RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Stab1Q8R4Y4 2571 aa10.31□□□□□ -0.76
Sdc1-205ENSMUST00000171158 Defa2P28309 93 aa10.31□□□□□ -0.76
Sdc1-205ENSMUST00000171158 BC048502Q80Y74 154 aa10.31□□□□□ -0.76
Sdc1-205ENSMUST00000171158 Cd164Q9R0L9 197 aa10.31□□□□□ -0.76
Sdc1-205ENSMUST00000171158 Ubl5Q9EPV8 73 aa10.3□□□□□ -0.76
Sdc1-205ENSMUST00000171158 D130052B06RikQ3UW13 202 aa10.3□□□□□ -0.76
Sdc1-205ENSMUST00000171158 Cdk2ap2Q9CPY4 127 aa10.3□□□□□ -0.76
Sdc1-205ENSMUST00000171158 Dnah3Q8BW94 4083 aa10.28□□□□□ -0.76
Sdc1-205ENSMUST00000171158 6430550D23RikE9Q1X6 194 aa10.28□□□□□ -0.76
Sdc1-205ENSMUST00000171158 A730071L15RikQ8C4X0 137 aa10.28□□□□□ -0.76
Sdc1-205ENSMUST00000171158 PtprqP0C5E4 2300 aa10.27□□□□□ -0.76
Sdc1-205ENSMUST00000171158 ScxQ64124 207 aa10.27□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Fam19a1Q7TPG8 133 aa10.27□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Gm36176A0A1W2P8D5 158 aa10.27□□□□□ -0.77
Sdc1-205ENSMUST00000171158 MplkipQ9D011 178 aa10.27□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Rbm3O89086 153 aaKnown RBP10.26□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Gm7276Q3TYW4 209 aa10.26□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Fn1P11276 2477 aaKnown RBP10.26□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Serp2Q6TAW2 65 aa10.25□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Defb37Q7TMD2 62 aa10.25□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Notch1Q01705 2531 aa10.25□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Pde6gP09174 87 aa10.24□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Gm3618D3Z4P5 127 aa10.23□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Smim29Q8R043 75 aa10.23□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Gm2916Q9D9B9 127 aa10.23□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Naa38Q9D2U5 125 aa10.23□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Srrm2Q8BTI8 2703 aaKnown RBP10.22□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Gm20726G3UX18 150 aa10.22□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Defa7P50705 93 aa10.22□□□□□ -0.77
Sdc1-205ENSMUST00000171158 4930518I15RikQ3V2W7 57 aa10.22□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Pou2af1Q64693 256 aa10.21□□□□□ -0.77
Sdc1-205ENSMUST00000171158 Hivep1Q03172 2688 aa10.21□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Gm16485Q8C4B7 115 aa10.21□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Igkv8-28A0A0G2JE47 121 aa10.2□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Wfdc17Q5SSJ1 76 aa10.19□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Ighv2-2A0A075B5P8 116 aa10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Gm17689B3GLJ4 109 aa10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Gm7137J3QMW1 236 aa10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 P01821 116 aa10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Vpreb2P13373 142 aa10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Nsd1O88491 2588 aaKnown RBP10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Sprr1aQ62266 144 aa10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Fam229bQ8CF36 80 aa10.18□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Tmem243B2RVB9 118 aa10.17□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Igkv1-110A0A0B4J1I0 119 aa10.17□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Igkv1-122A0A140T8M9 119 aa10.17□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Defa4P28311 92 aa10.16□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Gm11627A6PWP4 55 aa10.16□□□□□ -0.78
Sdc1-205ENSMUST00000171158 Col6a5A6H584 2640 aa10.15□□□□□ -0.78
Sdc1-205ENSMUST00000171158 A830005F24RikQ8BRT5 167 aa10.15□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Defa21Q8C1P2 93 aa10.15□□□□□ -0.79
Sdc1-205ENSMUST00000171158 P84750 121 aa10.14□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Sslp1Q3UN54 99 aa10.14□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Dnah14A0A140LIJ4 4489 aa10.14□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Dmac1Q9CQ00 111 aa10.13□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Dnah17Q69Z23 4481 aa10.12□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Dnah10D3YYQ8 4591 aa10.11□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Fam168bQ80XQ8 194 aa10.11□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Wfdc6bF6ULY1 148 aa10.11□□□□□ -0.79
Sdc1-205ENSMUST00000171158 GhrhP16043 103 aa10.1□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Ndufc1Q9CQY9 76 aa10.1□□□□□ -0.79
Sdc1-205ENSMUST00000171158 A0A286YE02 88 aa10.1□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Dnah6E9Q0B6 4144 aa10.1□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Dnah1E9Q8T7 4250 aa10.09□□□□□ -0.79
Sdc1-205ENSMUST00000171158 Fam19a3Q7TPG6 132 aa10.08□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Sfta2E9PXB6 77 aa10.08□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Sprr2jO70561 109 aa10.08□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Tmem258P61166 79 aa10.08□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Defa23Q5G866 93 aa10.08□□□□□ -0.8
Sdc1-205ENSMUST00000171158 A330070K13RikQ8CA53 115 aa10.08□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Prol1E9PYQ4 312 aa10.07□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Obox2E9PXV9 151 aa10.06□□□□□ -0.8
Sdc1-205ENSMUST00000171158 A930002H24RikQ8C8Y3 163 aa10.06□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Dnah7bL7N1Y0 4068 aa10.05□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Cox6a2P43023 97 aa10.05□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Igkv3-12A0A140T8P0 119 aa10.05□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Igkv3-2A0A075B5P0 119 aa10.04□□□□□ -0.8
Sdc1-205ENSMUST00000171158 B230307C23RikQ8BLB2 64 aa10.04□□□□□ -0.8
Sdc1-205ENSMUST00000171158 P06320 134 aa10.03□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Gm19935A0A1B0GSF9 52 aa10.02□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Fam19a5Q91WE9 132 aa10.02□□□□□ -0.8
Sdc1-205ENSMUST00000171158 Gm11011D3Z3L9 86 aa10.02□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Vpreb1P13372 142 aa10.01□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Gm37389A0A0A6YW05 95 aa10.01□□□□□ -0.81
Sdc1-205ENSMUST00000171158 VwfQ8CIZ8 2813 aa10□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Smlr1J3QMJ4 66 aa9.99□□□□□ -0.81
Sdc1-205ENSMUST00000171158 PscaP57096 123 aa9.99□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Rps28P62858 69 aaKnown RBP9.99□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Spata3Q9D9T6 193 aa9.99□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Vpreb3D3Z6J4 130 aa9.99□□□□□ -0.81
Sdc1-205ENSMUST00000171158 BaalcQ8VHV1 145 aa9.99□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Defb10Q8R2I8 73 aa9.98□□□□□ -0.81
Sdc1-205ENSMUST00000171158 BikO70337 150 aa9.98□□□□□ -0.81
Sdc1-205ENSMUST00000171158 AW011738F6S7Q2 159 aa9.97□□□□□ -0.81
Sdc1-205ENSMUST00000171158 2310061N02RikQ9D6S9 174 aa9.97□□□□□ -0.81
Sdc1-205ENSMUST00000171158 Gm10401E9Q3K6 71 aa9.95□□□□□ -0.82
Sdc1-205ENSMUST00000171158 U90926O08546 118 aa9.95□□□□□ -0.82
Sdc1-205ENSMUST00000171158 C130032M10RikQ8C888 123 aa9.95□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Fam104aA2A6P4 185 aa9.94□□□□□ -0.82
Sdc1-205ENSMUST00000171158 Ube2bP63147 152 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms