RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Dnah9B1AR51 4484 aa4.71□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Pkhd1E9PZ36 4059 aa4.71□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Dnhd1D3Z2X2 4750 aa4.7□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Mycbp2Q7TPH6 4711 aa4.7□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 A030003K21RikA0A1Y7VIM3 128 aa4.7□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 PkigO70139 76 aa4.7□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Prp2P05143 317 aa4.7□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Q9DAA7 145 aa4.7□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Ighv2-2A0A075B5P8 116 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Gm11213A0A1B0GR83 88 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Gm10518F6UQQ9 182 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 P01821 116 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Tnp2P11378 117 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Rps28P62858 69 aaKnown RBP4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 E130208F15RikQ3UPV3 143 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Defa25Q5G864 92 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Serp2Q6TAW2 65 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 BC048502Q80Y74 154 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 EnhoQ8K1D8 76 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Leap2Q91V13 76 aa4.69□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Gm9805F6YK59 57 aa4.68□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Defa1P11477 93 aa4.68□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Ubl5Q9EPV8 73 aa4.68□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Igkv8-24A0A140T8P5 121 aa4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 7530416G11RikJ3QJX6 159 aa4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Gm7102J3QQ10 178 aa4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 MifP34884 115 aaKnown RBP4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Bles03Q8VD62 251 aa4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Higd2aQ9CQJ1 106 aa4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Ndufc1Q9CQY9 76 aa4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Reg3dQ9QUS9 175 aa4.67□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Igkv8-16A0A0G2JDG9 121 aa4.66□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Krtap11-1E9Q2E9 183 aa4.66□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Defa16P50714 93 aa4.66□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Gm7276Q3TYW4 209 aa4.66□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 9530003J23RikQ8BM26 151 aa4.66□□□□□ -1.66
Ccdc47-202ENSMUST00000106865 Igkv3-1A0A075B5P1 119 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Igkv8-27A0A0G2JF28 120 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Igkv8-30A0A140T8M3 121 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Igkv8-21A0A140T8P7 120 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Gm19935A0A1B0GSF9 52 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 2310034G01RikA0A286YDL3 209 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Rbm3O89086 153 aaKnown RBP4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 GhrhP16043 103 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Snhg11Q4G0K9 87 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Cox7b2Q9D2H1 82 aa4.65□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Igkv8-34A0A0G2JDU0 121 aa4.64□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Trav14-1A0A0G2JF94 121 aa4.64□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Gm10272F7CZ33 110 aa4.64□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Elof1P60003 83 aa4.64□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Msrb1Q9JLC3 116 aa4.64□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Igkv2-109A0A075B5K6 120 aa4.63□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Igkv4-58A0A0G2JGI6 119 aa4.63□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Gm16181B0V2H2 73 aa4.63□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Klk12B2RVZ0 247 aa4.63□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 ScxQ64124 207 aa4.63□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Sprr4Q8CGN8 76 aa4.63□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Gm17577J3QNF7 156 aa4.62□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Lamtor3O88653 124 aa4.62□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Tmem258P61166 79 aa4.62□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 A730071L15RikQ8C4X0 137 aa4.62□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Vps13bQ80TY5 3993 aa4.62□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Krtap29-1A2A5X4 342 aa4.61□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Samd13D3YUG0 102 aa4.61□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 4930518I15RikQ3V2W7 57 aa4.61□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Wfdc12Q9JHY3 85 aa4.61□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 BaalcQ8VHV1 145 aa4.6□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Sprr2jO70561 109 aa4.59□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Prh1P05142 261 aa4.59□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Defa2P28309 93 aa4.59□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Camk2n2Q78WH7 79 aa4.59□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 Cystm1Q8K353 104 aa4.59□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 AplnQ9R0R4 77 aa4.59□□□□□ -1.67
Ccdc47-202ENSMUST00000106865 4932415D10RikA0A1W2P6U8 4986 aa4.58□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Gm11627A6PWP4 55 aa4.58□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Reg3bP35230 175 aa4.58□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Fam19a1Q7TPG8 133 aa4.58□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 A830005F24RikQ8BRT5 167 aa4.58□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Ighv13-2A0A0A6YWN3 119 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Igkv1-110A0A0B4J1I0 119 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 E130218I03RikA0A0U1RNU5 63 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 A730009L09RikA0A1B0GS82 72 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Tmem243B2RVB9 118 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Vpreb2P13373 142 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Defa7P50705 93 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 D130052B06RikQ3UW13 202 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 A930002H24RikQ8C8Y3 163 aa4.57□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Gm37389A0A0A6YW05 95 aa4.56□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Prol1E9PYQ4 312 aa4.56□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Gm10337F7DEP7 55 aa4.56□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Sprr1aQ62266 144 aa4.56□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Pou2af1Q64693 256 aa4.56□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Dmac1Q9CQ00 111 aa4.56□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Ubr4A2AN08 5180 aa4.56□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Igkv8-28A0A0G2JE47 121 aa4.55□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Sfta2E9PXB6 77 aa4.55□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Mt3P28184 68 aa4.55□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 H2al1aQ5M8Q2 105 aa4.55□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Cd164Q9R0L9 197 aa4.55□□□□□ -1.68
Ccdc47-202ENSMUST00000106865 Igkv1-88A0A140T8N1 120 aa4.54□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms