RNA–Protein interactions for RNA: ENSMUST00000106791.7

Trim3-203, Transcript of Tripartite motif-containing protein 3, mousemouse

TSL 1 (best) BASIC

Gene Trim3, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-203ENSMUST00000106791 Gm28051J3QMA2 81 aa12.63□□□□□ -0.39
Trim3-203ENSMUST00000106791 Cited1P97769 203 aa12.62□□□□□ -0.39
Trim3-203ENSMUST00000106791 Ighv2-2A0A075B5P8 116 aa12.62□□□□□ -0.39
Trim3-203ENSMUST00000106791 Ighv2-5A0A0A6YY69 116 aa12.62□□□□□ -0.39
Trim3-203ENSMUST00000106791 P01821 116 aa12.62□□□□□ -0.39
Trim3-203ENSMUST00000106791 Lgals4Q8K419 326 aa12.62□□□□□ -0.39
Trim3-203ENSMUST00000106791 Defa3P28310 93 aa12.61□□□□□ -0.39
Trim3-203ENSMUST00000106791 Rpl28P41105 137 aaKnown RBP12.61□□□□□ -0.39
Trim3-203ENSMUST00000106791 Gm9805F6YK59 57 aa12.61□□□□□ -0.39
Trim3-203ENSMUST00000106791 Krtap13O88375 197 aa12.61□□□□□ -0.39
Trim3-203ENSMUST00000106791 Mrpl52Q9D0Y8 121 aa12.61□□□□□ -0.39
Trim3-203ENSMUST00000106791 1600014C23RikQ9DAX4 101 aa12.61□□□□□ -0.39
Trim3-203ENSMUST00000106791 Stard9Q80TF6 4561 aa12.6□□□□□ -0.39
Trim3-203ENSMUST00000106791 Defa4P28311 92 aa12.6□□□□□ -0.39
Trim3-203ENSMUST00000106791 Smim29Q8R043 75 aa12.6□□□□□ -0.39
Trim3-203ENSMUST00000106791 Spata45Q9CVW4 97 aa12.6□□□□□ -0.39
Trim3-203ENSMUST00000106791 Ccl25O35903 144 aa12.6□□□□□ -0.39
Trim3-203ENSMUST00000106791 Dmac1Q9CQ00 111 aa12.6□□□□□ -0.39
Trim3-203ENSMUST00000106791 BC048502Q80Y74 154 aa12.59□□□□□ -0.39
Trim3-203ENSMUST00000106791 Defb47Q30KN1 79 aa12.59□□□□□ -0.39
Trim3-203ENSMUST00000106791 Dnal4Q9DCM4 105 aa12.59□□□□□ -0.39
Trim3-203ENSMUST00000106791 Defb9Q8R2I6 67 aa12.58□□□□□ -0.4
Trim3-203ENSMUST00000106791 Gpr15lA0A0B4J1N3 78 aa12.57□□□□□ -0.4
Trim3-203ENSMUST00000106791 Gm5142Q8C5X9 133 aa12.57□□□□□ -0.4
Trim3-203ENSMUST00000106791 Gm10770F7D043 238 aa12.56□□□□□ -0.4
Trim3-203ENSMUST00000106791 MturnQ8CGA4 131 aa12.56□□□□□ -0.4
Trim3-203ENSMUST00000106791 Trav13n-2A0A0G2JF93 110 aa12.56□□□□□ -0.4
Trim3-203ENSMUST00000106791 Phf5aP83870 110 aaKnown RBP12.56□□□□□ -0.4
Trim3-203ENSMUST00000106791 Smim26Q3V460 107 aa12.56□□□□□ -0.4
Trim3-203ENSMUST00000106791 Defb29Q8BGW9 78 aa12.56□□□□□ -0.4
Trim3-203ENSMUST00000106791 2310034G01RikA0A286YDL3 209 aa12.55□□□□□ -0.4
Trim3-203ENSMUST00000106791 Fat1A0A1L1SQU7 4645 aa12.54□□□□□ -0.4
Trim3-203ENSMUST00000106791 Spink13Q3UTS8 97 aa12.53□□□□□ -0.4
Trim3-203ENSMUST00000106791 Cd164Q9R0L9 197 aa12.53□□□□□ -0.4
Trim3-203ENSMUST00000106791 Gm29423A0A087WRM1 55 aa12.52□□□□□ -0.4
Trim3-203ENSMUST00000106791 Defa13P50711 93 aa12.52□□□□□ -0.41
Trim3-203ENSMUST00000106791 CenpwQ3URR0 86 aa12.51□□□□□ -0.41
Trim3-203ENSMUST00000106791 Klk12B2RVZ0 247 aa12.49□□□□□ -0.41
Trim3-203ENSMUST00000106791 Ube2bP63147 152 aa12.49□□□□□ -0.41
Trim3-203ENSMUST00000106791 Gm16381A0A1Y7VKT9 73 aa12.48□□□□□ -0.41
Trim3-203ENSMUST00000106791 Fam104aA2A6P4 185 aa12.48□□□□□ -0.41
Trim3-203ENSMUST00000106791 Gm11011D3Z3L9 86 aa12.48□□□□□ -0.41
Trim3-203ENSMUST00000106791 E130218I03RikA0A0U1RNU5 63 aa12.47□□□□□ -0.41
Trim3-203ENSMUST00000106791 Q9DAA7 145 aa12.46□□□□□ -0.41
Trim3-203ENSMUST00000106791 Pkhd1E9PZ36 4059 aa12.46□□□□□ -0.41
Trim3-203ENSMUST00000106791 NrepQ07475 68 aa12.46□□□□□ -0.42
Trim3-203ENSMUST00000106791 Gm7276Q3TYW4 209 aa12.46□□□□□ -0.42
Trim3-203ENSMUST00000106791 Igkv4-58A0A0G2JGI6 119 aa12.45□□□□□ -0.42
Trim3-203ENSMUST00000106791 Defa7P50705 93 aa12.45□□□□□ -0.42
Trim3-203ENSMUST00000106791 ApobE9Q414 4505 aa12.44□□□□□ -0.42
Trim3-203ENSMUST00000106791 Trav3-4A0A075B654 114 aa12.44□□□□□ -0.42
Trim3-203ENSMUST00000106791 Gm26602M0QWA4 95 aa12.44□□□□□ -0.42
Trim3-203ENSMUST00000106791 Adm2Q7TNK8 150 aa12.44□□□□□ -0.42
Trim3-203ENSMUST00000106791 A330070K13RikQ8CA53 115 aa12.44□□□□□ -0.42
Trim3-203ENSMUST00000106791 Cox6cQ9CPQ1 76 aa12.44□□□□□ -0.42
Trim3-203ENSMUST00000106791 Ighv10-1A0A0B4J1J6 119 aa12.43□□□□□ -0.42
Trim3-203ENSMUST00000106791 NbdyA0A0N4SUI7 68 aa12.43□□□□□ -0.42
Trim3-203ENSMUST00000106791 Gm10320E9PW43 113 aa12.43□□□□□ -0.42
Trim3-203ENSMUST00000106791 6030445D17RikE9Q8F9 148 aa12.43□□□□□ -0.42
Trim3-203ENSMUST00000106791 Elof1P60003 83 aa12.43□□□□□ -0.42
Trim3-203ENSMUST00000106791 Wfdc10Q3V2J9 124 aa12.43□□□□□ -0.42
Trim3-203ENSMUST00000106791 Xlr5cQ9JJR2 179 aa12.43□□□□□ -0.42
Trim3-203ENSMUST00000106791 Gm10135F6TEE5 83 aa12.42□□□□□ -0.42
Trim3-203ENSMUST00000106791 Igkv1-35A0A0G2JDE5 120 aa12.42□□□□□ -0.42
Trim3-203ENSMUST00000106791 Rpl39lQ9CQD0 51 aa12.4□□□□□ -0.42
Trim3-203ENSMUST00000106791 Gm17521F6QAC8 156 aa12.39□□□□□ -0.43
Trim3-203ENSMUST00000106791 Ube2v1Q9CZY3 147 aa12.39□□□□□ -0.43
Trim3-203ENSMUST00000106791 Msrb1Q9JLC3 116 aa12.38□□□□□ -0.43
Trim3-203ENSMUST00000106791 Ryr1E9PZQ0 5035 aa12.37□□□□□ -0.43
Trim3-203ENSMUST00000106791 TeppQ6IMH0 216 aa12.36□□□□□ -0.43
Trim3-203ENSMUST00000106791 SacsQ9JLC8 4582 aa12.35□□□□□ -0.43
Trim3-203ENSMUST00000106791 Tnp2P11378 117 aa12.35□□□□□ -0.43
Trim3-203ENSMUST00000106791 Gm10570F6VB42 170 aa12.34□□□□□ -0.43
Trim3-203ENSMUST00000106791 4930524J08RikQ9CUJ5 163 aa12.34□□□□□ -0.43
Trim3-203ENSMUST00000106791 LbhQ9CX60 105 aa12.34□□□□□ -0.43
Trim3-203ENSMUST00000106791 Krtap14O08640 167 aa12.33□□□□□ -0.44
Trim3-203ENSMUST00000106791 Mtatp8P03930 67 aa12.33□□□□□ -0.44
Trim3-203ENSMUST00000106791 Q8K1L6 76 aa12.33□□□□□ -0.44
Trim3-203ENSMUST00000106791 ScxQ64124 207 aa12.32□□□□□ -0.44
Trim3-203ENSMUST00000106791 Gm10642Q3TWM1 71 aa12.3□□□□□ -0.44
Trim3-203ENSMUST00000106791 Igkv1-122A0A140T8M9 119 aa12.3□□□□□ -0.44
Trim3-203ENSMUST00000106791 Sigmar1O55242 223 aa12.3□□□□□ -0.44
Trim3-203ENSMUST00000106791 Gm26920S4R2A5 56 aa12.3□□□□□ -0.44
Trim3-203ENSMUST00000106791 Hint1P70349 126 aaKnown RBP12.29□□□□□ -0.44
Trim3-203ENSMUST00000106791 5730596B20RikQ8BQ08 205 aa12.29□□□□□ -0.44
Trim3-203ENSMUST00000106791 AI606181Q8C7B9 129 aa12.29□□□□□ -0.44
Trim3-203ENSMUST00000106791 Ube2aQ9Z255 152 aa12.29□□□□□ -0.44
Trim3-203ENSMUST00000106791 D130052B06RikQ3UW13 202 aa12.28□□□□□ -0.44
Trim3-203ENSMUST00000106791 A930002H24RikQ8C8Y3 163 aa12.28□□□□□ -0.44
Trim3-203ENSMUST00000106791 Defb37Q7TMD2 62 aa12.27□□□□□ -0.45
Trim3-203ENSMUST00000106791 Fam19a3Q7TPG6 132 aa12.27□□□□□ -0.45
Trim3-203ENSMUST00000106791 Gm27235Q3UW50 83 aa12.26□□□□□ -0.45
Trim3-203ENSMUST00000106791 Acyp1P56376 99 aa12.26□□□□□ -0.45
Trim3-203ENSMUST00000106791 1700020N15RikL7MTX3 112 aa12.25□□□□□ -0.45
Trim3-203ENSMUST00000106791 Tmem243B2RVB9 118 aa12.25□□□□□ -0.45
Trim3-203ENSMUST00000106791 Igkv2-109A0A075B5K6 120 aa12.24□□□□□ -0.45
Trim3-203ENSMUST00000106791 Gm10139O88245 57 aa12.22□□□□□ -0.45
Trim3-203ENSMUST00000106791 Igkv3-7A0A0G2JE31 119 aa12.21□□□□□ -0.45
Trim3-203ENSMUST00000106791 Igkv1-110A0A0B4J1I0 119 aa12.2□□□□□ -0.46
Trim3-203ENSMUST00000106791 Lrp1bQ9JI18 4599 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms