RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Igkv8-21A0A140T8P7 120 aa9.15□□□□□ -0.94
Usf3-201ENSMUST00000088356 Tmem243B2RVB9 118 aa9.15□□□□□ -0.94
Usf3-201ENSMUST00000088356 Elof1P60003 83 aa9.15□□□□□ -0.94
Usf3-201ENSMUST00000088356 Krtap4-1Q3UUY3 169 aa9.15□□□□□ -0.94
Usf3-201ENSMUST00000088356 A0A286YE02 88 aa9.14□□□□□ -0.95
Usf3-201ENSMUST00000088356 Cks1brtQ3UNC9 96 aa9.14□□□□□ -0.95
Usf3-201ENSMUST00000088356 Cited4Q9WUL8 182 aa9.14□□□□□ -0.95
Usf3-201ENSMUST00000088356 4930442H23RikQ9D5G7 103 aa9.13□□□□□ -0.95
Usf3-201ENSMUST00000088356 Hist3h2bbQ8CGP0 126 aa9.12□□□□□ -0.95
Usf3-201ENSMUST00000088356 Chchd1Q9CQA6 118 aa9.12□□□□□ -0.95
Usf3-201ENSMUST00000088356 Hist3h2baQ9D2U9 126 aa9.12□□□□□ -0.95
Usf3-201ENSMUST00000088356 Igkv4-58A0A0G2JGI6 119 aa9.11□□□□□ -0.95
Usf3-201ENSMUST00000088356 Hbb-bsA8DUK4 147 aa9.11□□□□□ -0.95
Usf3-201ENSMUST00000088356 Hbb-b1P02088 147 aa9.11□□□□□ -0.95
Usf3-201ENSMUST00000088356 Hint1P70349 126 aaKnown RBP9.11□□□□□ -0.95
Usf3-201ENSMUST00000088356 PpdpfQ9CR37 115 aa9.11□□□□□ -0.95
Usf3-201ENSMUST00000088356 Trav4-3A0A0B4J1K1 110 aa9.1□□□□□ -0.95
Usf3-201ENSMUST00000088356 Gpx1P11352 201 aa9.09□□□□□ -0.95
Usf3-201ENSMUST00000088356 4930535I16RikQ9CUI2 172 aa9.09□□□□□ -0.95
Usf3-201ENSMUST00000088356 Ighv1-62-2A0A0A6YXZ4 119 aa9.08□□□□□ -0.96
Usf3-201ENSMUST00000088356 Fam229aB2KGE5 128 aa9.07□□□□□ -0.96
Usf3-201ENSMUST00000088356 A730071L15RikQ8C4X0 137 aa9.07□□□□□ -0.96
Usf3-201ENSMUST00000088356 Gm16253D3Z167 63 aa9.06□□□□□ -0.96
Usf3-201ENSMUST00000088356 Hist1h2bfP10853 126 aa9.06□□□□□ -0.96
Usf3-201ENSMUST00000088356 Hist1h2bbQ64475 126 aa9.06□□□□□ -0.96
Usf3-201ENSMUST00000088356 Ndufv3Q8BK30 104 aaKnown RBP9.06□□□□□ -0.96
Usf3-201ENSMUST00000088356 Hist1h2bkQ8CGP1 126 aaKnown RBP9.06□□□□□ -0.96
Usf3-201ENSMUST00000088356 Hist1h2bpQ8CGP2 126 aaKnown RBP9.06□□□□□ -0.96
Usf3-201ENSMUST00000088356 Ctxnd2A0A1B0GQX3 59 aa9.05□□□□□ -0.96
Usf3-201ENSMUST00000088356 Pmp2P24526 132 aa9.05□□□□□ -0.96
Usf3-201ENSMUST00000088356 Timm10bQ9WV96 100 aa9.05□□□□□ -0.96
Usf3-201ENSMUST00000088356 Vamp3P63024 103 aa9.04□□□□□ -0.96
