RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Gm3880A0A1B0GSB3 72 aa6.29□□□□□ -1.4
Col6a5-201ENSMUST00000165165 Lrrk2Q5S006 2527 aa6.28□□□□□ -1.4
Col6a5-201ENSMUST00000165165 Gm21798J3QNU5 87 aa6.28□□□□□ -1.4
Col6a5-201ENSMUST00000165165 Gm10837Q3UTT8 145 aa6.26□□□□□ -1.41
Col6a5-201ENSMUST00000165165 Col4a2P08122 1707 aa6.26□□□□□ -1.41
Col6a5-201ENSMUST00000165165 Gm9955Q8CEJ8 102 aa6.24□□□□□ -1.41
Col6a5-201ENSMUST00000165165 Ankhd1E9PUR0 2548 aaKnown RBP6.22□□□□□ -1.41
Col6a5-201ENSMUST00000165165 2310034C09RikQ9D746 214 aa6.21□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Gm11213A0A1B0GR83 88 aa6.21□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Cypt15B1AXS0 87 aa6.2□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Lypd5Q9D7Z7 256 aa6.19□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Krtap11-1E9Q2E9 183 aa6.18□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Chtf8P0CG14 533 aa6.17□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Gm10772F7AIG4 85 aa6.17□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Zfyve26Q5DU37 2529 aa6.17□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Psors1c2Q80ZC9 134 aa6.17□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Gm9821Q8K076 103 aa6.17□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Gm26620Q9CY65 116 aa6.16□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Jbts17Q8CE72 3214 aa6.15□□□□□ -1.42
Col6a5-201ENSMUST00000165165 A330070K13RikQ8CA53 115 aa6.15□□□□□ -1.42
Col6a5-201ENSMUST00000165165 Gm7276Q3TYW4 209 aa6.14□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Cep192E9Q4Y4 2514 aaKnown RBP6.14□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Sptbn4E9PX29 2561 aa6.14□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Sprr4Q8CGN8 76 aa6.13□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Defb9Q8R2I6 67 aa6.12□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Golgb1E9PVZ8 3238 aa6.12□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Camk2n1Q6QWF9 78 aa6.12□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Anapc11Q9CPX9 84 aa6.12□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Setd2E9Q5F9 2537 aa6.11□□□□□ -1.43
Col6a5-201ENSMUST00000165165 AY074887Q8R5F9 132 aa6.1□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Spata3Q9D9T6 193 aa6.1□□□□□ -1.43
Col6a5-201ENSMUST00000165165 1810062G17RikG3X8Y2 129 aa6.09□□□□□ -1.43
Col6a5-201ENSMUST00000165165 Tln1P26039 2541 aaKnown RBP6.09□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Ttc28Q80XJ3 2450 aa6.08□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Notch2O35516 2470 aa6.08□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Krtap24-1G3X9A2 248 aa6.08□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Epg5Q80TA9 2572 aa6.08□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Eif4ebp3Q80VV3 101 aa6.07□□□□□ -1.44
Col6a5-201ENSMUST00000165165 6030445D17RikE9Q8F9 148 aa6.06□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Sprr1bQ62267 153 aa6.05□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Gm4491E0CX42 125 aa6.05□□□□□ -1.44
Col6a5-201ENSMUST00000165165 CnbpP53996 178 aaKnown RBP6.05□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Kmt2bO08550 2713 aa6.04□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Piezo2Q8CD54 2822 aa6.03□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Fam229bQ8CF36 80 aa6.03□□□□□ -1.44
Col6a5-201ENSMUST00000165165 Ankrd17Q99NH0 2603 aaKnown RBP6.02□□□□□ -1.45
Col6a5-201ENSMUST00000165165 C530025M09RikF6RGA8 229 aa6.01□□□□□ -1.45
Col6a5-201ENSMUST00000165165 AW011738F6S7Q2 159 aa6□□□□□ -1.45
Col6a5-201ENSMUST00000165165 HrnrQ8VHD8 2496 aa5.99□□□□□ -1.45
Col6a5-201ENSMUST00000165165 MtorQ9JLN9 2549 aa5.99□□□□□ -1.45
Col6a5-201ENSMUST00000165165 Krtap26-1Q9D7N2 215 aa5.97□□□□□ -1.45
Col6a5-201ENSMUST00000165165 Piezo1E2JF22 2547 aa5.97□□□□□ -1.45
Col6a5-201ENSMUST00000165165 SrcapA0A087WQ44 3271 aa5.96□□□□□ -1.46
Col6a5-201ENSMUST00000165165 Fam104aA2A6P4 185 aa5.95□□□□□ -1.46
Col6a5-201ENSMUST00000165165 OxtP35454 125 aa5.95□□□□□ -1.46
Col6a5-201ENSMUST00000165165 Romo1P60603 79 aa5.94□□□□□ -1.46
Col6a5-201ENSMUST00000165165 UtrnE9Q6R7 3430 aa5.94□□□□□ -1.46
Col6a5-201ENSMUST00000165165 Plac8Q9JI48 112 aa5.92□□□□□ -1.46
Col6a5-201ENSMUST00000165165 Cypt14J3QPF7 87 aa5.92□□□□□ -1.46
Col6a5-201ENSMUST00000165165 PcntP48725 2898 aa5.91□□□□□ -1.46
Col6a5-201ENSMUST00000165165 Nbeal1E9PYP2 2688 aa5.9□□□□□ -1.46
Col6a5-201ENSMUST00000165165 Odf3bQ5M8M2 238 aa5.9□□□□□ -1.46
Col6a5-201ENSMUST00000165165 Fam229aB2KGE5 128 aa5.9□□□□□ -1.47
Col6a5-201ENSMUST00000165165 Zcchc13Q9D548 170 aa5.89□□□□□ -1.47
Col6a5-201ENSMUST00000165165 Krtap15-1Q9QZU5 150 aa5.88□□□□□ -1.47
Col6a5-201ENSMUST00000165165 Gm3646F6S692 53 aa5.88□□□□□ -1.47
Col6a5-201ENSMUST00000165165 Gm3250E9Q1M3 230 aa5.87□□□□□ -1.47
Col6a5-201ENSMUST00000165165 Usp24B1AY13 2617 aaKnown RBP5.86□□□□□ -1.47
Col6a5-201ENSMUST00000165165 Rpl37Q9D823 97 aa5.84□□□□□ -1.47
Col6a5-201ENSMUST00000165165 Gm10382Q3V0T5 144 aa5.83□□□□□ -1.48
Col6a5-201ENSMUST00000165165 Usp9xP70398 2559 aaKnown RBP5.83□□□□□ -1.48
Col6a5-201ENSMUST00000165165 NbdyA0A0N4SUI7 68 aa5.81□□□□□ -1.48
Col6a5-201ENSMUST00000165165 Smim29Q8R043 75 aa5.81□□□□□ -1.48
Col6a5-201ENSMUST00000165165 Gm37013Q8K491 104 aa5.79□□□□□ -1.48
Col6a5-201ENSMUST00000165165 Gm3285A0A1W2P7U0 201 aa5.78□□□□□ -1.48
Col6a5-201ENSMUST00000165165 Chd8Q09XV5 2582 aaKnown RBP5.78□□□□□ -1.48
Col6a5-201ENSMUST00000165165 Gm19426M0QWC7 77 aa5.77□□□□□ -1.49
Col6a5-201ENSMUST00000165165 SetxA2AKX3 2646 aa5.75□□□□□ -1.49
Col6a5-201ENSMUST00000165165 Usp9yF8VPU6 2556 aa5.75□□□□□ -1.49
Col6a5-201ENSMUST00000165165 Nsd1O88491 2588 aaKnown RBP5.75□□□□□ -1.49
Col6a5-201ENSMUST00000165165 Gm10065F6TJM2 114 aa5.72□□□□□ -1.49
Col6a5-201ENSMUST00000165165 FasnP19096 2504 aaKnown RBP5.72□□□□□ -1.49
Col6a5-201ENSMUST00000165165 Notch1Q01705 2531 aa5.72□□□□□ -1.49
Col6a5-201ENSMUST00000165165 TrrapQ80YV3 2565 aaKnown RBP5.71□□□□□ -1.49
Col6a5-201ENSMUST00000165165 Sec61bQ9CQS8 96 aaKnown RBP5.71□□□□□ -1.5
Col6a5-201ENSMUST00000165165 1700042G07RikB1AUF7 90 aa5.71□□□□□ -1.5
Col6a5-201ENSMUST00000165165 BC029722A0A0N4SW31 51 aa5.7□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Gm10320E9PW43 113 aa5.69□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Cystm1Q8K353 104 aa5.67□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Abca12E9Q876 2595 aa5.67□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Gm9195A0A140LHT4 2805 aa5.66□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Dnah12Q3V0Q1 3086 aa5.66□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Gm10139O88245 57 aa5.66□□□□□ -1.5
Col6a5-201ENSMUST00000165165 2310050C09RikG5E8Z3 280 aa5.65□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Ndufaf8A2AMZ4 74 aa5.65□□□□□ -1.5
Col6a5-201ENSMUST00000165165 Ankrd11E9Q4F7 2643 aa5.64□□□□□ -1.51
Col6a5-201ENSMUST00000165165 Mki67E9PVX6 3177 aaKnown RBP5.62□□□□□ -1.51
Col6a5-201ENSMUST00000165165 Prrc2cQ3TLH4 2846 aaKnown RBP5.62□□□□□ -1.51
Col6a5-201ENSMUST00000165165 4933415A04RikQ9D443 101 aa5.61□□□□□ -1.51
Col6a5-201ENSMUST00000165165 Fn1P11276 2477 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 124.5 ms