RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Ptpn13Q64512 2453 aa7.53□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Phxr4P15974 95 aa7.53□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Nbeal1E9PYP2 2688 aa7.52□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Epg5Q80TA9 2572 aa7.51□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Snhg11Q4G0K9 87 aa7.51□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Fam229bQ8CF36 80 aa7.51□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 A330070K13RikQ8CA53 115 aa7.5□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Gm11627A6PWP4 55 aa7.5□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Srsf12Q8C8K3 266 aa7.49□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 E130208F15RikQ3UPV3 143 aa7.48□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Gm42715A0A087WP63 3095 aaKnown RBP7.48□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Gm26661M0QWV4 156 aa7.48□□□□□ -1.21
Gtf3c1-201ENSMUST00000055506 Cep192E9Q4Y4 2514 aaKnown RBP7.46□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Krtap11-1E9Q2E9 183 aa7.45□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 1810062G17RikG3X8Y2 129 aa7.44□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 HrnrQ8VHD8 2496 aa7.44□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Spata3Q9D9T6 193 aa7.43□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Gm27235Q3UW50 83 aa7.43□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Gm7276Q3TYW4 209 aa7.43□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Gm3880A0A1B0GSB3 72 aa7.43□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Gm10772F7AIG4 85 aa7.43□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Gm10837Q3UTT8 145 aa7.43□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Anapc11Q9CPX9 84 aa7.43□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 MtorQ9JLN9 2549 aa7.41□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Chd8Q09XV5 2582 aaKnown RBP7.41□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Chtf8P0CG14 533 aa7.41□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Usp9yF8VPU6 2556 aa7.4□□□□□ -1.22
Gtf3c1-201ENSMUST00000055506 Defb11Q8R2I7 77 aa7.4□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Uqcr11Q9CPX8 56 aa7.39□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Pla2g10Q9QXX3 151 aa7.39□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Gm16181B0V2H2 73 aa7.38□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 CriptO70333 101 aa7.37□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Gm9573F7C950 1606 aa7.36□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Gm10643Q3URG9 111 aa7.36□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Dnah12Q3V0Q1 3086 aa7.35□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 TrioQ0KL02 3102 aa7.35□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Piezo1E2JF22 2547 aa7.35□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Lama3Q61789 3330 aa7.35□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Gm20538F6Z9R1 75 aa7.35□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Col27a1Q5QNQ9 1845 aa7.35□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 Bahcc1Q3UHR0 2643 aa7.35□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 CnbpP53996 178 aaKnown RBP7.34□□□□□ -1.23
Gtf3c1-201ENSMUST00000055506 AY074887Q8R5F9 132 aa7.32□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Cep350E9Q309 3095 aa7.31□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Col5a1O88207 1838 aa7.3□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 TrrapQ80YV3 2565 aaKnown RBP7.3□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Lama2Q60675 3118 aaKnown RBP7.3□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 C530025M09RikF6RGA8 229 aa7.3□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Sprr4Q8CGN8 76 aa7.29□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Krtap24-1G3X9A2 248 aa7.28□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Usp24B1AY13 2617 aaKnown RBP7.28□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Gm21798J3QNU5 87 aa7.28□□□□□ -1.24
Gtf3c1-201ENSMUST00000055506 Prune2Q52KR3 3084 aa7.27□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Col4a2P08122 1707 aa7.27□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 SetxA2AKX3 2646 aa7.27□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Cypt15B1AXS0 87 aa7.26□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 2310034C09RikQ9D746 214 aa7.26□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Bod1lE9Q6J5 3032 aa7.26□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Mki67E9PVX6 3177 aaKnown RBP7.25□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 CicQ924A2 2510 aa7.25□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Defb9Q8R2I6 67 aa7.24□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Gm3233E9Q2H5 230 aa7.24□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Smim29Q8R043 75 aa7.23□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Krtap26-1Q9D7N2 215 aa7.23□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Sprr1bQ62267 153 aa7.21□□□□□ -1.25
Gtf3c1-201ENSMUST00000055506 Ranbp2Q9ERU9 3053 aaKnown RBP7.19□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 Plac8Q9JI48 112 aa7.19□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 Lypd5Q9D7Z7 256 aa7.18□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 Cystm1Q8K353 104 aa7.17□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 6030445D17RikE9Q8F9 148 aa7.17□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 FasnP19096 2504 aaKnown RBP7.17□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 PcntP48725 2898 aa7.17□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 Frem2Q6NVD0 3160 aa7.16□□□□□ -1.26
Gtf3c1-201ENSMUST00000055506 Nsd1O88491 2588 aaKnown RBP7.14□□□□□ -1.27
Gtf3c1-201ENSMUST00000055506 Prrc2cQ3TLH4 2846 aaKnown RBP7.14□□□□□ -1.27
Gtf3c1-201ENSMUST00000055506 Spink7Q6IE32 76 aa7.14□□□□□ -1.27
Gtf3c1-201ENSMUST00000055506 Zcchc13Q9D548 170 aa7.11□□□□□ -1.27
Gtf3c1-201ENSMUST00000055506 Gm9821Q8K076 103 aa7.1□□□□□ -1.27
Gtf3c1-201ENSMUST00000055506 Abca12E9Q876 2595 aa7.09□□□□□ -1.27
Gtf3c1-201ENSMUST00000055506 Psors1c2Q80ZC9 134 aa7.09□□□□□ -1.27
Gtf3c1-201ENSMUST00000055506 Myo18bE9PV66 2605 aa7.08□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Kmt2bO08550 2713 aa7.08□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm7138L7N2C3 230 aa7.07□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm3238W4VSP7 230 aa7.07□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm9508A0A1W2P7W0 230 aa7.07□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Usp34Q6ZQ93 3582 aa7.07□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm10320E9PW43 113 aa7.07□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Fn1P11276 2477 aaKnown RBP7.07□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm3646F6S692 53 aa7.07□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Ankrd11E9Q4F7 2643 aa7.06□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm9955Q8CEJ8 102 aa7.06□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm26620Q9CY65 116 aa7.05□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 CenpfE9Q3P4 2997 aaKnown RBP7.05□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Unc79Q0KK59 2596 aa7.04□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm7137J3QMW1 236 aa7.04□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Unc80Q8BLN6 3261 aa7.03□□□□□ -1.28
Gtf3c1-201ENSMUST00000055506 Gm4491E0CX42 125 aa7.02□□□□□ -1.29
Gtf3c1-201ENSMUST00000055506 AW011738F6S7Q2 159 aa7.01□□□□□ -1.29
Gtf3c1-201ENSMUST00000055506 Cfap54Q8C6S9 3106 aa7□□□□□ -1.29
Gtf3c1-201ENSMUST00000055506 Ankrd17Q99NH0 2603 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 120 ms