RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 NischQ80TM9 1593 aa14.16□□□□□ -0.14
Ddb1-201ENSMUST00000025649 Gm35339A0A140LHH9 1649 aa13.87□□□□□ -0.19
Ddb1-201ENSMUST00000025649 Rhox8Q6VSS7 320 aa13.61□□□□□ -0.23
Ddb1-201ENSMUST00000025649 Abcc9P70170 1546 aa13.6□□□□□ -0.23
Ddb1-201ENSMUST00000025649 Abcc8B2RUS7 1588 aa13.51□□□□□ -0.25
Ddb1-201ENSMUST00000025649 ScribQ80U72 1612 aa12.77□□□□□ -0.37
Ddb1-201ENSMUST00000025649 NacadQ5SWP3 1504 aa12.61□□□□□ -0.39
Ddb1-201ENSMUST00000025649 Kdm5dQ62240 1548 aa12.55□□□□□ -0.4
Ddb1-201ENSMUST00000025649 Dcaf1Q80TR8 1506 aa12.44□□□□□ -0.42
Ddb1-201ENSMUST00000025649 Rb1cc1Q9ESK9 1588 aa12.37□□□□□ -0.43
Ddb1-201ENSMUST00000025649 Sycp2Q9CUU3 1500 aa12.29□□□□□ -0.44
Ddb1-201ENSMUST00000025649 Zcchc6Q5BLK4 1491 aaKnown RBP12.24□□□□□ -0.45
Ddb1-201ENSMUST00000025649 Baz1aO88379 1555 aa12.17□□□□□ -0.46
Ddb1-201ENSMUST00000025649 Ccdc136Q3TVA9 1136 aa12.13□□□□□ -0.47
Ddb1-201ENSMUST00000025649 Esf1Q3V1V3 845 aaKnown RBP12.08□□□□□ -0.48
Ddb1-201ENSMUST00000025649 Crybg2B7ZCC2 1516 aa12□□□□□ -0.49
Ddb1-201ENSMUST00000025649 BicraF8VPZ9 1578 aa11.97□□□□□ -0.49
Ddb1-201ENSMUST00000025649 Rpgrip1Q9EPQ2 1331 aa11.96□□□□□ -0.49
Ddb1-201ENSMUST00000025649 Ccdc180J3QNE4 1664 aa11.94□□□□□ -0.5
Ddb1-201ENSMUST00000025649 Cngb1E1AZ71 1325 aa11.93□□□□□ -0.5
Ddb1-201ENSMUST00000025649 Trim41Q5NCC3 630 aa11.92□□□□□ -0.5
Ddb1-201ENSMUST00000025649 Pds5bQ4VA53 1446 aaKnown RBP11.85□□□□□ -0.51
Ddb1-201ENSMUST00000025649 Zeb1Q64318 1117 aa11.83□□□□□ -0.52
Ddb1-201ENSMUST00000025649 Rtl1Q7M732 1744 aa11.82□□□□□ -0.52
Ddb1-201ENSMUST00000025649 Ehmt2Q9Z148 1263 aaKnown RBP11.81□□□□□ -0.52
Ddb1-201ENSMUST00000025649 Smarca2Q6DIC0 1577 aa11.77□□□□□ -0.53
Ddb1-201ENSMUST00000025649 Cecr2E9Q2Z1 1453 aa11.75□□□□□ -0.53
Ddb1-201ENSMUST00000025649 Npm2Q80W85 207 aa11.75□□□□□ -0.53
Ddb1-201ENSMUST00000025649 Gab3Q8BSM5 595 aa11.74□□□□□ -0.53
Ddb1-201ENSMUST00000025649 Ube2uB1AUC4 352 aa11.73□□□□□ -0.53
Ddb1-201ENSMUST00000025649 Atad2bE9Q166 1460 aaKnown RBP11.73□□□□□ -0.53
Ddb1-201ENSMUST00000025649 Brd4Q9ESU6 1400 aaKnown RBP11.72□□□□□ -0.53
Ddb1-201ENSMUST00000025649 Ercc6F8VPZ5 1481 aa11.68□□□□□ -0.54
Ddb1-201ENSMUST00000025649 Smarca4Q3TKT4 1613 aaKnown RBP11.67□□□□□ -0.54
Ddb1-201ENSMUST00000025649 Las1lA2BE28 776 aaKnown RBP11.64□□□□□ -0.55
Ddb1-201ENSMUST00000025649 Myt1lP97500 1187 aa11.6□□□□□ -0.55
Ddb1-201ENSMUST00000025649 Iqgap2Q3UQ44 1575 aa11.58□□□□□ -0.56
Ddb1-201ENSMUST00000025649 Ubl4bQ9CQ84 188 aa11.55□□□□□ -0.56
Ddb1-201ENSMUST00000025649 Wdr66E9Q743 1299 aa11.55□□□□□ -0.56
Ddb1-201ENSMUST00000025649 Dnajc5bQ9CQ94 199 aa11.55□□□□□ -0.56
Ddb1-201ENSMUST00000025649 CftrP26361 1476 aa11.54□□□□□ -0.56
Ddb1-201ENSMUST00000025649 Synj1Q8CHC4 1574 aa11.51□□□□□ -0.57
Ddb1-201ENSMUST00000025649 Phldb1Q6PDH0 1371 aaKnown RBP11.45□□□□□ -0.58
Ddb1-201ENSMUST00000025649 Cttnbp2B9EJA2 1648 aa11.45□□□□□ -0.58
Ddb1-201ENSMUST00000025649 Il27Q8K3I6 234 aa11.44□□□□□ -0.58
Ddb1-201ENSMUST00000025649 Frmpd1A2AKB4 1549 aa11.42□□□□□ -0.58
Ddb1-201ENSMUST00000025649 Wdr62Q3U3T8 1523 aa11.39□□□□□ -0.59
Ddb1-201ENSMUST00000025649 Thoc2B1AZI6 1594 aaKnown RBP11.39□□□□□ -0.59
Ddb1-201ENSMUST00000025649 Cc2d2aQ8CFW7 1633 aa11.38□□□□□ -0.59
Ddb1-201ENSMUST00000025649 Npm1Q61937 292 aaKnown RBP11.37□□□□□ -0.59
Ddb1-201ENSMUST00000025649 Rsf1E9PWW9 1441 aaKnown RBP11.37□□□□□ -0.59
Ddb1-201ENSMUST00000025649 Kif15Q6P9L6 1387 aa11.36□□□□□ -0.59
Ddb1-201ENSMUST00000025649 Golga3P55937 1487 aa11.35□□□□□ -0.59
Ddb1-201ENSMUST00000025649 UbtfP25976 765 aaKnown RBP11.26□□□□□ -0.61
Ddb1-201ENSMUST00000025649 HrcG5E8J6 738 aa11.25□□□□□ -0.61
Ddb1-201ENSMUST00000025649 Fam135aQ6NS59 1506 aa11.24□□□□□ -0.61
Ddb1-201ENSMUST00000025649 Pelp1Q9DBD5 1123 aaKnown RBP11.23□□□□□ -0.61
Ddb1-201ENSMUST00000025649 Cux2P70298 1426 aa11.22□□□□□ -0.61
Ddb1-201ENSMUST00000025649 NefmP08553 848 aa11.22□□□□□ -0.61
Ddb1-201ENSMUST00000025649 Chic1Q8CBW7 227 aa11.21□□□□□ -0.62
Ddb1-201ENSMUST00000025649 Ccdc18Q640L5 1455 aa11.17□□□□□ -0.62
Ddb1-201ENSMUST00000025649 Mrc2Q64449 1479 aa11.16□□□□□ -0.62
Ddb1-201ENSMUST00000025649 Cep164Q5DU05 1446 aa11.16□□□□□ -0.62
Ddb1-201ENSMUST00000025649 Fmn1Q05860 1466 aa11.14□□□□□ -0.63
Ddb1-201ENSMUST00000025649 Baz1bQ9Z277 1479 aa11.11□□□□□ -0.63
Ddb1-201ENSMUST00000025649 Ccdc88bQ4QRL3 1481 aa11.1□□□□□ -0.63
Ddb1-201ENSMUST00000025649 Stra8P70278 393 aa11.07□□□□□ -0.64
Ddb1-201ENSMUST00000025649 Acin1Q9JIX8 1338 aaKnown RBP11.07□□□□□ -0.64
Ddb1-201ENSMUST00000025649 Top2bQ64511 1612 aa11.06□□□□□ -0.64
Ddb1-201ENSMUST00000025649 Lamc3Q9R0B6 1581 aa11.06□□□□□ -0.64
Ddb1-201ENSMUST00000025649 Unc13aQ4KUS2 1712 aa11.05□□□□□ -0.64
Ddb1-201ENSMUST00000025649 LrpprcQ6PB66 1392 aaKnown RBP11.02□□□□□ -0.65
Ddb1-201ENSMUST00000025649 Dhx29Q6PGC1 1365 aaKnown RBP11□□□□□ -0.65
Ddb1-201ENSMUST00000025649 Fam50aQ9WV03 339 aaKnown RBP11□□□□□ -0.65
Ddb1-201ENSMUST00000025649 Ap3b1Q9Z1T1 1105 aa10.97□□□□□ -0.65
Ddb1-201ENSMUST00000025649 Slc24a1Q91WD8 1130 aa10.95□□□□□ -0.66
Ddb1-201ENSMUST00000025649 Anp32bQ9EST5 272 aaKnown RBP10.94□□□□□ -0.66
Ddb1-201ENSMUST00000025649 Camsap1A2AHC3 1581 aa10.93□□□□□ -0.66
Ddb1-201ENSMUST00000025649 TnnQ80Z71 1560 aa10.91□□□□□ -0.66
Ddb1-201ENSMUST00000025649 Urb2E9Q7L1 1524 aaKnown RBP10.89□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Os9Q8K2C7 672 aa10.89□□□□□ -0.67
Ddb1-201ENSMUST00000025649 PogzQ8BZH4 1409 aaKnown RBP10.89□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Neurod1Q60867 357 aa10.88□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Top2aQ01320 1528 aaKnown RBP10.87□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Duox2A2AQ99 1517 aa10.87□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Kif21aQ9QXL2 1672 aa10.87□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Grin2bQ01097 1482 aa10.86□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Plb1Q3TTY0 1478 aa10.86□□□□□ -0.67
Ddb1-201ENSMUST00000025649 NclP09405 707 aaKnown RBP10.86□□□□□ -0.67
Ddb1-201ENSMUST00000025649 NrdcQ8BHG1 1161 aa10.84□□□□□ -0.67
Ddb1-201ENSMUST00000025649 Efcab5A0JP43 1406 aa10.84□□□□□ -0.67
Ddb1-201ENSMUST00000025649 CenpbP27790 599 aa10.83□□□□□ -0.68
Ddb1-201ENSMUST00000025649 Crocc2F6XLV1 1638 aa10.83□□□□□ -0.68
Ddb1-201ENSMUST00000025649 NrkQ9R0G8 1455 aa10.8□□□□□ -0.68
Ddb1-201ENSMUST00000025649 Shroom4Q1W617 1475 aa10.79□□□□□ -0.68
Ddb1-201ENSMUST00000025649 Cdk11bP24788 784 aaKnown RBP10.77□□□□□ -0.68
Ddb1-201ENSMUST00000025649 PtprkP35822 1457 aa10.77□□□□□ -0.69
Ddb1-201ENSMUST00000025649 Lrriq1Q0P5X1 1673 aa10.77□□□□□ -0.69
Ddb1-201ENSMUST00000025649 Rad54l2Q99NG0 1466 aa10.77□□□□□ -0.69
Ddb1-201ENSMUST00000025649 Ift140E9PY46 1464 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 90.7 ms