Usf3-201ENSMUST00000088356 Gm10577Q3UDV9 132 aa9.04□□□□□ -0.96
Usf3-201ENSMUST00000088356 SmagpQ99KC7 97 aa9.04□□□□□ -0.96
Usf3-201ENSMUST00000088356 Gm26620Q9CY65 116 aa9.04□□□□□ -0.96
Usf3-201ENSMUST00000088356 Q8BT88 171 aa9.03□□□□□ -0.96
Usf3-201ENSMUST00000088356 H2al1nQ497L1 109 aa9.02□□□□□ -0.97
Usf3-201ENSMUST00000088356 B930094E09RikQ8C4T2 136 aa9.02□□□□□ -0.97
Usf3-201ENSMUST00000088356 Psmb2Q9R1P3 201 aa9.02□□□□□ -0.97
Usf3-201ENSMUST00000088356 Lst1O08843 95 aa9□□□□□ -0.97
Usf3-201ENSMUST00000088356 Xlr5cQ9JJR2 179 aa8.99□□□□□ -0.97
Usf3-201ENSMUST00000088356 Gm11564A2A4L9 201 aa8.98□□□□□ -0.97
Usf3-201ENSMUST00000088356 Gm11563B1AQ90 168 aa8.98□□□□□ -0.97
Usf3-201ENSMUST00000088356 Gm11595B1AQA7 289 aa8.98□□□□□ -0.97
Usf3-201ENSMUST00000088356 Krtap4-8B1AQA8 209 aa8.98□□□□□ -0.97
Usf3-201ENSMUST00000088356 Gm10308Q9CVR5 141 aa8.98□□□□□ -0.97
Usf3-201ENSMUST00000088356 Gm45753A0A1C7CYU8 86 aa8.97□□□□□ -0.97
Usf3-201ENSMUST00000088356 Vmn1r197Q8R265 298 aa8.97□□□□□ -0.97
Usf3-201ENSMUST00000088356 MalO09198 153 aa8.96□□□□□ -0.98
Usf3-201ENSMUST00000088356 Plac1Q9JI83 173 aa8.96□□□□□ -0.98
Usf3-201ENSMUST00000088356 Gm28305F6U473 122 aa8.95□□□□□ -0.98
Usf3-201ENSMUST00000088356 Triap1Q9D8Z2 76 aa8.94□□□□□ -0.98
Usf3-201ENSMUST00000088356 Gm44965A0A0N4SVR3 59 aa8.93□□□□□ -0.98
Usf3-201ENSMUST00000088356 Gm10401E9Q3K6 71 aa8.93□□□□□ -0.98
Usf3-201ENSMUST00000088356 Glrp1E9Q9S8 174 aa8.93□□□□□ -0.98
Usf3-201ENSMUST00000088356 IqcjQ8BPW0 110 aa8.93□□□□□ -0.98
Usf3-201ENSMUST00000088356 Gm5142Q8C5X9 133 aa8.92□□□□□ -0.98
Usf3-201ENSMUST00000088356 1700018G05RikA0A1B0GSI2 66 aa8.91□□□□□ -0.98
Usf3-201ENSMUST00000088356 Lage3Q9CR70 148 aa8.91□□□□□ -0.98
Usf3-201ENSMUST00000088356 Gm37389A0A0A6YW05 95 aa8.89□□□□□ -0.99
Usf3-201ENSMUST00000088356 Timm17bQ9Z0V7 172 aa8.89□□□□□ -0.99
Usf3-201ENSMUST00000088356 Trav12-3A0A075B648 115 aa8.88□□□□□ -0.99
Usf3-201ENSMUST00000088356 Igkv8-30A0A140T8M3 121 aa8.88□□□□□ -0.99
Usf3-201ENSMUST00000088356 Cops9Q3U898 57 aa8.87□□□□□ -0.99
Usf3-201ENSMUST00000088356 Pcp4l1Q6W8Q3 68 aa8.87□□□□□ -0.99
Usf3-201ENSMUST00000088356 Gm5868Q8BJG1 145 aa8.85□□□□□ -0.99
Usf3-201ENSMUST00000088356 Cox8bP48772 70 aa8.83□□□□□ -1
Usf3-201ENSMUST00000088356 Dnal4Q9DCM4 105 aa8.83□□□□□ -1
Usf3-201ENSMUST00000088356 Ighv10-1A0A0B4J1J6 119 aa8.82□□□□□ -1
Usf3-201ENSMUST00000088356 Trav4d-3A0A075B625 110 aa8.8□□□□□ -1
Usf3-201ENSMUST00000088356 P06320 134 aa8.8□□□□□ -1
Usf3-201ENSMUST00000088356 Eif4ebp3Q80VV3 101 aa8.8□□□□□ -1
Usf3-201ENSMUST00000088356 Cend1Q9JKC6 149 aa8.8□□□□□ -1
Usf3-201ENSMUST00000088356 Cypt15B1AXS0 87 aa8.79□□□□□ -1
Usf3-201ENSMUST00000088356 7530416G11RikJ3QJX6 159 aa8.79□□□□□ -1
Usf3-201ENSMUST00000088356 Trappc1Q5NCF2 145 aa8.79□□□□□ -1
Usf3-201ENSMUST00000088356 Plscr4P58196 326 aa8.78□□□□□ -1
Usf3-201ENSMUST00000088356 SelenowP63300 88 aa8.78□□□□□ -1
Usf3-201ENSMUST00000088356 Gm20458E9PXJ7 78 aa8.77□□□□□ -1.01
Usf3-201ENSMUST00000088356 Chchd10Q7TNL9 138 aa8.77□□□□□ -1.01
Usf3-201ENSMUST00000088356 Trav4n-4A0A075B615 110 aa8.76□□□□□ -1.01
Usf3-201ENSMUST00000088356 Gm9376G3UW68 176 aa8.76□□□□□ -1.01
Usf3-201ENSMUST00000088356 Pam16Q9CQV1 125 aa8.76□□□□□ -1.01
Usf3-201ENSMUST00000088356 Dpm2Q9Z324 84 aa8.76□□□□□ -1.01
Usf3-201ENSMUST00000088356 Rnase13Q5GAM7 153 aa8.75□□□□□ -1.01
Usf3-201ENSMUST00000088356 Fsip2A2ARZ3 6995 aa8.73□□□□□ -1.01
Usf3-201ENSMUST00000088356 Gm10295Q8CCF3 114 aa8.73□□□□□ -1.01
Usf3-201ENSMUST00000088356 Krtap9-5A2A5X3 358 aa8.72□□□□□ -1.01
Usf3-201ENSMUST00000088356 Chtf8P0CG14 533 aa8.72□□□□□ -1.01
Usf3-201ENSMUST00000088356 Gm10604Q3V0X7 143 aa8.72□□□□□ -1.01
Usf3-201ENSMUST00000088356 Hist2h2beQ64524 126 aa8.72□□□□□ -1.01
Usf3-201ENSMUST00000088356 Rpl39lQ9CQD0 51 aa8.72□□□□□ -1.01
Usf3-201ENSMUST00000088356 Smim26Q3V460 107 aa8.7□□□□□ -1.02
Usf3-201ENSMUST00000088356 Krtap4-9B1AQA9 244 aa8.68□□□□□ -1.02
Usf3-201ENSMUST00000088356 Krtap19-2Q925I0 141 aa8.68□□□□□ -1.02
Usf3-201ENSMUST00000088356 Igkv3-3A0A140T8Q0 119 aa8.67□□□□□ -1.02
Usf3-201ENSMUST00000088356 Igkv8-19A0A0G2JFN8 121 aa8.65□□□□□ -1.02
Usf3-201ENSMUST00000088356 Sigmar1O55242 223 aa8.64□□□□□ -1.03
Usf3-201ENSMUST00000088356 Igkv2-109A0A075B5K6 120 aa8.63□□□□□ -1.03
Usf3-201ENSMUST00000088356 Ighv10-3A0A075B5T6 119 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms