RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Nav3Q80TN7 2359 aa7.81□□□□□ -1.16
Scn8a-208ENSMUST00000200963 Ankhd1E9PUR0 2548 aaKnown RBP7.79□□□□□ -1.16
Scn8a-208ENSMUST00000200963 Notch2O35516 2470 aa7.78□□□□□ -1.16
Scn8a-208ENSMUST00000200963 AY074887Q8R5F9 132 aa7.77□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Phxr4P15974 95 aa7.76□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Eif4ebp3Q80VV3 101 aa7.76□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Pla2g10Q9QXX3 151 aa7.76□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Defb9Q8R2I6 67 aa7.75□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Cypt15B1AXS0 87 aa7.74□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Uqcr11Q9CPX8 56 aa7.74□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Ttc28Q80XJ3 2450 aa7.74□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Anapc11Q9CPX9 84 aa7.73□□□□□ -1.17
Scn8a-208ENSMUST00000200963 A330070K13RikQ8CA53 115 aa7.73□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Sprr1bQ62267 153 aa7.73□□□□□ -1.17
Scn8a-208ENSMUST00000200963 Hcfc1Q61191 2045 aaKnown RBP7.72□□□□□ -1.17
Scn8a-208ENSMUST00000200963 C530025M09RikF6RGA8 229 aa7.7□□□□□ -1.18
Scn8a-208ENSMUST00000200963 AW011738F6S7Q2 159 aa7.69□□□□□ -1.18
Scn8a-208ENSMUST00000200963 Gm7276Q3TYW4 209 aa7.69□□□□□ -1.18
Scn8a-208ENSMUST00000200963 Plac8Q9JI48 112 aa7.69□□□□□ -1.18
Scn8a-208ENSMUST00000200963 Tln1P26039 2541 aaKnown RBP7.66□□□□□ -1.18
Scn8a-208ENSMUST00000200963 Lypd5Q9D7Z7 256 aa7.66□□□□□ -1.18
Scn8a-208ENSMUST00000200963 Piezo2Q8CD54 2822 aa7.65□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Gm26620Q9CY65 116 aa7.63□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Gm3233E9Q2H5 230 aa7.63□□□□□ -1.19
Scn8a-208ENSMUST00000200963 OxtP35454 125 aa7.62□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Hivep3A2A884 2348 aa7.62□□□□□ -1.19
Scn8a-208ENSMUST00000200963 CriptO70333 101 aa7.62□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Piezo1E2JF22 2547 aa7.61□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Chtf8P0CG14 533 aa7.61□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Gm11213A0A1B0GR83 88 aa7.61□□□□□ -1.19
Scn8a-208ENSMUST00000200963 PtprqP0C5E4 2300 aa7.61□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Gm10643Q3URG9 111 aa7.6□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Sptbn4E9PX29 2561 aa7.6□□□□□ -1.19
Scn8a-208ENSMUST00000200963 Gm21798J3QNU5 87 aa7.58□□□□□ -1.2
Scn8a-208ENSMUST00000200963 Fam104aA2A6P4 185 aa7.58□□□□□ -1.2
Scn8a-208ENSMUST00000200963 2310034C09RikQ9D746 214 aa7.58□□□□□ -1.2
Scn8a-208ENSMUST00000200963 CnbpP53996 178 aaKnown RBP7.55□□□□□ -1.2
Scn8a-208ENSMUST00000200963 Fam229bQ8CF36 80 aa7.54□□□□□ -1.2
Scn8a-208ENSMUST00000200963 Chd8Q09XV5 2582 aaKnown RBP7.54□□□□□ -1.2
Scn8a-208ENSMUST00000200963 Gm9821Q8K076 103 aa7.53□□□□□ -1.2
Scn8a-208ENSMUST00000200963 Zcchc13Q9D548 170 aa7.53□□□□□ -1.2
Scn8a-208ENSMUST00000200963 Gm3880A0A1B0GSB3 72 aa7.53□□□□□ -1.2
Scn8a-208ENSMUST00000200963 Spink7Q6IE32 76 aa7.5□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Cypt14J3QPF7 87 aa7.49□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Gm9955Q8CEJ8 102 aa7.49□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Usp9xP70398 2559 aaKnown RBP7.49□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Gm7138L7N2C3 230 aa7.47□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Smim29Q8R043 75 aa7.47□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Gm3238W4VSP7 230 aa7.47□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Zfp462B1AWL2 2495 aaKnown RBP7.47□□□□□ -1.21
Scn8a-208ENSMUST00000200963 Cep192E9Q4Y4 2514 aaKnown RBP7.47□□□□□ -1.21
Scn8a-208ENSMUST00000200963 6030445D17RikE9Q8F9 148 aa7.46□□□□□ -1.22
Scn8a-208ENSMUST00000200963 Gm4491E0CX42 125 aa7.45□□□□□ -1.22
Scn8a-208ENSMUST00000200963 NbdyA0A0N4SUI7 68 aa7.44□□□□□ -1.22
Scn8a-208ENSMUST00000200963 Ptpn13Q64512 2453 aa7.43□□□□□ -1.22
Scn8a-208ENSMUST00000200963 SetxA2AKX3 2646 aa7.42□□□□□ -1.22
Scn8a-208ENSMUST00000200963 SrcapA0A087WQ44 3271 aa7.41□□□□□ -1.22
Scn8a-208ENSMUST00000200963 TrrapQ80YV3 2565 aaKnown RBP7.41□□□□□ -1.22
Scn8a-208ENSMUST00000200963 Gm7137J3QMW1 236 aa7.38□□□□□ -1.23
Scn8a-208ENSMUST00000200963 PolqQ8CGS6 2544 aa7.36□□□□□ -1.23
Scn8a-208ENSMUST00000200963 Gm10065F6TJM2 114 aa7.36□□□□□ -1.23
Scn8a-208ENSMUST00000200963 Epg5Q80TA9 2572 aa7.35□□□□□ -1.23
Scn8a-208ENSMUST00000200963 Krtap15-1Q9QZU5 150 aa7.33□□□□□ -1.24
Scn8a-208ENSMUST00000200963 Bahcc1Q3UHR0 2643 aa7.31□□□□□ -1.24
Scn8a-208ENSMUST00000200963 Gm10320E9PW43 113 aa7.31□□□□□ -1.24
Scn8a-208ENSMUST00000200963 Setd2E9Q5F9 2537 aa7.29□□□□□ -1.24
Scn8a-208ENSMUST00000200963 MtorQ9JLN9 2549 aa7.29□□□□□ -1.24
Scn8a-208ENSMUST00000200963 Lelp1Q9DAE3 120 aa7.28□□□□□ -1.24
Scn8a-208ENSMUST00000200963 Camk2n1Q6QWF9 78 aa7.27□□□□□ -1.25
Scn8a-208ENSMUST00000200963 Odf3bQ5M8M2 238 aa7.26□□□□□ -1.25
Scn8a-208ENSMUST00000200963 Gm9508A0A1W2P7W0 230 aa7.26□□□□□ -1.25
Scn8a-208ENSMUST00000200963 Gm10139O88245 57 aa7.25□□□□□ -1.25
Scn8a-208ENSMUST00000200963 Fam229aB2KGE5 128 aa7.21□□□□□ -1.26
Scn8a-208ENSMUST00000200963 Ankrd17Q99NH0 2603 aaKnown RBP7.2□□□□□ -1.26
Scn8a-208ENSMUST00000200963 Gm37013Q8K491 104 aa7.17□□□□□ -1.26
Scn8a-208ENSMUST00000200963 CicQ924A2 2510 aa7.16□□□□□ -1.26
Scn8a-208ENSMUST00000200963 Gm17349F7BGH6 99 aa7.16□□□□□ -1.26
Scn8a-208ENSMUST00000200963 Cystm1Q8K353 104 aa7.15□□□□□ -1.26
Scn8a-208ENSMUST00000200963 Sprr1aQ62266 144 aa7.15□□□□□ -1.27
Scn8a-208ENSMUST00000200963 Gm11565A2A4M7 156 aa7.11□□□□□ -1.27
Scn8a-208ENSMUST00000200963 Nbeal1E9PYP2 2688 aa7.11□□□□□ -1.27
Scn8a-208ENSMUST00000200963 Gm16253D3Z167 63 aa7.1□□□□□ -1.27
Scn8a-208ENSMUST00000200963 Abca12E9Q876 2595 aa7.1□□□□□ -1.27
Scn8a-208ENSMUST00000200963 Gm3646F6S692 53 aa7.1□□□□□ -1.27
Scn8a-208ENSMUST00000200963 Gm36176A0A1W2P8D5 158 aa7.09□□□□□ -1.27
Scn8a-208ENSMUST00000200963 Sec61bQ9CQS8 96 aaKnown RBP7.08□□□□□ -1.28
Scn8a-208ENSMUST00000200963 Unc79Q0KK59 2596 aa7.08□□□□□ -1.28
Scn8a-208ENSMUST00000200963 Usp9yF8VPU6 2556 aa7.08□□□□□ -1.28
Scn8a-208ENSMUST00000200963 Nsd1O88491 2588 aaKnown RBP7.07□□□□□ -1.28
Scn8a-208ENSMUST00000200963 Dmbt1Q60997 2085 aa7.05□□□□□ -1.28
Scn8a-208ENSMUST00000200963 Romo1P60603 79 aa7.05□□□□□ -1.28
Scn8a-208ENSMUST00000200963 Rpl37Q9D823 97 aa7.04□□□□□ -1.28
Scn8a-208ENSMUST00000200963 A730071L15RikQ8C4X0 137 aa7.03□□□□□ -1.28
Scn8a-208ENSMUST00000200963 Gm5767A0A0J9YTU8 78 aa7.02□□□□□ -1.29
Scn8a-208ENSMUST00000200963 Krtap29-1A2A5X4 342 aa7.01□□□□□ -1.29
Scn8a-208ENSMUST00000200963 Gm19426M0QWC7 77 aa7□□□□□ -1.29
Scn8a-208ENSMUST00000200963 Zfp292Q9Z2U2 2698 aa6.97□□□□□ -1.29
Scn8a-208ENSMUST00000200963 BC029722A0A0N4SW31 51 aa6.97□□□□□ -1.29
Scn8a-208ENSMUST00000200963 Gm10382Q3V0T5 144 aa6.95□□□□□ -1.3
Scn8a-208ENSMUST00000200963 Myo18bE9PV66 2605 aa6.94□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 69.7 ms