RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Gm11213A0A1B0GR83 88 aa8.74□□□□□ -1.01
Notch1-201ENSMUST00000028288 Igsf10Q3V1M1 2594 aa8.74□□□□□ -1.01
Notch1-201ENSMUST00000028288 Col12a1Q60847 3120 aa8.72□□□□□ -1.01
Notch1-201ENSMUST00000028288 Ubr5Q80TP3 2792 aa8.69□□□□□ -1.02
Notch1-201ENSMUST00000028288 CnbpP53996 178 aaKnown RBP8.68□□□□□ -1.02
Notch1-201ENSMUST00000028288 Vps13aQ5H8C4 3166 aa8.67□□□□□ -1.02
Notch1-201ENSMUST00000028288 Fam104aA2A6P4 185 aa8.67□□□□□ -1.02
Notch1-201ENSMUST00000028288 Zcchc13Q9D548 170 aa8.67□□□□□ -1.02
Notch1-201ENSMUST00000028288 Plac8Q9JI48 112 aa8.67□□□□□ -1.02
Notch1-201ENSMUST00000028288 Muc2Q80Z19 2680 aa8.66□□□□□ -1.02
Notch1-201ENSMUST00000028288 Itpr2Q9Z329 2701 aa8.66□□□□□ -1.02
Notch1-201ENSMUST00000028288 Gm3233E9Q2H5 230 aa8.62□□□□□ -1.03
Notch1-201ENSMUST00000028288 Cdh23Q99PF4 3354 aa8.62□□□□□ -1.03
Notch1-201ENSMUST00000028288 2310034C09RikQ9D746 214 aa8.62□□□□□ -1.03
Notch1-201ENSMUST00000028288 9530053A07RikE9PVG8 2581 aa8.62□□□□□ -1.03
Notch1-201ENSMUST00000028288 Gm21798J3QNU5 87 aa8.62□□□□□ -1.03
Notch1-201ENSMUST00000028288 HttP42859 3119 aa8.6□□□□□ -1.03
Notch1-201ENSMUST00000028288 Gm20538F6Z9R1 75 aa8.6□□□□□ -1.03
Notch1-201ENSMUST00000028288 Gm26620Q9CY65 116 aa8.6□□□□□ -1.03
Notch1-201ENSMUST00000028288 ApcQ61315 2845 aa8.58□□□□□ -1.04
Notch1-201ENSMUST00000028288 Utp20Q5XG71 2788 aaKnown RBP8.57□□□□□ -1.04
Notch1-201ENSMUST00000028288 Myo15bI7HPW8 3033 aa8.57□□□□□ -1.04
Notch1-201ENSMUST00000028288 Pkd1l1Q8R526 2615 aa8.57□□□□□ -1.04
Notch1-201ENSMUST00000028288 Stab2Q8R4U0 2559 aa8.57□□□□□ -1.04
Notch1-201ENSMUST00000028288 Smim29Q8R043 75 aa8.56□□□□□ -1.04
Notch1-201ENSMUST00000028288 6030445D17RikE9Q8F9 148 aa8.55□□□□□ -1.04
Notch1-201ENSMUST00000028288 Pla2g10Q9QXX3 151 aa8.55□□□□□ -1.04
Notch1-201ENSMUST00000028288 CriptO70333 101 aa8.53□□□□□ -1.04
Notch1-201ENSMUST00000028288 Cfap54Q8C6S9 3106 aa8.53□□□□□ -1.04
Notch1-201ENSMUST00000028288 Gm3880A0A1B0GSB3 72 aa8.53□□□□□ -1.04
Notch1-201ENSMUST00000028288 DspE9Q557 2883 aaKnown RBP8.52□□□□□ -1.05
Notch1-201ENSMUST00000028288 AtmQ62388 3066 aa8.5□□□□□ -1.05
Notch1-201ENSMUST00000028288 Cypt14J3QPF7 87 aa8.5□□□□□ -1.05
Notch1-201ENSMUST00000028288 Lelp1Q9DAE3 120 aa8.47□□□□□ -1.05
Notch1-201ENSMUST00000028288 Gm10320E9PW43 113 aa8.47□□□□□ -1.05
Notch1-201ENSMUST00000028288 Gm9955Q8CEJ8 102 aa8.46□□□□□ -1.06
Notch1-201ENSMUST00000028288 FryE9Q8I9 3020 aa8.46□□□□□ -1.06
Notch1-201ENSMUST00000028288 NbdyA0A0N4SUI7 68 aa8.46□□□□□ -1.06
Notch1-201ENSMUST00000028288 FrylF8VQ05 3007 aa8.45□□□□□ -1.06
Notch1-201ENSMUST00000028288 OxtP35454 125 aa8.45□□□□□ -1.06
Notch1-201ENSMUST00000028288 Gm7138L7N2C3 230 aa8.43□□□□□ -1.06
Notch1-201ENSMUST00000028288 Cystm1Q8K353 104 aa8.43□□□□□ -1.06
Notch1-201ENSMUST00000028288 Gm3238W4VSP7 230 aa8.43□□□□□ -1.06
Notch1-201ENSMUST00000028288 Hivep1Q03172 2688 aa8.43□□□□□ -1.06
Notch1-201ENSMUST00000028288 Gm10065F6TJM2 114 aa8.43□□□□□ -1.06
Notch1-201ENSMUST00000028288 Gm4491E0CX42 125 aa8.41□□□□□ -1.06
Notch1-201ENSMUST00000028288 Gm9821Q8K076 103 aa8.4□□□□□ -1.06
Notch1-201ENSMUST00000028288 Tex15F8VPN2 2785 aa8.4□□□□□ -1.07
Notch1-201ENSMUST00000028288 BptfA2A654 3036 aaKnown RBP8.38□□□□□ -1.07
Notch1-201ENSMUST00000028288 Odf3bQ5M8M2 238 aa8.38□□□□□ -1.07
Notch1-201ENSMUST00000028288 Spink7Q6IE32 76 aa8.36□□□□□ -1.07
Notch1-201ENSMUST00000028288 Gm7137J3QMW1 236 aa8.35□□□□□ -1.07
Notch1-201ENSMUST00000028288 Gm10139O88245 57 aa8.35□□□□□ -1.07
Notch1-201ENSMUST00000028288 Celsr1O35161 3034 aa8.34□□□□□ -1.07
Notch1-201ENSMUST00000028288 Celsr3Q91ZI0 3301 aa8.34□□□□□ -1.07
Notch1-201ENSMUST00000028288 Zfhx3Q61329 3726 aa8.32□□□□□ -1.08
Notch1-201ENSMUST00000028288 AspmQ8CJ27 3122 aa8.31□□□□□ -1.08
Notch1-201ENSMUST00000028288 NbeaQ9EPN1 2936 aa8.31□□□□□ -1.08
Notch1-201ENSMUST00000028288 Gm37013Q8K491 104 aa8.29□□□□□ -1.08
Notch1-201ENSMUST00000028288 FlncQ8VHX6 2726 aaKnown RBP8.29□□□□□ -1.08
Notch1-201ENSMUST00000028288 Igfn1Q3KNY0 2849 aa8.29□□□□□ -1.08
Notch1-201ENSMUST00000028288 Gm11565A2A4M7 156 aa8.27□□□□□ -1.09
Notch1-201ENSMUST00000028288 Sprr1aQ62266 144 aa8.27□□□□□ -1.09
Notch1-201ENSMUST00000028288 Srrm2Q8BTI8 2703 aaKnown RBP8.25□□□□□ -1.09
Notch1-201ENSMUST00000028288 Unc80Q8BLN6 3261 aa8.24□□□□□ -1.09
Notch1-201ENSMUST00000028288 Gm3646F6S692 53 aa8.24□□□□□ -1.09
Notch1-201ENSMUST00000028288 Szt2A2A9C3 3431 aa8.23□□□□□ -1.09
Notch1-201ENSMUST00000028288 A730071L15RikQ8C4X0 137 aa8.23□□□□□ -1.09
Notch1-201ENSMUST00000028288 Frem2Q6NVD0 3160 aa8.23□□□□□ -1.09
Notch1-201ENSMUST00000028288 Zzef1Q5SSH7 2924 aa8.23□□□□□ -1.09
Notch1-201ENSMUST00000028288 Gm9508A0A1W2P7W0 230 aa8.21□□□□□ -1.09
Notch1-201ENSMUST00000028288 Krtap15-1Q9QZU5 150 aa8.2□□□□□ -1.1
Notch1-201ENSMUST00000028288 Lama1P19137 3084 aa8.2□□□□□ -1.1
Notch1-201ENSMUST00000028288 Vps13cQ8BX70 3748 aa8.16□□□□□ -1.1
Notch1-201ENSMUST00000028288 TgO08710 2766 aa8.13□□□□□ -1.11
Notch1-201ENSMUST00000028288 Gm16253D3Z167 63 aa8.13□□□□□ -1.11
Notch1-201ENSMUST00000028288 Wdfy4E9Q2M9 3149 aa8.12□□□□□ -1.11
Notch1-201ENSMUST00000028288 Gm36176A0A1W2P8D5 158 aa8.12□□□□□ -1.11
Notch1-201ENSMUST00000028288 Celsr2Q9R0M0 2920 aa8.11□□□□□ -1.11
Notch1-201ENSMUST00000028288 Adgrg4B7ZCC9 3073 aa8.1□□□□□ -1.11
Notch1-201ENSMUST00000028288 Gm17349F7BGH6 99 aa8.09□□□□□ -1.11
Notch1-201ENSMUST00000028288 Lrrc37aB1AWG4 3215 aa8.09□□□□□ -1.11
Notch1-201ENSMUST00000028288 Krtap29-1A2A5X4 342 aa8.09□□□□□ -1.12
Notch1-201ENSMUST00000028288 Camk2n1Q6QWF9 78 aa8.06□□□□□ -1.12
Notch1-201ENSMUST00000028288 Nf1Q04690 2841 aa8.06□□□□□ -1.12
Notch1-201ENSMUST00000028288 Dmxl2Q8BPN8 3032 aa8.06□□□□□ -1.12
Notch1-201ENSMUST00000028288 Trank1Q8BV79 2999 aa8.03□□□□□ -1.12
Notch1-201ENSMUST00000028288 Brca2P97929 3329 aa8.02□□□□□ -1.12
Notch1-201ENSMUST00000028288 Romo1P60603 79 aa8.02□□□□□ -1.13
Notch1-201ENSMUST00000028288 LrbaQ9ESE1 2856 aa8□□□□□ -1.13
Notch1-201ENSMUST00000028288 Pdzd2E9Q1M1 2796 aa8□□□□□ -1.13
Notch1-201ENSMUST00000028288 Chd9Q8BYH8 2885 aa8□□□□□ -1.13
Notch1-201ENSMUST00000028288 4933415A04RikQ9D443 101 aa8□□□□□ -1.13
Notch1-201ENSMUST00000028288 FcgbpE9Q0B5 2583 aa7.99□□□□□ -1.13
Notch1-201ENSMUST00000028288 1700042G07RikB1AUF7 90 aa7.99□□□□□ -1.13
Notch1-201ENSMUST00000028288 Col6a3E9PWQ3 3284 aa7.97□□□□□ -1.13
Notch1-201ENSMUST00000028288 Rpl37Q9D823 97 aa7.97□□□□□ -1.13
Notch1-201ENSMUST00000028288 Akap9Q70FJ1 3797 aa7.94□□□□□ -1.14
Notch1-201ENSMUST00000028288 Gm5767A0A0J9YTU8 78 aa7.93□□□□□ -1.14
Notch1-201ENSMUST00000028288 Fam229aB2KGE5 128 aa7.93□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms