RNA–Protein interactions for RNA: ENSMUST00000023070.5

Upk3a-201, Transcript of Uroplakin-3a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3a, Length 1,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3a-201ENSMUST00000023070 Gm35339A0A140LHH9 1649 aa37.98■■■■□ 3.67
Upk3a-201ENSMUST00000023070 NischQ80TM9 1593 aa37.41■■■■□ 3.58
Upk3a-201ENSMUST00000023070 Abcc8B2RUS7 1588 aa36.29■■■■□ 3.4
Upk3a-201ENSMUST00000023070 Abcc9P70170 1546 aa36.1■■■■□ 3.37
Upk3a-201ENSMUST00000023070 ScribQ80U72 1612 aa35.2■■■■□ 3.23
Upk3a-201ENSMUST00000023070 NacadQ5SWP3 1504 aa34.08■■■■□ 3.05
Upk3a-201ENSMUST00000023070 Kdm5dQ62240 1548 aa33.95■■■■□ 3.03
Upk3a-201ENSMUST00000023070 Sycp2Q9CUU3 1500 aa33.43■■■□□ 2.94
Upk3a-201ENSMUST00000023070 Dcaf1Q80TR8 1506 aa33.23■■■□□ 2.91
Upk3a-201ENSMUST00000023070 BicraF8VPZ9 1578 aa33.04■■■□□ 2.88
Upk3a-201ENSMUST00000023070 Dnajc5bQ9CQ94 199 aa32.9■■■□□ 2.86
Upk3a-201ENSMUST00000023070 Rb1cc1Q9ESK9 1588 aa32.53■■■□□ 2.8
Upk3a-201ENSMUST00000023070 Pds5bQ4VA53 1446 aaKnown RBP32.22■■■□□ 2.75
Upk3a-201ENSMUST00000023070 Baz1aO88379 1555 aa32.05■■■□□ 2.72
Upk3a-201ENSMUST00000023070 Rhox8Q6VSS7 320 aa32.04■■■□□ 2.72
Upk3a-201ENSMUST00000023070 Crybg2B7ZCC2 1516 aa32.04■■■□□ 2.72
Upk3a-201ENSMUST00000023070 Thoc2B1AZI6 1594 aaKnown RBP32.02■■■□□ 2.72
Upk3a-201ENSMUST00000023070 Ccdc180J3QNE4 1664 aa31.89■■■□□ 2.7
Upk3a-201ENSMUST00000023070 Atad2bE9Q166 1460 aaKnown RBP31.82■■■□□ 2.68
Upk3a-201ENSMUST00000023070 Zcchc6Q5BLK4 1491 aaKnown RBP31.72■■■□□ 2.67
Upk3a-201ENSMUST00000023070 Cc2d2aQ8CFW7 1633 aa31.54■■■□□ 2.64
Upk3a-201ENSMUST00000023070 Ercc6F8VPZ5 1481 aa31.47■■■□□ 2.63
Upk3a-201ENSMUST00000023070 Smarca2Q6DIC0 1577 aa31.4■■■□□ 2.62
Upk3a-201ENSMUST00000023070 Smarca4Q3TKT4 1613 aaKnown RBP31.35■■■□□ 2.61
Upk3a-201ENSMUST00000023070 Iqgap2Q3UQ44 1575 aa31.25■■■□□ 2.59
Upk3a-201ENSMUST00000023070 Cecr2E9Q2Z1 1453 aa31.24■■■□□ 2.59
Upk3a-201ENSMUST00000023070 Fam135aQ6NS59 1506 aa31.22■■■□□ 2.59
Upk3a-201ENSMUST00000023070 Frmpd1A2AKB4 1549 aa31.06■■■□□ 2.56
Upk3a-201ENSMUST00000023070 Wdr62Q3U3T8 1523 aa31.05■■■□□ 2.56
Upk3a-201ENSMUST00000023070 Phldb1Q6PDH0 1371 aaKnown RBP31.01■■■□□ 2.55
Upk3a-201ENSMUST00000023070 Ubl4bQ9CQ84 188 aa30.84■■■□□ 2.53
Upk3a-201ENSMUST00000023070 Baz1bQ9Z277 1479 aa30.82■■■□□ 2.53
Upk3a-201ENSMUST00000023070 Mrc2Q64449 1479 aa30.53■■■□□ 2.48
Upk3a-201ENSMUST00000023070 Unc13aQ4KUS2 1712 aa30.53■■■□□ 2.48
Upk3a-201ENSMUST00000023070 CftrP26361 1476 aa30.41■■■□□ 2.46
Upk3a-201ENSMUST00000023070 Cttnbp2B9EJA2 1648 aa30.3■■■□□ 2.44
Upk3a-201ENSMUST00000023070 Synj1Q8CHC4 1574 aa30.28■■■□□ 2.44
Upk3a-201ENSMUST00000023070 Brd4Q9ESU6 1400 aaKnown RBP30.22■■■□□ 2.43
Upk3a-201ENSMUST00000023070 Dnajc5P60904 198 aa30.15■■■□□ 2.42
Upk3a-201ENSMUST00000023070 Ccdc136Q3TVA9 1136 aa30.11■■■□□ 2.41
Upk3a-201ENSMUST00000023070 Rtl1Q7M732 1744 aa30.1■■■□□ 2.41
Upk3a-201ENSMUST00000023070 Trim41Q5NCC3 630 aa30.09■■■□□ 2.41
Upk3a-201ENSMUST00000023070 Esf1Q3V1V3 845 aaKnown RBP29.95■■■□□ 2.39
Upk3a-201ENSMUST00000023070 Cux2P70298 1426 aa29.91■■■□□ 2.38
Upk3a-201ENSMUST00000023070 Lrriq1Q0P5X1 1673 aa29.86■■■□□ 2.37
Upk3a-201ENSMUST00000023070 Kif15Q6P9L6 1387 aa29.84■■■□□ 2.37
Upk3a-201ENSMUST00000023070 Rsf1E9PWW9 1441 aaKnown RBP29.84■■■□□ 2.37
Upk3a-201ENSMUST00000023070 Kif21aQ9QXL2 1672 aa29.68■■■□□ 2.34
Upk3a-201ENSMUST00000023070 Npm1Q61937 292 aaKnown RBP29.64■■■□□ 2.34
Upk3a-201ENSMUST00000023070 Lamc3Q9R0B6 1581 aa29.59■■■□□ 2.33
Upk3a-201ENSMUST00000023070 Cep164Q5DU05 1446 aa29.43■■■□□ 2.3
Upk3a-201ENSMUST00000023070 Eif4g3Q80XI3 1579 aaKnown RBP29.41■■■□□ 2.3
Upk3a-201ENSMUST00000023070 Shroom2A2ALU4 1481 aa29.34■■■□□ 2.29
Upk3a-201ENSMUST00000023070 Urb2E9Q7L1 1524 aaKnown RBP29.27■■■□□ 2.28
Upk3a-201ENSMUST00000023070 Il27Q8K3I6 234 aa29.26■■■□□ 2.27
Upk3a-201ENSMUST00000023070 Dhx29Q6PGC1 1365 aaKnown RBP29.26■■■□□ 2.27
Upk3a-201ENSMUST00000023070 Plb1Q3TTY0 1478 aa29.23■■■□□ 2.27
Upk3a-201ENSMUST00000023070 Ccdc18Q640L5 1455 aa29.17■■■□□ 2.26
Upk3a-201ENSMUST00000023070 LrpprcQ6PB66 1392 aaKnown RBP29.14■■■□□ 2.26
Upk3a-201ENSMUST00000023070 Pabpn1Q8CCS6 302 aaKnown RBP29.09■■■□□ 2.25
Upk3a-201ENSMUST00000023070 TnnQ80Z71 1560 aa29.09■■■□□ 2.25
Upk3a-201ENSMUST00000023070 Col17a1Q07563 1470 aa29.05■■■□□ 2.24
Upk3a-201ENSMUST00000023070 Crocc2F6XLV1 1638 aa29.02■■■□□ 2.24
Upk3a-201ENSMUST00000023070 Golga3P55937 1487 aa29■■■□□ 2.23
Upk3a-201ENSMUST00000023070 Camsap1A2AHC3 1581 aa28.99■■■□□ 2.23
Upk3a-201ENSMUST00000023070 Cngb1E1AZ71 1325 aa28.97■■■□□ 2.23
Upk3a-201ENSMUST00000023070 Top2bQ64511 1612 aa28.97■■■□□ 2.23
Upk3a-201ENSMUST00000023070 PogzQ8BZH4 1409 aaKnown RBP28.91■■■□□ 2.22
Upk3a-201ENSMUST00000023070 Ift140E9PY46 1464 aa28.91■■■□□ 2.22
Upk3a-201ENSMUST00000023070 Pelp1Q9DBD5 1123 aaKnown RBP28.85■■■□□ 2.21
Upk3a-201ENSMUST00000023070 Rusc2Q80U22 1514 aa28.84■■■□□ 2.21
Upk3a-201ENSMUST00000023070 Duox2A2AQ99 1517 aa28.77■■■□□ 2.2
Upk3a-201ENSMUST00000023070 Fmn1Q05860 1466 aa28.74■■■□□ 2.19
Upk3a-201ENSMUST00000023070 Disp1Q3TDN0 1521 aa28.69■■■□□ 2.18
Upk3a-201ENSMUST00000023070 Grin2bQ01097 1482 aa28.6■■■□□ 2.17
Upk3a-201ENSMUST00000023070 Zcchc11B2RX14 1644 aaKnown RBP28.59■■■□□ 2.17
Upk3a-201ENSMUST00000023070 Cc2d2bA0A286YDU8 1405 aa28.53■■■□□ 2.16
Upk3a-201ENSMUST00000023070 Nup160Q9Z0W3 1402 aaKnown RBP28.53■■■□□ 2.16
Upk3a-201ENSMUST00000023070 Efcab5A0JP43 1406 aa28.49■■■□□ 2.15
Upk3a-201ENSMUST00000023070 Samd9lQ69Z37 1561 aa28.47■■■□□ 2.15
Upk3a-201ENSMUST00000023070 Setd1bQ8CFT2 1985 aa28.47■■■□□ 2.15
Upk3a-201ENSMUST00000023070 Pbrm1Q8BSQ9 1634 aaKnown RBP28.43■■■□□ 2.14
Upk3a-201ENSMUST00000023070 Rad54l2Q99NG0 1466 aa28.38■■■□□ 2.13
Upk3a-201ENSMUST00000023070 Fgd6Q69ZL1 1399 aa28.32■■■□□ 2.12
Upk3a-201ENSMUST00000023070 Adgrl3Q80TS3 1537 aa28.3■■■□□ 2.12
Upk3a-201ENSMUST00000023070 Grin2aP35436 1464 aa28.29■■■□□ 2.12
Upk3a-201ENSMUST00000023070 PtprkP35822 1457 aa28.27■■■□□ 2.12
Upk3a-201ENSMUST00000023070 AqrQ8CFQ3 1481 aaKnown RBP28.27■■■□□ 2.12
Upk3a-201ENSMUST00000023070 Pcdh10E9PXQ7 1057 aa28.27■■■□□ 2.12
Upk3a-201ENSMUST00000023070 Magi3Q9EQJ9 1476 aa28.27■■■□□ 2.12
Upk3a-201ENSMUST00000023070 Gm156Q58A37 223 aa28.25■■■□□ 2.11
Upk3a-201ENSMUST00000023070 Gapvd1Q6PAR5 1458 aa28.2■■■□□ 2.1
Upk3a-201ENSMUST00000023070 NrkQ9R0G8 1455 aa28.19■■■□□ 2.1
Upk3a-201ENSMUST00000023070 Ttbk1Q6PCN3 1308 aa28.18■■■□□ 2.1
Upk3a-201ENSMUST00000023070 Arhgef5E9Q7D5 1581 aa28.18■■■□□ 2.1
Upk3a-201ENSMUST00000023070 Cep170Q6A065 1588 aa28.17■■■□□ 2.1
Upk3a-201ENSMUST00000023070 Ccdc88bQ4QRL3 1481 aa28.16■■■□□ 2.1
Upk3a-201ENSMUST00000023070 AknaQ80VW7 1404 aa28.09■■■□□ 2.09
Upk3a-201ENSMUST00000023070 PtprtQ99M80 1454 aa28.08■■■□□ 2.09
Upk3a-201ENSMUST00000023070 Top2aQ01320 1528 aaKnown RBP28.08■■■□□ 2.08
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms