RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Fat2Q5F226 4351 aa13.07□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 C920008G01RikA0A0B4J1N1 112 aa13.07□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Try10Q792Z1 246 aaKnown RBP13.07□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Tac4Q99N14 128 aa13.07□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Gm11020F6ZGD5 61 aa13.06□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Ccl25O35903 144 aa13.06□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Pglyrp4Q0VB07 374 aa13.06□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Gemin7Q9CWY4 129 aa13.06□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Ighv2-2A0A075B5P8 116 aa13.05□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Ighv2-5A0A0A6YY69 116 aa13.05□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Obox2E9PXV9 151 aa13.05□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 P01821 116 aa13.05□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Gm10577Q3UDV9 132 aa13.05□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Trav4d-3A0A075B625 110 aa13.04□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Prol1E9PYQ4 312 aa13.04□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Defb9Q8R2I6 67 aa13.04□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Defa20Q45VN2 95 aa13.03□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Lrp1Q91ZX7 4545 aaKnown RBP13.03□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Igf1P05017 153 aa13.02□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Rpl24Q8BP67 157 aaKnown RBP13.02□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Gtf2h5Q8K2X8 71 aa13.02□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Gm6793B2RXM2 351 aa13.01□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Defa13P50711 93 aa13.01□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Cops9Q3U898 57 aa13.01□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Adm2Q7TNK8 150 aa13.01□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Glrp1E9Q9S8 174 aa13□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Tcl1b3P56842 122 aa13□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 A330070K13RikQ8CA53 115 aa13□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Fam240bJ3QMB3 78 aa12.99□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Defa3P28310 93 aa12.99□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Cox7bP56393 80 aa12.98□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Phf5aP83870 110 aaKnown RBP12.98□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Igkv1-88A0A140T8N1 120 aa12.97□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Rpl28P41105 137 aaKnown RBP12.97□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Gm10845Q3UNY9 185 aa12.97□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Cdk2ap2Q9CPY4 127 aa12.97□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 Rpl18aP62717 176 aaKnown RBP12.97□□□□□ -0.33
Ssbp4-201ENSMUST00000049908 NbdyA0A0N4SUI7 68 aa12.96□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Krtap14O08640 167 aa12.96□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 P01819 144 aa12.96□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Igkv8-18A0A0B4J1J3 123 aa12.95□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 P84750 121 aa12.95□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 MturnQ8CGA4 131 aa12.95□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 4930415O20RikQ8CDT5 131 aa12.94□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Gm18596A0A1W2P860 280 aa12.93□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Slamf6Q9ET39 351 aa12.93□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Lst1O08843 95 aa12.92□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Lage3Q9CR70 148 aa12.92□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Ociad2Q9D8W7 154 aa12.92□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Defa4P28311 92 aa12.91□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Csdc2Q91YQ3 154 aa12.91□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 MalO09198 153 aa12.9□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Ube2bP63147 152 aa12.9□□□□□ -0.34
Ssbp4-201ENSMUST00000049908 Klk12B2RVZ0 247 aa12.89□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Gm5153P01627 120 aa12.89□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Spink13Q3UTS8 97 aa12.89□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Wdr38Q9D994 303 aa12.89□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Smim29Q8R043 75 aa12.88□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Dmac1Q9CQ00 111 aa12.88□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 LbhQ9CX60 105 aa12.88□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Gm10549Q3URY4 149 aa12.86□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 6030445D17RikE9Q8F9 148 aa12.85□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Defa7P50705 93 aa12.85□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Igkv1-117A0A140T8M0 119 aa12.84□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Rpl32-psP17932 135 aa12.84□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Hint1P70349 126 aaKnown RBP12.84□□□□□ -0.35
Ssbp4-201ENSMUST00000049908 Gm26920S4R2A5 56 aa12.83□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Herc1E9PZP8 4859 aa12.83□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Mrpl55Q9CZ83 127 aa12.82□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Ly6hQ9WUC3 139 aa12.81□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 CckP09240 115 aa12.8□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 NrepQ07475 68 aa12.8□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Wfdc10Q3V2J9 124 aa12.8□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Spata45Q9CVW4 97 aa12.8□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 BC048502Q80Y74 154 aa12.79□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Gm9805F6YK59 57 aa12.78□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Gm11011D3Z3L9 86 aa12.78□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Mrpl52Q9D0Y8 121 aa12.78□□□□□ -0.36
Ssbp4-201ENSMUST00000049908 Gm10570F6VB42 170 aa12.76□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Eif4ebp3Q80VV3 101 aa12.76□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Cd164Q9R0L9 197 aa12.76□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 2310034G01RikA0A286YDL3 209 aa12.75□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 D130052B06RikQ3UW13 202 aa12.75□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 SelenowP63300 88 aa12.74□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Rab37Q9JKM7 223 aa12.74□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Gm17521F6QAC8 156 aa12.72□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Gm10770F7D043 238 aa12.72□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Gm10642Q3TWM1 71 aa12.72□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Fam19a3Q7TPG6 132 aa12.72□□□□□ -0.37
Ssbp4-201ENSMUST00000049908 Lgals4Q8K419 326 aa12.71□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Cby1Q9D1C2 127 aa12.71□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Trav3-1Q5R1I8 114 aa12.7□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 D6Ertd527eA0A0N4SWI3 464 aa12.69□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Q8K1L6 76 aa12.69□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 HrnrQ8VHD8 2496 aa12.68□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Dnal4Q9DCM4 105 aa12.68□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Trav13n-2A0A0G2JF93 110 aa12.66□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Sigmar1O55242 223 aa12.66□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Gm5142Q8C5X9 133 aa12.66□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Q9DAA7 145 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 116.2 ms