RNA–Protein interactions for RNA: ENSMUST00000023070.5

Upk3a-201, Transcript of Uroplakin-3a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3a, Length 1,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3a-201ENSMUST00000023070 Gm12353A2AGJ4 60 aa8.53□□□□□ -1.04
Upk3a-201ENSMUST00000023070 SspoQ8CG65 4998 aa8.53□□□□□ -1.04
Upk3a-201ENSMUST00000023070 Defb47Q30KN1 79 aa8.52□□□□□ -1.05
Upk3a-201ENSMUST00000023070 Fam229aB2KGE5 128 aa8.5□□□□□ -1.05
Upk3a-201ENSMUST00000023070 Syne2Q6ZWQ0 6874 aaKnown RBP8.49□□□□□ -1.05
Upk3a-201ENSMUST00000023070 Gm29423A0A087WRM1 55 aa8.48□□□□□ -1.05
Upk3a-201ENSMUST00000023070 4930524J08RikQ9CUJ5 163 aa8.47□□□□□ -1.05
Upk3a-201ENSMUST00000023070 C130032M10RikQ8C888 123 aa8.46□□□□□ -1.06
Upk3a-201ENSMUST00000023070 Tac4Q99N14 128 aa8.46□□□□□ -1.06
Upk3a-201ENSMUST00000023070 Igkv3-3A0A140T8Q0 119 aa8.45□□□□□ -1.06
Upk3a-201ENSMUST00000023070 Ctxnd2A0A1B0GQX3 59 aa8.45□□□□□ -1.06
Upk3a-201ENSMUST00000023070 P01843 105 aa8.45□□□□□ -1.06
Upk3a-201ENSMUST00000023070 CenpwQ3URR0 86 aa8.43□□□□□ -1.06
Upk3a-201ENSMUST00000023070 7530416G11RikJ3QJX6 159 aa8.41□□□□□ -1.06
Upk3a-201ENSMUST00000023070 Ube2v1Q9CZY3 147 aa8.4□□□□□ -1.06
Upk3a-201ENSMUST00000023070 Rnase13Q5GAM7 153 aa8.39□□□□□ -1.07
Upk3a-201ENSMUST00000023070 Defa21Q8C1P2 93 aa8.39□□□□□ -1.07
Upk3a-201ENSMUST00000023070 Igkv8-19A0A0G2JFN8 121 aa8.38□□□□□ -1.07
Upk3a-201ENSMUST00000023070 Gm44790A0A0N4SV91 103 aa8.36□□□□□ -1.07
Upk3a-201ENSMUST00000023070 Smim13E9Q942 88 aa8.36□□□□□ -1.07
Upk3a-201ENSMUST00000023070 Tma7Q8K003 64 aaKnown RBP8.36□□□□□ -1.07
Upk3a-201ENSMUST00000023070 A0A1Y7VLE6 161 aa8.35□□□□□ -1.07
Upk3a-201ENSMUST00000023070 Sprr2jO70561 109 aa8.35□□□□□ -1.07
Upk3a-201ENSMUST00000023070 Krtap28-10A0A1Y7VP58 119 aa8.33□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Trav14d-3-dv8A0A075B619 120 aa8.32□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Krtap28-13A0A087WQP5 138 aa8.3□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Igkv8-27A0A0G2JF28 120 aa8.29□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Gm11596B1AQB0 205 aa8.29□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Cox6cQ9CPQ1 76 aa8.29□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Gm20604F8WIA3 75 aa8.28□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Gm28051J3QMA2 81 aa8.28□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Tmem213Q08EA8 116 aa8.28□□□□□ -1.08
Upk3a-201ENSMUST00000023070 UqcrqQ9CQ69 82 aa8.28□□□□□ -1.08
Upk3a-201ENSMUST00000023070 Acyp1P56376 99 aa8.27□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Apoc4Q61268 124 aa8.27□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Cby1Q9D1C2 127 aa8.27□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Ccl17F6R5P4 103 aa8.26□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Rbm3O89086 153 aaKnown RBP8.26□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Gm10135F6TEE5 83 aa8.24□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Scgb1b2O35176 93 aa8.24□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Chtf8P0CG14 533 aa8.22□□□□□ -1.09
Upk3a-201ENSMUST00000023070 Mrpl34Q99N91 92 aa8.22□□□□□ -1.09
Upk3a-201ENSMUST00000023070 BikO70337 150 aa8.21□□□□□ -1.1
Upk3a-201ENSMUST00000023070 Prr13Q9CQJ5 137 aa8.21□□□□□ -1.1
Upk3a-201ENSMUST00000023070 Defb13Q8R2I4 64 aa8.2□□□□□ -1.1
Upk3a-201ENSMUST00000023070 A030005K14RikA0A1Y7VNY1 122 aa8.19□□□□□ -1.1
Upk3a-201ENSMUST00000023070 Gm10267M0QWD8 85 aa8.19□□□□□ -1.1
Upk3a-201ENSMUST00000023070 Q9DAA3 117 aa8.19□□□□□ -1.1
Upk3a-201ENSMUST00000023070 Reg3aO09037 175 aa8.18□□□□□ -1.1
Upk3a-201ENSMUST00000023070 Gm37013Q8K491 104 aa8.18□□□□□ -1.1
Upk3a-201ENSMUST00000023070 NrepQ07475 68 aa8.15□□□□□ -1.1
Upk3a-201ENSMUST00000023070 B930094E09RikQ8C4T2 136 aa8.15□□□□□ -1.1
Upk3a-201ENSMUST00000023070 Gm17416Q30KP4 66 aa8.14□□□□□ -1.11
Upk3a-201ENSMUST00000023070 Krtap4-6Q3V4B7 195 aa8.14□□□□□ -1.11
Upk3a-201ENSMUST00000023070 Muc5bE9Q5I3 4800 aa8.11□□□□□ -1.11
Upk3a-201ENSMUST00000023070 2210017I01RikA0A0A6YVV1 95 aa8.1□□□□□ -1.11
Upk3a-201ENSMUST00000023070 Pde6gP09174 87 aa8.1□□□□□ -1.11
Upk3a-201ENSMUST00000023070 Cox7cP17665 63 aa8.1□□□□□ -1.11
Upk3a-201ENSMUST00000023070 Gm28539A0A087WSL9 92 aa8.09□□□□□ -1.11
Upk3a-201ENSMUST00000023070 Spink13Q3UTS8 97 aa8.09□□□□□ -1.11
Upk3a-201ENSMUST00000023070 Krtap13-1Q8K198 168 aa8.07□□□□□ -1.12
Upk3a-201ENSMUST00000023070 Lce1jD3YUU5 139 aa8.06□□□□□ -1.12
Upk3a-201ENSMUST00000023070 Lyrm7Q9DA03 104 aa8.02□□□□□ -1.13
Upk3a-201ENSMUST00000023070 MturnQ8CGA4 131 aa7.97□□□□□ -1.13
Upk3a-201ENSMUST00000023070 Gm4491E0CX42 125 aa7.96□□□□□ -1.14
Upk3a-201ENSMUST00000023070 BtcQ05928 177 aa7.95□□□□□ -1.14
Upk3a-201ENSMUST00000023070 Krtap9-5A2A5X3 358 aa7.93□□□□□ -1.14
Upk3a-201ENSMUST00000023070 Krtap1-5A2A590 122 aa7.92□□□□□ -1.14
Upk3a-201ENSMUST00000023070 Mdn1A2ANY6 5589 aaKnown RBP7.92□□□□□ -1.14
Upk3a-201ENSMUST00000023070 Krtap19-2Q925I0 141 aa7.9□□□□□ -1.14
Upk3a-201ENSMUST00000023070 Ormdl1Q921I0 153 aa7.88□□□□□ -1.15
Upk3a-201ENSMUST00000023070 Gm11564A2A4L9 201 aa7.82□□□□□ -1.16
Upk3a-201ENSMUST00000023070 Gm11595B1AQA7 289 aa7.82□□□□□ -1.16
Upk3a-201ENSMUST00000023070 Krtap4-8B1AQA8 209 aa7.82□□□□□ -1.16
Upk3a-201ENSMUST00000023070 Xcl1P47993 114 aa7.8□□□□□ -1.16
Upk3a-201ENSMUST00000023070 MplkipQ9D011 178 aa7.8□□□□□ -1.16
Upk3a-201ENSMUST00000023070 Gm11027G8JL69 66 aa7.76□□□□□ -1.17
Upk3a-201ENSMUST00000023070 Naa38Q9D2U5 125 aa7.76□□□□□ -1.17
Upk3a-201ENSMUST00000023070 2310079G19RikQ9D6L6 185 aa7.75□□□□□ -1.17
Upk3a-201ENSMUST00000023070 9230102O04RikA2ASX7 82 aa7.69□□□□□ -1.18
Upk3a-201ENSMUST00000023070 Krtap12-1Q9Z287 130 aa7.69□□□□□ -1.18
Upk3a-201ENSMUST00000023070 Gm26602M0QWA4 95 aa7.68□□□□□ -1.18
Upk3a-201ENSMUST00000023070 Fam229bQ8CF36 80 aa7.68□□□□□ -1.18
Upk3a-201ENSMUST00000023070 Tax1bp3Q9DBG9 124 aa7.68□□□□□ -1.18
Upk3a-201ENSMUST00000023070 Ubl5Q9EPV8 73 aa7.67□□□□□ -1.18
Upk3a-201ENSMUST00000023070 Gm26920S4R2A5 56 aa7.66□□□□□ -1.18
Upk3a-201ENSMUST00000023070 Pla2g10Q9QXX3 151 aa7.63□□□□□ -1.19
Upk3a-201ENSMUST00000023070 Prr15lQ8JZM2 100 aa7.62□□□□□ -1.19
Upk3a-201ENSMUST00000023070 Q8BGJ3 129 aa7.61□□□□□ -1.19
Upk3a-201ENSMUST00000023070 Gm6358A0A087WPH4 74 aa7.6□□□□□ -1.19
Upk3a-201ENSMUST00000023070 Gm19426M0QWC7 77 aa7.59□□□□□ -1.19
Upk3a-201ENSMUST00000023070 A0A286YE49 62 aa7.58□□□□□ -1.2
Upk3a-201ENSMUST00000023070 Krtap4-9B1AQA9 244 aa7.58□□□□□ -1.2
Upk3a-201ENSMUST00000023070 A0A286YCQ8 80 aa7.56□□□□□ -1.2
Upk3a-201ENSMUST00000023070 Tmem254aP0DN89 123 aa7.56□□□□□ -1.2
Upk3a-201ENSMUST00000023070 Tmem254bP0DN90 123 aa7.56□□□□□ -1.2
Upk3a-201ENSMUST00000023070 Tmem254cP0DN91 123 aa7.56□□□□□ -1.2
Upk3a-201ENSMUST00000023070 Trav3-1Q5R1I8 114 aa7.56□□□□□ -1.2
Upk3a-201ENSMUST00000023070 Samd13D3YUG0 102 aa7.55□□□□□ -1.2
Upk3a-201ENSMUST00000023070 Gm10999F6Q4M4 69 aa7.55□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms