RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Rhox8Q6VSS7 320 aa19.27■□□□□ 0.68
Gtf3c1-201ENSMUST00000055506 Ehmt2Q9Z148 1263 aaKnown RBP18.53■□□□□ 0.56
Gtf3c1-201ENSMUST00000055506 Rpgrip1Q9EPQ2 1331 aa17.99■□□□□ 0.47
Gtf3c1-201ENSMUST00000055506 Las1lA2BE28 776 aaKnown RBP17.93■□□□□ 0.46
Gtf3c1-201ENSMUST00000055506 Cngb1E1AZ71 1325 aa17.88■□□□□ 0.45
Gtf3c1-201ENSMUST00000055506 Wdr66E9Q743 1299 aa17.8■□□□□ 0.44
Gtf3c1-201ENSMUST00000055506 Amer1Q7TS75 1132 aa17.71■□□□□ 0.42
Gtf3c1-201ENSMUST00000055506 Zeb1Q64318 1117 aa17.69■□□□□ 0.42
Gtf3c1-201ENSMUST00000055506 Pelp1Q9DBD5 1123 aaKnown RBP17.54■□□□□ 0.4
Gtf3c1-201ENSMUST00000055506 Ube2uB1AUC4 352 aa17.23■□□□□ 0.35
Gtf3c1-201ENSMUST00000055506 Ttbk1Q6PCN3 1308 aa17.22■□□□□ 0.35
Gtf3c1-201ENSMUST00000055506 CenpbP27790 599 aa17.14■□□□□ 0.33
Gtf3c1-201ENSMUST00000055506 Gab3Q8BSM5 595 aa17.06■□□□□ 0.32
Gtf3c1-201ENSMUST00000055506 Ccdc136Q3TVA9 1136 aa17.05■□□□□ 0.32
Gtf3c1-201ENSMUST00000055506 Slc24a1Q91WD8 1130 aa16.98■□□□□ 0.31
Gtf3c1-201ENSMUST00000055506 Esf1Q3V1V3 845 aaKnown RBP16.74■□□□□ 0.27
Gtf3c1-201ENSMUST00000055506 Myt1lP97500 1187 aa16.7■□□□□ 0.26
Gtf3c1-201ENSMUST00000055506 4933416C03RikQ3V063 378 aa16.7■□□□□ 0.26
Gtf3c1-201ENSMUST00000055506 4930567H17RikQ3V0K5 233 aa16.69■□□□□ 0.26
Gtf3c1-201ENSMUST00000055506 Ppargc1bQ8VHJ7 1014 aa16.67■□□□□ 0.26
Gtf3c1-201ENSMUST00000055506 Acin1Q9JIX8 1338 aaKnown RBP16.61■□□□□ 0.25
Gtf3c1-201ENSMUST00000055506 Npm2Q80W85 207 aa16.59■□□□□ 0.25
Gtf3c1-201ENSMUST00000055506 UbtfP25976 765 aaKnown RBP16.56■□□□□ 0.24
Gtf3c1-201ENSMUST00000055506 Pcgf6Q99NA9 353 aa16.52■□□□□ 0.24
Gtf3c1-201ENSMUST00000055506 Myt1Q8CFC2 1127 aa16.48■□□□□ 0.23
Gtf3c1-201ENSMUST00000055506 Trim41Q5NCC3 630 aa16.46■□□□□ 0.23
Gtf3c1-201ENSMUST00000055506 Cdk11bP24788 784 aaKnown RBP16.43■□□□□ 0.22
Gtf3c1-201ENSMUST00000055506 Eif5bQ05D44 1216 aaKnown RBP16.4■□□□□ 0.22
Gtf3c1-201ENSMUST00000055506 Stra8P70278 393 aa16.36■□□□□ 0.21
Gtf3c1-201ENSMUST00000055506 DiexfQ8BTT6 772 aaKnown RBP16.3■□□□□ 0.2
Gtf3c1-201ENSMUST00000055506 NefmP08553 848 aa16.3■□□□□ 0.2
Gtf3c1-201ENSMUST00000055506 Supt5hO55201 1082 aaKnown RBP16.25■□□□□ 0.19
Gtf3c1-201ENSMUST00000055506 Nop58Q6DFW4 536 aaKnown RBP16.23■□□□□ 0.19
Gtf3c1-201ENSMUST00000055506 Gm38655A0A286YDK6 273 aa16.2■□□□□ 0.18
Gtf3c1-201ENSMUST00000055506 HrcG5E8J6 738 aa16.16■□□□□ 0.18
Gtf3c1-201ENSMUST00000055506 Neurod1Q60867 357 aa16.16■□□□□ 0.18
Gtf3c1-201ENSMUST00000055506 NrdcQ8BHG1 1161 aa16.05■□□□□ 0.16
Gtf3c1-201ENSMUST00000055506 NeflP08551 543 aa16.03■□□□□ 0.16
Gtf3c1-201ENSMUST00000055506 Tnnt3Q9QZ47 272 aa15.99■□□□□ 0.15
Gtf3c1-201ENSMUST00000055506 DaxxO35613 739 aa15.97■□□□□ 0.15
Gtf3c1-201ENSMUST00000055506 NclP09405 707 aaKnown RBP15.97■□□□□ 0.15
Gtf3c1-201ENSMUST00000055506 Ap3b1Q9Z1T1 1105 aa15.92■□□□□ 0.14
Gtf3c1-201ENSMUST00000055506 Fam50aQ9WV03 339 aaKnown RBP15.88■□□□□ 0.13
Gtf3c1-201ENSMUST00000055506 ArxO35085 564 aa15.84■□□□□ 0.13
Gtf3c1-201ENSMUST00000055506 Mapk8ip2Q9ERE9 830 aa15.8■□□□□ 0.12
Gtf3c1-201ENSMUST00000055506 Csrnp3P59055 597 aa15.78■□□□□ 0.12
Gtf3c1-201ENSMUST00000055506 Ythdc1E9Q5K9 736 aaKnown RBP15.75■□□□□ 0.11
Gtf3c1-201ENSMUST00000055506 Anp32bQ9EST5 272 aaKnown RBP15.75■□□□□ 0.11
Gtf3c1-201ENSMUST00000055506 Rtl5Q5DTT4 599 aa15.75■□□□□ 0.11
Gtf3c1-201ENSMUST00000055506 Os9Q8K2C7 672 aa15.74■□□□□ 0.11
Gtf3c1-201ENSMUST00000055506 Il27Q8K3I6 234 aa15.71■□□□□ 0.11
Gtf3c1-201ENSMUST00000055506 TonslQ6NZL6 1363 aa15.67■□□□□ 0.1
Gtf3c1-201ENSMUST00000055506 Anp32aO35381 247 aa15.64■□□□□ 0.09
Gtf3c1-201ENSMUST00000055506 Lmod3E9QA62 571 aa15.63■□□□□ 0.09
Gtf3c1-201ENSMUST00000055506 Zbtb4Q5F293 982 aa15.61■□□□□ 0.09
Gtf3c1-201ENSMUST00000055506 Mier1Q5UAK0 511 aa15.58■□□□□ 0.08
Gtf3c1-201ENSMUST00000055506 Chic1Q8CBW7 227 aa15.57■□□□□ 0.08
Gtf3c1-201ENSMUST00000055506 Zbtb7cQ8VCZ7 619 aa15.56■□□□□ 0.08
Gtf3c1-201ENSMUST00000055506 CatipB9EKE5 520 aa15.53■□□□□ 0.08
Gtf3c1-201ENSMUST00000055506 Prdm10Q3UTQ7 1184 aa15.5■□□□□ 0.07
Gtf3c1-201ENSMUST00000055506 Polr3glQ8R0C0 218 aa15.47■□□□□ 0.07
Gtf3c1-201ENSMUST00000055506 Rangap1P46061 589 aaKnown RBP15.42■□□□□ 0.06
Gtf3c1-201ENSMUST00000055506 Ccdc180J3QNE4 1664 aa15.41■□□□□ 0.06
Gtf3c1-201ENSMUST00000055506 Vsig10D3YX43 558 aa15.38■□□□□ 0.05
Gtf3c1-201ENSMUST00000055506 Ppp4r2Q0VGB7 417 aa15.37■□□□□ 0.05
Gtf3c1-201ENSMUST00000055506 Sall2Q9QX96 1004 aa15.36■□□□□ 0.05
Gtf3c1-201ENSMUST00000055506 ClspnQ80YR7 1315 aa15.35■□□□□ 0.05
Gtf3c1-201ENSMUST00000055506 Abcc9P70170 1546 aa15.35■□□□□ 0.05
Gtf3c1-201ENSMUST00000055506 Gm35339A0A140LHH9 1649 aa15.33■□□□□ 0.04
Gtf3c1-201ENSMUST00000055506 Eid3Q3V124 375 aa15.3■□□□□ 0.04
Gtf3c1-201ENSMUST00000055506 NischQ80TM9 1593 aa15.29■□□□□ 0.04
Gtf3c1-201ENSMUST00000055506 Anks4bQ8K3X6 423 aa15.28■□□□□ 0.04
Gtf3c1-201ENSMUST00000055506 Plekhg3Q4VAC9 1341 aa15.26■□□□□ 0.03
Gtf3c1-201ENSMUST00000055506 Lmod2Q3UHZ5 550 aa15.26■□□□□ 0.03
Gtf3c1-201ENSMUST00000055506 Upf2A2AT37 1269 aaKnown RBP15.22■□□□□ 0.03
Gtf3c1-201ENSMUST00000055506 Aplp2Q06335 707 aa15.22■□□□□ 0.03
Gtf3c1-201ENSMUST00000055506 Calr4Q3TQS0 420 aa15.2■□□□□ 0.02
Gtf3c1-201ENSMUST00000055506 Nlrp6Q91WS2 869 aa15.2■□□□□ 0.02
Gtf3c1-201ENSMUST00000055506 Hnrnpul2Q00PI9 745 aaKnown RBP15.2■□□□□ 0.02
Gtf3c1-201ENSMUST00000055506 DekQ7TNV0 380 aaKnown RBP15.18■□□□□ 0.02
Gtf3c1-201ENSMUST00000055506 Fam71e1A1L3C1 212 aa15.18■□□□□ 0.02
Gtf3c1-201ENSMUST00000055506 Hsp90aa1P07901 733 aaKnown RBP15.16■□□□□ 0.02
Gtf3c1-201ENSMUST00000055506 1700123L14RikQ3V2K7 440 aa15.13■□□□□ 0.01
Gtf3c1-201ENSMUST00000055506 Rad21Q61550 635 aaKnown RBP15.12■□□□□ 0.01
Gtf3c1-201ENSMUST00000055506 Arid4bA2CG63 1314 aaKnown RBP15.1■□□□□ 0.01
Gtf3c1-201ENSMUST00000055506 Erich6D3Z6S9 713 aa15.09■□□□□ 0.01
Gtf3c1-201ENSMUST00000055506 Bcl11aQ9QYE3 773 aa15.07■□□□□ 0
Gtf3c1-201ENSMUST00000055506 Atp1b4Q99ME6 356 aa15.05■□□□□ 0
Gtf3c1-201ENSMUST00000055506 Wdr43Q6ZQL4 677 aaKnown RBP15.03■□□□□ -0
Gtf3c1-201ENSMUST00000055506 Ifnlr1Q8CGK5 535 aa15.03■□□□□ -0
Gtf3c1-201ENSMUST00000055506 Trim44Q9QXA7 346 aa15.01□□□□□ -0.01
Gtf3c1-201ENSMUST00000055506 P3h3Q8CG70 732 aa14.98□□□□□ -0.01
Gtf3c1-201ENSMUST00000055506 Rtl1Q7M732 1744 aa14.97□□□□□ -0.01
Gtf3c1-201ENSMUST00000055506 Spryd3E9Q9B3 442 aa14.94□□□□□ -0.02
Gtf3c1-201ENSMUST00000055506 Gm13697A2AK42 830 aa14.94□□□□□ -0.02
Gtf3c1-201ENSMUST00000055506 CanxP35564 591 aaKnown RBP14.93□□□□□ -0.02
Gtf3c1-201ENSMUST00000055506 Plppr3Q7TPB0 716 aa14.93□□□□□ -0.02
Gtf3c1-201ENSMUST00000055506 Trim26Q99PN3 545 aa14.93□□□□□ -0.02
Gtf3c1-201ENSMUST00000055506 Znf316Q6PGE4 1016 aa14.9□□□□□ -0.02
Gtf3c1-201ENSMUST00000055506 Mrs2Q5NCE8 434 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms