm3880A0A1B0GSB3 72 aa11.57□□□□□ -0.56
Ptx3-201ENSMUST00000029421 Gm12216A0A1W2P827 62 aa11.55□□□□□ -0.56
Ptx3-201ENSMUST00000029421 Gm17606F6ZL36 78 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms