RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gm12353A2AGJ4 60 aa7.47□□□□□ -1.21
Topbp1-201ENSMUST00000035164 H2al1kJ3QP08 105 aa7.47□□□□□ -1.21
Topbp1-201ENSMUST00000035164 H2al1eQ810S6 105 aa7.47□□□□□ -1.21
Topbp1-201ENSMUST00000035164 H2al1mQ9DAD9 105 aa7.47□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Sprr4Q8CGN8 76 aa7.46□□□□□ -1.21
Topbp1-201ENSMUST00000035164 SptssbQ925E8 76 aa7.46□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Igkv3-12A0A140T8P0 119 aa7.45□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Igkv3-4A0A140T8Q4 119 aa7.45□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Rpl37aP61514 92 aa7.45□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Ube2aQ9Z255 152 aa7.45□□□□□ -1.22
Topbp1-201ENSMUST00000035164 TgO08710 2766 aa7.44□□□□□ -1.22
Topbp1-201ENSMUST00000035164 AI606181Q8C7B9 129 aa7.44□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Cdc42se1Q8BHL7 80 aa7.43□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Psors1c2Q80ZC9 134 aa7.43□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Coa5Q99M07 74 aa7.42□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Gm28230A0A0A0MQ91 144 aa7.41□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Gm7138L7N2C3 230 aa7.41□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Gm3238W4VSP7 230 aa7.41□□□□□ -1.22
Topbp1-201ENSMUST00000035164 9530053A07RikE9PVG8 2581 aa7.4□□□□□ -1.22
Topbp1-201ENSMUST00000035164 Dmac1Q9CQ00 111 aa7.39□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Sec61gP60060 68 aa7.39□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Igkv3-7A0A0G2JE31 119 aa7.38□□□□□ -1.23
Topbp1-201ENSMUST00000035164 SycnQ8VCK7 134 aa7.38□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Igkv3-5A0A140T8M6 119 aa7.37□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Ndufs5Q99LY9 106 aa7.37□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Srrm2Q8BTI8 2703 aaKnown RBP7.37□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Sox16Q62247 57 aa7.35□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Gm7137J3QMW1 236 aa7.35□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Wfdc6bF6ULY1 148 aa7.34□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Igkv3-10A0A0G2JGN0 119 aa7.34□□□□□ -1.23
Topbp1-201ENSMUST00000035164 Wfdc10Q3V2J9 124 aa7.33□□□□□ -1.24
Topbp1-201ENSMUST00000035164 1700012A03RikQ9DAF1 130 aa7.33□□□□□ -1.24
Topbp1-201ENSMUST00000035164 P84750 121 aa7.33□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Gm7276Q3TYW4 209 aa7.32□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Gm11565A2A4M7 156 aa7.31□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Gm11627A6PWP4 55 aa7.31□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Tenm1Q9WTS4 2731 aa7.3□□□□□ -1.24
Topbp1-201ENSMUST00000035164 A930002H24RikQ8C8Y3 163 aa7.3□□□□□ -1.24
Topbp1-201ENSMUST00000035164 AplnQ9R0R4 77 aa7.3□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Xirp2Q4U4S6 3784 aa7.28□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Chtf8P0CG14 533 aa7.28□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Fbn1Q61554 2873 aaKnown RBP7.28□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Gm10160F6Y577 67 aa7.27□□□□□ -1.24
Topbp1-201ENSMUST00000035164 Defb13Q8R2I4 64 aa7.27□□□□□ -1.25
Topbp1-201ENSMUST00000035164 VwfQ8CIZ8 2813 aa7.27□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Phf5aP83870 110 aaKnown RBP7.26□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Phxr4P15974 95 aa7.25□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Gm16181B0V2H2 73 aa7.25□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Zcchc13Q9D548 170 aa7.24□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Gm4707V9GXN5 68 aa7.23□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Prol1E9PYQ4 312 aa7.23□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Spata3Q9D9T6 193 aa7.22□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Wfdc3Q14AE4 130 aa7.21□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Nupr2Q497P3 102 aa7.21□□□□□ -1.25
Topbp1-201ENSMUST00000035164 Gm20661K7N787 53 aa7.19□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Gm10642Q3TWM1 71 aa7.19□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Gm10837Q3UTT8 145 aa7.19□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Chchd10Q7TNL9 138 aa7.19□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Igkv3-3A0A140T8Q0 119 aa7.18□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Gm20604F8WIA3 75 aa7.18□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Hspg2Q05793 3707 aaKnown RBP7.18□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Gm9508A0A1W2P7W0 230 aa7.17□□□□□ -1.26
Topbp1-201ENSMUST00000035164 Ndufb1P0DN34 57 aa7.17□□□□□ -1.26
Topbp1-201ENSMUST00000035164 BsnO88737 3942 aa7.16□□□□□ -1.26
Topbp1-201ENSMUST00000035164 U90926O08546 118 aa7.15□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Anapc11Q9CPX9 84 aa7.14□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Fam104aA2A6P4 185 aa7.12□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Tenm4Q3UHK6 2771 aa7.12□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Phxr5P08399 672 aa7.12□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Adm2Q7TNK8 150 aa7.11□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Defb39Q70KL3 74 aa7.11□□□□□ -1.27
Topbp1-201ENSMUST00000035164 1600014C23RikQ9DAX4 101 aa7.1□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Ank2Q8C8R3 3898 aa7.1□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Gm36176A0A1W2P8D5 158 aa7.09□□□□□ -1.27
Topbp1-201ENSMUST00000035164 Col7a1Q63870 2944 aa7.08□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Sprr1aQ62266 144 aa7.07□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Odf3bQ5M8M2 238 aa7.06□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Defb9Q8R2I6 67 aa7.06□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Wfdc17Q5SSJ1 76 aa7.05□□□□□ -1.28
Topbp1-201ENSMUST00000035164 4933415A04RikQ9D443 101 aa7.05□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Defb1P56386 69 aa7.05□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Plac8Q9JI48 112 aa7.04□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Q8K1L6 76 aa7.03□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Gm10999F6Q4M4 69 aa7.03□□□□□ -1.28
Topbp1-201ENSMUST00000035164 Gm37013Q8K491 104 aa7□□□□□ -1.29
Topbp1-201ENSMUST00000035164 Gm27235Q3UW50 83 aa6.99□□□□□ -1.29
Topbp1-201ENSMUST00000035164 Spaca4Q80ZQ0 127 aa6.98□□□□□ -1.29
Topbp1-201ENSMUST00000035164 Gm10139O88245 57 aa6.97□□□□□ -1.29
Topbp1-201ENSMUST00000035164 Gm3646F6S692 53 aa6.96□□□□□ -1.29
Topbp1-201ENSMUST00000035164 Gm21798J3QNU5 87 aa6.94□□□□□ -1.3
Topbp1-201ENSMUST00000035164 FcgbpE9Q0B5 2583 aa6.94□□□□□ -1.3
Topbp1-201ENSMUST00000035164 Znf706Q9D115 76 aaKnown RBP6.94□□□□□ -1.3
Topbp1-201ENSMUST00000035164 Limd2Q8BGB5 128 aa6.94□□□□□ -1.3
Topbp1-201ENSMUST00000035164 Q8BGJ3 129 aa6.92□□□□□ -1.3
Topbp1-201ENSMUST00000035164 6030445D17RikE9Q8F9 148 aa6.91□□□□□ -1.3
Topbp1-201ENSMUST00000035164 Ccdc179J3QM76 67 aa6.91□□□□□ -1.3
Topbp1-201ENSMUST00000035164 Gm26620Q9CY65 116 aa6.9□□□□□ -1.3
Topbp1-201ENSMUST00000035164 1700042G07RikB1AUF7 90 aa6.9□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Gm10643Q3URG9 111 aa6.9□□□□□ -1.31
Topbp1-201ENSMUST00000035164 Tenm2Q9WTS5 2764 aa6.89□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms