RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Dph3Q8K0W9 82 aa10.27□□□□□ -0.77
Usp4-201ENSMUST00000035237 A530084C06RikQ3UTW2 186 aa10.27□□□□□ -0.77
Usp4-201ENSMUST00000035237 Defb40Q70KL2 73 aa10.27□□□□□ -0.77
Usp4-201ENSMUST00000035237 LystP97412 3788 aa10.26□□□□□ -0.77
Usp4-201ENSMUST00000035237 Igkv1-110A0A0B4J1I0 119 aa10.26□□□□□ -0.77
Usp4-201ENSMUST00000035237 E130114P18RikF6S0S7 154 aa10.26□□□□□ -0.77
Usp4-201ENSMUST00000035237 Ighv2-5A0A0A6YY69 116 aa10.25□□□□□ -0.77
Usp4-201ENSMUST00000035237 OtogO55225 2910 aa10.25□□□□□ -0.77
Usp4-201ENSMUST00000035237 CnbpP53996 178 aaKnown RBP10.25□□□□□ -0.77
Usp4-201ENSMUST00000035237 Krtap11-1E9Q2E9 183 aa10.24□□□□□ -0.77
Usp4-201ENSMUST00000035237 Gm10570F6VB42 170 aa10.23□□□□□ -0.77
Usp4-201ENSMUST00000035237 Sprr1bQ62267 153 aa10.23□□□□□ -0.77
Usp4-201ENSMUST00000035237 Akap13E9Q394 2776 aa10.23□□□□□ -0.77
Usp4-201ENSMUST00000035237 2310034G01RikA0A286YDL3 209 aa10.22□□□□□ -0.77
Usp4-201ENSMUST00000035237 HrnrQ8VHD8 2496 aa10.21□□□□□ -0.77
Usp4-201ENSMUST00000035237 A730009L09RikA0A1B0GS82 72 aa10.21□□□□□ -0.78
Usp4-201ENSMUST00000035237 Tcl1b5P56845 121 aa10.21□□□□□ -0.78
Usp4-201ENSMUST00000035237 CrygfQ9CXV3 174 aa10.21□□□□□ -0.78
Usp4-201ENSMUST00000035237 CrygeQ03740 174 aa10.2□□□□□ -0.78
Usp4-201ENSMUST00000035237 Gm10770F7D043 238 aa10.2□□□□□ -0.78
Usp4-201ENSMUST00000035237 Usp24B1AY13 2617 aaKnown RBP10.19□□□□□ -0.78
Usp4-201ENSMUST00000035237 Gm37389A0A0A6YW05 95 aa10.19□□□□□ -0.78
Usp4-201ENSMUST00000035237 6430550D23RikE9Q1X6 194 aa10.19□□□□□ -0.78
Usp4-201ENSMUST00000035237 Igkv8-28A0A0G2JE47 121 aa10.18□□□□□ -0.78
Usp4-201ENSMUST00000035237 UqcrqQ9CQ69 82 aa10.18□□□□□ -0.78
Usp4-201ENSMUST00000035237 Igkv3-2A0A075B5P0 119 aa10.18□□□□□ -0.78
Usp4-201ENSMUST00000035237 AY074887Q8R5F9 132 aa10.18□□□□□ -0.78
Usp4-201ENSMUST00000035237 Gm5617Q91VN2 117 aa10.17□□□□□ -0.78
Usp4-201ENSMUST00000035237 Gm17521F6QAC8 156 aa10.17□□□□□ -0.78
Usp4-201ENSMUST00000035237 Gm17509Q9CZ61 145 aa10.16□□□□□ -0.78
Usp4-201ENSMUST00000035237 Ube2bP63147 152 aa10.16□□□□□ -0.78
Usp4-201ENSMUST00000035237 A330070K13RikQ8CA53 115 aa10.15□□□□□ -0.78
Usp4-201ENSMUST00000035237 Gm10401E9Q3K6 71 aa10.15□□□□□ -0.78
Usp4-201ENSMUST00000035237 Erdr1J3QMM0 206 aa10.14□□□□□ -0.79
Usp4-201ENSMUST00000035237 Tex15F8VPN2 2785 aa10.14□□□□□ -0.79
Usp4-201ENSMUST00000035237 Sprr2jO70561 109 aa10.14□□□□□ -0.79
Usp4-201ENSMUST00000035237 Tenm3Q9WTS6 2715 aa10.13□□□□□ -0.79
Usp4-201ENSMUST00000035237 Elof1P60003 83 aa10.13□□□□□ -0.79
Usp4-201ENSMUST00000035237 Ighv2-2A0A075B5P8 116 aa10.13□□□□□ -0.79
Usp4-201ENSMUST00000035237 P01821 116 aa10.13□□□□□ -0.79
Usp4-201ENSMUST00000035237 Gm3233E9Q2H5 230 aa10.12□□□□□ -0.79
Usp4-201ENSMUST00000035237 Trav14-1A0A0G2JF94 121 aa10.12□□□□□ -0.79
Usp4-201ENSMUST00000035237 BaalcQ8VHV1 145 aa10.12□□□□□ -0.79
Usp4-201ENSMUST00000035237 AtrQ9JKK8 2635 aa10.11□□□□□ -0.79
Usp4-201ENSMUST00000035237 Krtap24-1G3X9A2 248 aa10.11□□□□□ -0.79
Usp4-201ENSMUST00000035237 Sslp1Q3UN54 99 aa10.1□□□□□ -0.79
Usp4-201ENSMUST00000035237 Igkv4-92A0A0B4J1I2 117 aa10.09□□□□□ -0.79
Usp4-201ENSMUST00000035237 C130032M10RikQ8C888 123 aa10.09□□□□□ -0.79
Usp4-201ENSMUST00000035237 A730071L15RikQ8C4X0 137 aa10.08□□□□□ -0.8
Usp4-201ENSMUST00000035237 Gm10197F6QEY5 67 aa10.08□□□□□ -0.8
Usp4-201ENSMUST00000035237 Pou2af1Q64693 256 aa10.08□□□□□ -0.8
Usp4-201ENSMUST00000035237 Gm11565A2A4M7 156 aa10.07□□□□□ -0.8
Usp4-201ENSMUST00000035237 Gm11213A0A1B0GR83 88 aa10.07□□□□□ -0.8
Usp4-201ENSMUST00000035237 Psors1c2Q80ZC9 134 aa10.07□□□□□ -0.8
Usp4-201ENSMUST00000035237 Ighv8-13A0A075B5Y0 101 aa10.06□□□□□ -0.8
Usp4-201ENSMUST00000035237 Coa6Q8BGD8 79 aa10.06□□□□□ -0.8
Usp4-201ENSMUST00000035237 Smim29Q8R043 75 aa10.06□□□□□ -0.8
Usp4-201ENSMUST00000035237 Spint4Q9D263 159 aa10.06□□□□□ -0.8
Usp4-201ENSMUST00000035237 Cox6a2P43023 97 aa10.06□□□□□ -0.8
Usp4-201ENSMUST00000035237 Pdzd2E9Q1M1 2796 aa10.05□□□□□ -0.8
Usp4-201ENSMUST00000035237 Wfdc13Q5DQQ6 81 aa10.05□□□□□ -0.8
Usp4-201ENSMUST00000035237 Mrpl34Q99N91 92 aa10.05□□□□□ -0.8
Usp4-201ENSMUST00000035237 Gm44790A0A0N4SV91 103 aa10.04□□□□□ -0.8
Usp4-201ENSMUST00000035237 Snhg11Q4G0K9 87 aa10.03□□□□□ -0.8
Usp4-201ENSMUST00000035237 H2al1bA0A087WP11 105 aa10.01□□□□□ -0.81
Usp4-201ENSMUST00000035237 H2al1kJ3QP08 105 aa10.01□□□□□ -0.81
Usp4-201ENSMUST00000035237 H2al1eQ810S6 105 aa10.01□□□□□ -0.81
Usp4-201ENSMUST00000035237 H2al1mQ9DAD9 105 aa10.01□□□□□ -0.81
Usp4-201ENSMUST00000035237 Q8BT88 171 aa10.01□□□□□ -0.81
Usp4-201ENSMUST00000035237 Atox1O08997 68 aaKnown RBP10□□□□□ -0.81
Usp4-201ENSMUST00000035237 Obox2E9PXV9 151 aa10□□□□□ -0.81
Usp4-201ENSMUST00000035237 Gm28374F6SG70 93 aa9.98□□□□□ -0.81
Usp4-201ENSMUST00000035237 Bean1Q9EQG5 255 aa9.97□□□□□ -0.81
Usp4-201ENSMUST00000035237 Stab1Q8R4Y4 2571 aa9.97□□□□□ -0.81
Usp4-201ENSMUST00000035237 Nsd1O88491 2588 aaKnown RBP9.97□□□□□ -0.81
Usp4-201ENSMUST00000035237 Csmd2V9GX34 3611 aa9.97□□□□□ -0.81
Usp4-201ENSMUST00000035237 Igkv8-19A0A0G2JFN8 121 aa9.97□□□□□ -0.81
Usp4-201ENSMUST00000035237 Fn1P11276 2477 aaKnown RBP9.97□□□□□ -0.81
Usp4-201ENSMUST00000035237 PscaP57096 123 aa9.96□□□□□ -0.81
Usp4-201ENSMUST00000035237 Sprr4Q8CGN8 76 aa9.96□□□□□ -0.81
Usp4-201ENSMUST00000035237 CicQ924A2 2510 aa9.96□□□□□ -0.82
Usp4-201ENSMUST00000035237 1700018G05RikA0A1B0GSI2 66 aa9.96□□□□□ -0.82
Usp4-201ENSMUST00000035237 ApcQ61315 2845 aa9.96□□□□□ -0.82
Usp4-201ENSMUST00000035237 Reg3aO09037 175 aa9.95□□□□□ -0.82
Usp4-201ENSMUST00000035237 Vpreb3D3Z6J4 130 aa9.95□□□□□ -0.82
Usp4-201ENSMUST00000035237 1700074P13RikQ9D9G7 251 aa9.95□□□□□ -0.82
Usp4-201ENSMUST00000035237 Gm12353A2AGJ4 60 aa9.94□□□□□ -0.82
Usp4-201ENSMUST00000035237 Fam168bQ80XQ8 194 aa9.94□□□□□ -0.82
Usp4-201ENSMUST00000035237 9230102O04RikA2ASX7 82 aa9.94□□□□□ -0.82
Usp4-201ENSMUST00000035237 Nbeal2Q6ZQA0 2742 aa9.94□□□□□ -0.82
Usp4-201ENSMUST00000035237 Igkv3-4A0A140T8Q4 119 aa9.93□□□□□ -0.82
Usp4-201ENSMUST00000035237 A0A286YE49 62 aa9.93□□□□□ -0.82
Usp4-201ENSMUST00000035237 Gm16485Q8C4B7 115 aa9.93□□□□□ -0.82
Usp4-201ENSMUST00000035237 Gm21886J3QJU9 214 aa9.92□□□□□ -0.82
Usp4-201ENSMUST00000035237 Defb38Q7TNV7 63 aa9.92□□□□□ -0.82
Usp4-201ENSMUST00000035237 Cdc42se1Q8BHL7 80 aa9.91□□□□□ -0.82
Usp4-201ENSMUST00000035237 Gm10267M0QWD8 85 aa9.89□□□□□ -0.83
Usp4-201ENSMUST00000035237 Igkv3-12A0A140T8P0 119 aa9.89□□□□□ -0.83
Usp4-201ENSMUST00000035237 AI606181Q8C7B9 129 aa9.89□□□□□ -0.83
Usp4-201ENSMUST00000035237 B9d2Q3UK10 175 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms