RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Gm20604F8WIA3 75 aa11.05□□□□□ -0.64
Ccdc3-201ENSMUST00000027988 Hectd4E9Q2E4 4418 aa11.03□□□□□ -0.64
Ccdc3-201ENSMUST00000027988 Adm2Q7TNK8 150 aa11.03□□□□□ -0.64
Ccdc3-201ENSMUST00000027988 Krtap10-4Q08EG8 221 aa11.01□□□□□ -0.65
Ccdc3-201ENSMUST00000027988 1600014C23RikQ9DAX4 101 aa11□□□□□ -0.65
Ccdc3-201ENSMUST00000027988 Q8K1L6 76 aa10.99□□□□□ -0.65
Ccdc3-201ENSMUST00000027988 Stard9Q80TF6 4561 aa10.97□□□□□ -0.65
Ccdc3-201ENSMUST00000027988 Phxr4P15974 95 aa10.97□□□□□ -0.65
Ccdc3-201ENSMUST00000027988 Igkv3-3A0A140T8Q0 119 aa10.97□□□□□ -0.65
Ccdc3-201ENSMUST00000027988 NbdyA0A0N4SUI7 68 aa10.96□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 Gm10160F6Y577 67 aa10.94□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 Cypt14J3QPF7 87 aa10.93□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 Vps13dB1ART2 4390 aa10.93□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 2310050C09RikG5E8Z3 280 aa10.92□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 Krtap14O08640 167 aa10.92□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 Gm16253D3Z167 63 aa10.91□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 4933415A04RikQ9D443 101 aa10.91□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 Pkd1O08852 4293 aa10.91□□□□□ -0.66
Ccdc3-201ENSMUST00000027988 Dnah2P0C6F1 4456 aa10.89□□□□□ -0.67
Ccdc3-201ENSMUST00000027988 Tnp2P11378 117 aa10.85□□□□□ -0.67
Ccdc3-201ENSMUST00000027988 FcgbpE9Q0B5 2583 aa10.85□□□□□ -0.67
Ccdc3-201ENSMUST00000027988 Defb39Q70KL3 74 aa10.84□□□□□ -0.67
Ccdc3-201ENSMUST00000027988 Lrp1bQ9JI18 4599 aa10.82□□□□□ -0.68
Ccdc3-201ENSMUST00000027988 Znf706Q9D115 76 aaKnown RBP10.81□□□□□ -0.68
Ccdc3-201ENSMUST00000027988 Krtap13O88375 197 aa10.8□□□□□ -0.68
Ccdc3-201ENSMUST00000027988 Gm20661K7N787 53 aa10.8□□□□□ -0.68
Ccdc3-201ENSMUST00000027988 Sec61gP60060 68 aa10.79□□□□□ -0.68
Ccdc3-201ENSMUST00000027988 Gpr15lA0A0B4J1N3 78 aa10.79□□□□□ -0.68
Ccdc3-201ENSMUST00000027988 Ly6g6cQ9Z1Q4 126 aa10.77□□□□□ -0.69
Ccdc3-201ENSMUST00000027988 Gm21798J3QNU5 87 aa10.77□□□□□ -0.69
Ccdc3-201ENSMUST00000027988 Defb11Q8R2I7 77 aa10.76□□□□□ -0.69
Ccdc3-201ENSMUST00000027988 ApobE9Q414 4505 aa10.74□□□□□ -0.69
Ccdc3-201ENSMUST00000027988 Spaca4Q80ZQ0 127 aa10.72□□□□□ -0.69
Ccdc3-201ENSMUST00000027988 Krtap10-10A0A1W2P7T6 217 aa10.7□□□□□ -0.7
Ccdc3-201ENSMUST00000027988 Pkhd1E9PZ36 4059 aa10.69□□□□□ -0.7
Ccdc3-201ENSMUST00000027988 Defb13Q8R2I4 64 aa10.68□□□□□ -0.7
Ccdc3-201ENSMUST00000027988 Wfdc3Q14AE4 130 aa10.68□□□□□ -0.7
Ccdc3-201ENSMUST00000027988 Cypt15B1AXS0 87 aa10.67□□□□□ -0.7
Ccdc3-201ENSMUST00000027988 Ccdc179J3QM76 67 aa10.65□□□□□ -0.7
Ccdc3-201ENSMUST00000027988 Sox16Q62247 57 aa10.65□□□□□ -0.7
Ccdc3-201ENSMUST00000027988 9230102O04RikA2ASX7 82 aa10.64□□□□□ -0.71
Ccdc3-201ENSMUST00000027988 SptssbQ925E8 76 aa10.63□□□□□ -0.71
Ccdc3-201ENSMUST00000027988 Gm2696A0A1W2P709 240 aa10.59□□□□□ -0.71
Ccdc3-201ENSMUST00000027988 Gm10999F6Q4M4 69 aa10.51□□□□□ -0.73
Ccdc3-201ENSMUST00000027988 Gm3646F6S692 53 aa10.5□□□□□ -0.73
Ccdc3-201ENSMUST00000027988 Gm10643Q3URG9 111 aa10.49□□□□□ -0.73
Ccdc3-201ENSMUST00000027988 Ndufb1P0DN34 57 aa10.46□□□□□ -0.74
Ccdc3-201ENSMUST00000027988 Fat2Q5F226 4351 aa10.45□□□□□ -0.74
Ccdc3-201ENSMUST00000027988 Fat1A0A1L1SQU7 4645 aa10.42□□□□□ -0.74
Ccdc3-201ENSMUST00000027988 Q8BGJ3 129 aa10.4□□□□□ -0.74
Ccdc3-201ENSMUST00000027988 Defb1P56386 69 aa10.4□□□□□ -0.75
Ccdc3-201ENSMUST00000027988 SacsQ9JLC8 4582 aa10.38□□□□□ -0.75
Ccdc3-201ENSMUST00000027988 2310034C09RikQ9D746 214 aa10.38□□□□□ -0.75
Ccdc3-201ENSMUST00000027988 Krtap3-2Q9D638 99 aa10.36□□□□□ -0.75
Ccdc3-201ENSMUST00000027988 Krtap3-3Q9D7P0 99 aa10.36□□□□□ -0.75
Ccdc3-201ENSMUST00000027988 Uqcr11Q9CPX8 56 aa10.36□□□□□ -0.75
Ccdc3-201ENSMUST00000027988 2310079G19RikQ9D6L6 185 aa10.35□□□□□ -0.75
Ccdc3-201ENSMUST00000027988 Limd2Q8BGB5 128 aa10.33□□□□□ -0.76
Ccdc3-201ENSMUST00000027988 1700042G07RikB1AUF7 90 aa10.32□□□□□ -0.76
Ccdc3-201ENSMUST00000027988 Gm26620Q9CY65 116 aa10.31□□□□□ -0.76
Ccdc3-201ENSMUST00000027988 Dync1h1Q9JHU4 4644 aaKnown RBP10.29□□□□□ -0.76
Ccdc3-201ENSMUST00000027988 Ryr3A2AGL3 4863 aa10.23□□□□□ -0.77
Ccdc3-201ENSMUST00000027988 OxtP35454 125 aa10.2□□□□□ -0.78
Ccdc3-201ENSMUST00000027988 Ndufs5Q99LY9 106 aa10.2□□□□□ -0.78
Ccdc3-201ENSMUST00000027988 RetnlbQ99P86 105 aa10.18□□□□□ -0.78
Ccdc3-201ENSMUST00000027988 Pkhd1l1Q80ZA4 4249 aa10.17□□□□□ -0.78
Ccdc3-201ENSMUST00000027988 A930033H14RikG5E8X6 103 aa10.16□□□□□ -0.78
Ccdc3-201ENSMUST00000027988 Lrp1Q91ZX7 4545 aaKnown RBP10.14□□□□□ -0.79
Ccdc3-201ENSMUST00000027988 Vps13bQ80TY5 3993 aa10.12□□□□□ -0.79
Ccdc3-201ENSMUST00000027988 Gm11939A2A592 99 aa10.11□□□□□ -0.79
Ccdc3-201ENSMUST00000027988 D6Ertd527eA0A0N4SWI3 464 aa10.11□□□□□ -0.79
Ccdc3-201ENSMUST00000027988 Gm4491E0CX42 125 aa10.11□□□□□ -0.79
Ccdc3-201ENSMUST00000027988 4930507D05RikQ8C9C9 103 aa10.03□□□□□ -0.8
Ccdc3-201ENSMUST00000027988 Gm9821Q8K076 103 aa9.94□□□□□ -0.82
Ccdc3-201ENSMUST00000027988 Kmt2cQ8BRH4 4903 aa9.9□□□□□ -0.82
Ccdc3-201ENSMUST00000027988 Rps29P62274 56 aa9.89□□□□□ -0.83
Ccdc3-201ENSMUST00000027988 Mycbp2Q7TPH6 4711 aa9.81□□□□□ -0.84
Ccdc3-201ENSMUST00000027988 Gm9736A0A1W2P7N1 277 aa9.79□□□□□ -0.84
Ccdc3-201ENSMUST00000027988 Gm20537G3UYK7 97 aa9.76□□□□□ -0.85
Ccdc3-201ENSMUST00000027988 Cox6b2Q80ZN9 88 aa9.75□□□□□ -0.85
Ccdc3-201ENSMUST00000027988 Fat3Q8BNA6 4555 aa9.73□□□□□ -0.85
Ccdc3-201ENSMUST00000027988 Ryr2E9Q401 4966 aaKnown RBP9.72□□□□□ -0.85
Ccdc3-201ENSMUST00000027988 Abca13Q5SSE9 5034 aa9.7□□□□□ -0.86
Ccdc3-201ENSMUST00000027988 Krtap19-5O08632 62 aa9.69□□□□□ -0.86
Ccdc3-201ENSMUST00000027988 Pla2g10Q9QXX3 151 aa9.69□□□□□ -0.86
Ccdc3-201ENSMUST00000027988 Gm5767A0A0J9YTU8 78 aa9.68□□□□□ -0.86
Ccdc3-201ENSMUST00000027988 Gm3880A0A1B0GSB3 72 aa9.65□□□□□ -0.86
Ccdc3-201ENSMUST00000027988 Gm5965D3Z724 196 aa9.59□□□□□ -0.87
Ccdc3-201ENSMUST00000027988 Gm10382Q3V0T5 144 aa9.55□□□□□ -0.88
Ccdc3-201ENSMUST00000027988 Dnah8Q91XQ0 4731 aa9.55□□□□□ -0.88
Ccdc3-201ENSMUST00000027988 Krtap15-1Q9QZU5 150 aa9.53□□□□□ -0.88
Ccdc3-201ENSMUST00000027988 Gm12216A0A1W2P827 62 aa9.49□□□□□ -0.89
Ccdc3-201ENSMUST00000027988 Ryr1E9PZQ0 5035 aa9.47□□□□□ -0.89
Ccdc3-201ENSMUST00000027988 Rnase13Q5GAM7 153 aa9.43□□□□□ -0.9
Ccdc3-201ENSMUST00000027988 Rpl37Q9D823 97 aa9.39□□□□□ -0.91
Ccdc3-201ENSMUST00000027988 CriptO70333 101 aa9.38□□□□□ -0.91
Ccdc3-201ENSMUST00000027988 Gm9955Q8CEJ8 102 aa9.35□□□□□ -0.91
Ccdc3-201ENSMUST00000027988 Gm17606F6ZL36 78 aa9.32□□□□□ -0.92
Ccdc3-201ENSMUST00000027988 Krtap3-1A2A591 98 aa9.29□□□□□ -0.92
Ccdc3-201ENSMUST00000027988 Kiaa1109A2AAE1 5005 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms