RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Chtf8P0CG14 533 aa4.74□□□□□ -1.65
Ddb1-201ENSMUST00000025649 Muc6Q80T03 2850 aa4.74□□□□□ -1.65
Ddb1-201ENSMUST00000025649 Smim29Q8R043 75 aa4.73□□□□□ -1.65
Ddb1-201ENSMUST00000025649 2310034C09RikQ9D746 214 aa4.72□□□□□ -1.65
Ddb1-201ENSMUST00000025649 Tenm2Q9WTS5 2764 aa4.7□□□□□ -1.66
Ddb1-201ENSMUST00000025649 Gm9507D3Z5T3 223 aa4.69□□□□□ -1.66
Ddb1-201ENSMUST00000025649 Gm21798J3QNU5 87 aa4.68□□□□□ -1.66
Ddb1-201ENSMUST00000025649 Gm10643Q3URG9 111 aa4.68□□□□□ -1.66
Ddb1-201ENSMUST00000025649 Odf3bQ5M8M2 238 aa4.68□□□□□ -1.66
Ddb1-201ENSMUST00000025649 SmcpP15265 143 aa4.67□□□□□ -1.66
Ddb1-201ENSMUST00000025649 Sprr1aQ62266 144 aa4.66□□□□□ -1.66
Ddb1-201ENSMUST00000025649 6030445D17RikE9Q8F9 148 aa4.66□□□□□ -1.66
Ddb1-201ENSMUST00000025649 TnxbO35452 4006 aa4.65□□□□□ -1.66
Ddb1-201ENSMUST00000025649 Gm20538F6Z9R1 75 aa4.65□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Gm10320E9PW43 113 aa4.64□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Gm10139O88245 57 aa4.64□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Hspg2Q05793 3707 aaKnown RBP4.63□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Fam229bQ8CF36 80 aa4.62□□□□□ -1.67
Ddb1-201ENSMUST00000025649 2310050C09RikG5E8Z3 280 aa4.6□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Spink7Q6IE32 76 aa4.6□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Dnah14A0A140LIJ4 4489 aa4.6□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Dnah10D3YYQ8 4591 aa4.6□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Gm4491E0CX42 125 aa4.6□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Pla2g10Q9QXX3 151 aa4.59□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Fam229aB2KGE5 128 aa4.59□□□□□ -1.67
Ddb1-201ENSMUST00000025649 Gm16253D3Z167 63 aa4.59□□□□□ -1.67
Ddb1-201ENSMUST00000025649 2310061N02RikQ9D6S9 174 aa4.58□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Krtap15-1Q9QZU5 150 aa4.58□□□□□ -1.68
Ddb1-201ENSMUST00000025649 CriptO70333 101 aa4.58□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Gm9955Q8CEJ8 102 aa4.58□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Sec61bQ9CQS8 96 aaKnown RBP4.57□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Dnah6E9Q0B6 4144 aa4.54□□□□□ -1.68
Ddb1-201ENSMUST00000025649 TgO08710 2766 aa4.54□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Krtap29-1A2A5X4 342 aa4.53□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Krtap10-10A0A1W2P7T6 217 aa4.53□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Krtap13O88375 197 aa4.53□□□□□ -1.68
Ddb1-201ENSMUST00000025649 Krtap10-4Q08EG8 221 aa4.52□□□□□ -1.69
Ddb1-201ENSMUST00000025649 A730071L15RikQ8C4X0 137 aa4.5□□□□□ -1.69
Ddb1-201ENSMUST00000025649 Gm9918Q8BUR5 174 aa4.5□□□□□ -1.69
Ddb1-201ENSMUST00000025649 Gm5767A0A0J9YTU8 78 aa4.5□□□□□ -1.69
Ddb1-201ENSMUST00000025649 Gm3880A0A1B0GSB3 72 aa4.48□□□□□ -1.69
Ddb1-201ENSMUST00000025649 Huwe1Q7TMY8 4377 aaKnown RBP4.48□□□□□ -1.69
Ddb1-201ENSMUST00000025649 Gm37013Q8K491 104 aa4.45□□□□□ -1.7
Ddb1-201ENSMUST00000025649 Cystm1Q8K353 104 aa4.43□□□□□ -1.7
Ddb1-201ENSMUST00000025649 Kmt2aP55200 3966 aa4.43□□□□□ -1.7
Ddb1-201ENSMUST00000025649 Gm2696A0A1W2P709 240 aa4.42□□□□□ -1.7
Ddb1-201ENSMUST00000025649 Camk2n1Q6QWF9 78 aa4.42□□□□□ -1.7
Ddb1-201ENSMUST00000025649 BC029722A0A0N4SW31 51 aa4.41□□□□□ -1.7
Ddb1-201ENSMUST00000025649 Krtap14O08640 167 aa4.41□□□□□ -1.7
Ddb1-201ENSMUST00000025649 PrkdcP97313 4128 aa4.4□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Dnah17Q69Z23 4481 aa4.39□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Gm19426M0QWC7 77 aa4.39□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Csmd3Q80T79 3707 aa4.38□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Rps29P62274 56 aa4.38□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Dnah3Q8BW94 4083 aa4.37□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Rpl37Q9D823 97 aa4.36□□□□□ -1.71
Ddb1-201ENSMUST00000025649 PlecQ9QXS1 4691 aaKnown RBP4.35□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Tnp2P11378 117 aa4.35□□□□□ -1.71
Ddb1-201ENSMUST00000025649 Dnah7bL7N1Y0 4068 aa4.33□□□□□ -1.72
Ddb1-201ENSMUST00000025649 Gm2310J3QNJ2 377 aa4.27□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Gm3646F6S692 53 aa4.27□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Dync2h1Q45VK7 4306 aa4.26□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Romo1P60603 79 aa4.26□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Fras1Q80T14 4010 aa4.24□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Cox6b2Q80ZN9 88 aa4.24□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Gm10382Q3V0T5 144 aa4.22□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Dnah1E9Q8T7 4250 aa4.22□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Ryr3A2AGL3 4863 aa4.22□□□□□ -1.73
Ddb1-201ENSMUST00000025649 Dnah9B1AR51 4484 aa4.21□□□□□ -1.74
Ddb1-201ENSMUST00000025649 Dnah11E9Q7N9 4488 aa4.2□□□□□ -1.74
Ddb1-201ENSMUST00000025649 Vps13dB1ART2 4390 aa4.2□□□□□ -1.74
Ddb1-201ENSMUST00000025649 Dnah7aE9Q0T8 4024 aa4.18□□□□□ -1.74
Ddb1-201ENSMUST00000025649 Ryr1E9PZQ0 5035 aa4.16□□□□□ -1.74
Ddb1-201ENSMUST00000025649 D6Ertd527eA0A0N4SWI3 464 aa4.14□□□□□ -1.75
Ddb1-201ENSMUST00000025649 4933415A04RikQ9D443 101 aa4.14□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Ryr2E9Q401 4966 aaKnown RBP4.14□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Dnah7cA0A087WR13 4024 aa4.13□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Gm5965D3Z724 196 aa4.13□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Dync1h1Q9JHU4 4644 aaKnown RBP4.12□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Pkd1O08852 4293 aa4.11□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Dnah2P0C6F1 4456 aa4.1□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Dnah5Q8VHE6 4621 aa4.1□□□□□ -1.75
Ddb1-201ENSMUST00000025649 1700042G07RikB1AUF7 90 aa4.09□□□□□ -1.75
Ddb1-201ENSMUST00000025649 Stard9Q80TF6 4561 aa4.06□□□□□ -1.76
Ddb1-201ENSMUST00000025649 Krtap19-5O08632 62 aa4.05□□□□□ -1.76
Ddb1-201ENSMUST00000025649 2310057N15RikQ9D6T8 200 aa4.04□□□□□ -1.76
Ddb1-201ENSMUST00000025649 Fat1A0A1L1SQU7 4645 aa4.03□□□□□ -1.76
Ddb1-201ENSMUST00000025649 ApobE9Q414 4505 aa4.03□□□□□ -1.76
Ddb1-201ENSMUST00000025649 A930033H14RikG5E8X6 103 aa4.03□□□□□ -1.77
Ddb1-201ENSMUST00000025649 Gm21887J3QQ04 176 aa4.03□□□□□ -1.77
Ddb1-201ENSMUST00000025649 SacsQ9JLC8 4582 aa3.99□□□□□ -1.77
Ddb1-201ENSMUST00000025649 Herc2Q4U2R1 4836 aa3.95□□□□□ -1.78
Ddb1-201ENSMUST00000025649 Gm9736A0A1W2P7N1 277 aa3.95□□□□□ -1.78
Ddb1-201ENSMUST00000025649 Tnp1P10856 55 aa3.93□□□□□ -1.78
Ddb1-201ENSMUST00000025649 Dnah8Q91XQ0 4731 aa3.93□□□□□ -1.78
Ddb1-201ENSMUST00000025649 Lrp1bQ9JI18 4599 aa3.93□□□□□ -1.78
Ddb1-201ENSMUST00000025649 Gm17416Q30KP4 66 aa3.92□□□□□ -1.78
Ddb1-201ENSMUST00000025649 Kiaa1109A2AAE1 5005 aa3.91□□□□□ -1.78
Ddb1-201ENSMUST00000025649 Gm40193A0A1B0GT39 78 aa3.9□□□□□ -1.79
Ddb1-201ENSMUST00000025649 Pkhd1E9PZ36 4059 aa3.89□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 90.9 ms