RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm10308Q9CVR5 141 aa10.96□□□□□ -0.65
Trim8-201ENSMUST00000026008 Gm17577J3QNF7 156 aa10.96□□□□□ -0.66
Trim8-201ENSMUST00000026008 Reg3bP35230 175 aa10.96□□□□□ -0.66
Trim8-201ENSMUST00000026008 Mrpl52Q9D0Y8 121 aa10.96□□□□□ -0.66
Trim8-201ENSMUST00000026008 Ighv8-13A0A075B5Y0 101 aa10.95□□□□□ -0.66
Trim8-201ENSMUST00000026008 Igkv8-34A0A0G2JDU0 121 aa10.95□□□□□ -0.66
Trim8-201ENSMUST00000026008 Snhg11Q4G0K9 87 aa10.94□□□□□ -0.66
Trim8-201ENSMUST00000026008 B230307C23RikQ8BLB2 64 aa10.94□□□□□ -0.66
Trim8-201ENSMUST00000026008 Gm11213A0A1B0GR83 88 aa10.94□□□□□ -0.66
Trim8-201ENSMUST00000026008 Inafm2A0A1L1STD6 152 aa10.93□□□□□ -0.66
Trim8-201ENSMUST00000026008 2310034G01RikA0A286YDL3 209 aa10.93□□□□□ -0.66
Trim8-201ENSMUST00000026008 Gm7137J3QMW1 236 aa10.93□□□□□ -0.66
Trim8-201ENSMUST00000026008 Tcl1b5P56845 121 aa10.93□□□□□ -0.66
Trim8-201ENSMUST00000026008 Fn1P11276 2477 aaKnown RBP10.93□□□□□ -0.66
Trim8-201ENSMUST00000026008 Gm17689B3GLJ4 109 aa10.93□□□□□ -0.66
Trim8-201ENSMUST00000026008 Cox7b2Q9D2H1 82 aa10.93□□□□□ -0.66
Trim8-201ENSMUST00000026008 Cd164Q9R0L9 197 aa10.92□□□□□ -0.66
Trim8-201ENSMUST00000026008 Gm10770F7D043 238 aa10.91□□□□□ -0.66
Trim8-201ENSMUST00000026008 Igkv1-122A0A140T8M9 119 aa10.9□□□□□ -0.66
Trim8-201ENSMUST00000026008 Rbm3O89086 153 aaKnown RBP10.9□□□□□ -0.66
Trim8-201ENSMUST00000026008 Cdk2ap2Q9CPY4 127 aa10.9□□□□□ -0.66
Trim8-201ENSMUST00000026008 Gm17509Q9CZ61 145 aa10.9□□□□□ -0.66
Trim8-201ENSMUST00000026008 Camk2n2Q78WH7 79 aa10.9□□□□□ -0.66
Trim8-201ENSMUST00000026008 9430015G10RikA2ASP7 199 aa10.89□□□□□ -0.67
Trim8-201ENSMUST00000026008 VwfQ8CIZ8 2813 aa10.88□□□□□ -0.67
Trim8-201ENSMUST00000026008 Fam19a3Q7TPG6 132 aa10.88□□□□□ -0.67
Trim8-201ENSMUST00000026008 Smim29Q8R043 75 aa10.87□□□□□ -0.67
Trim8-201ENSMUST00000026008 GhrhP16043 103 aa10.86□□□□□ -0.67
Trim8-201ENSMUST00000026008 A730071L15RikQ8C4X0 137 aa10.86□□□□□ -0.67
Trim8-201ENSMUST00000026008 Igkv4-92A0A0B4J1I2 117 aa10.85□□□□□ -0.67
Trim8-201ENSMUST00000026008 BikO70337 150 aa10.85□□□□□ -0.67
Trim8-201ENSMUST00000026008 Gm36176A0A1W2P8D5 158 aa10.84□□□□□ -0.67
Trim8-201ENSMUST00000026008 Igkv1-110A0A0B4J1I0 119 aa10.84□□□□□ -0.67
Trim8-201ENSMUST00000026008 BC048502Q80Y74 154 aa10.84□□□□□ -0.67
Trim8-201ENSMUST00000026008 A0A286YE02 88 aa10.83□□□□□ -0.68
Trim8-201ENSMUST00000026008 Tmem258P61166 79 aa10.82□□□□□ -0.68
Trim8-201ENSMUST00000026008 A830005F24RikQ8BRT5 167 aa10.82□□□□□ -0.68
Trim8-201ENSMUST00000026008 Ighv2-5A0A0A6YY69 116 aa10.82□□□□□ -0.68
Trim8-201ENSMUST00000026008 Elof1P60003 83 aa10.82□□□□□ -0.68
Trim8-201ENSMUST00000026008 Igkv8-28A0A0G2JE47 121 aa10.81□□□□□ -0.68
Trim8-201ENSMUST00000026008 E130114P18RikF6S0S7 154 aa10.81□□□□□ -0.68
Trim8-201ENSMUST00000026008 Trav14-1A0A0G2JF94 121 aa10.8□□□□□ -0.68
Trim8-201ENSMUST00000026008 HrnrQ8VHD8 2496 aa10.8□□□□□ -0.68
Trim8-201ENSMUST00000026008 Sprr4Q8CGN8 76 aa10.79□□□□□ -0.68
Trim8-201ENSMUST00000026008 Brk1Q91VR8 75 aa10.77□□□□□ -0.68
Trim8-201ENSMUST00000026008 Samd13D3YUG0 102 aa10.77□□□□□ -0.69
Trim8-201ENSMUST00000026008 Pde6gP09174 87 aa10.76□□□□□ -0.69
Trim8-201ENSMUST00000026008 Gm19935A0A1B0GSF9 52 aa10.75□□□□□ -0.69
Trim8-201ENSMUST00000026008 A330070K13RikQ8CA53 115 aa10.75□□□□□ -0.69
Trim8-201ENSMUST00000026008 SnurfQ9WU12 71 aa10.75□□□□□ -0.69
Trim8-201ENSMUST00000026008 Pou2af1Q64693 256 aa10.74□□□□□ -0.69
Trim8-201ENSMUST00000026008 Sfta2E9PXB6 77 aa10.74□□□□□ -0.69
Trim8-201ENSMUST00000026008 Phxr5P08399 672 aa10.73□□□□□ -0.69
Trim8-201ENSMUST00000026008 AplnQ9R0R4 77 aa10.73□□□□□ -0.69
Trim8-201ENSMUST00000026008 Fam19a5Q91WE9 132 aa10.73□□□□□ -0.69
Trim8-201ENSMUST00000026008 Vpreb2P13373 142 aa10.72□□□□□ -0.69
Trim8-201ENSMUST00000026008 Igkv3-2A0A075B5P0 119 aa10.72□□□□□ -0.69
Trim8-201ENSMUST00000026008 Rps28P62858 69 aaKnown RBP10.71□□□□□ -0.69
Trim8-201ENSMUST00000026008 Sslp1Q3UN54 99 aa10.71□□□□□ -0.69
Trim8-201ENSMUST00000026008 Mrpl55Q9CZ83 127 aa10.71□□□□□ -0.69
Trim8-201ENSMUST00000026008 Defa27F2Z403 93 aa10.71□□□□□ -0.7
Trim8-201ENSMUST00000026008 Gm28374F6SG70 93 aa10.7□□□□□ -0.7
Trim8-201ENSMUST00000026008 Fam168bQ80XQ8 194 aa10.7□□□□□ -0.7
Trim8-201ENSMUST00000026008 Igsf10Q3V1M1 2594 aa10.69□□□□□ -0.7
Trim8-201ENSMUST00000026008 Dnah10D3YYQ8 4591 aa10.69□□□□□ -0.7
Trim8-201ENSMUST00000026008 Gm11011D3Z3L9 86 aa10.69□□□□□ -0.7
Trim8-201ENSMUST00000026008 Gm16485Q8C4B7 115 aa10.69□□□□□ -0.7
Trim8-201ENSMUST00000026008 Ndufc1Q9CQY9 76 aa10.69□□□□□ -0.7
Trim8-201ENSMUST00000026008 Ighv2-2A0A075B5P8 116 aa10.68□□□□□ -0.7
Trim8-201ENSMUST00000026008 P01821 116 aa10.68□□□□□ -0.7
Trim8-201ENSMUST00000026008 Prr15lQ8JZM2 100 aa10.68□□□□□ -0.7
Trim8-201ENSMUST00000026008 Sec61gP60060 68 aa10.67□□□□□ -0.7
Trim8-201ENSMUST00000026008 Defb40Q70KL2 73 aa10.65□□□□□ -0.71
Trim8-201ENSMUST00000026008 Gm7276Q3TYW4 209 aa10.64□□□□□ -0.71
Trim8-201ENSMUST00000026008 Sprr2jO70561 109 aa10.63□□□□□ -0.71
Trim8-201ENSMUST00000026008 P06320 134 aa10.63□□□□□ -0.71
Trim8-201ENSMUST00000026008 Cox6a2P43023 97 aa10.62□□□□□ -0.71
Trim8-201ENSMUST00000026008 C130032M10RikQ8C888 123 aa10.61□□□□□ -0.71
Trim8-201ENSMUST00000026008 Gm37389A0A0A6YW05 95 aa10.6□□□□□ -0.71
Trim8-201ENSMUST00000026008 P84750 121 aa10.6□□□□□ -0.71
Trim8-201ENSMUST00000026008 Defa28D3Z1V9 94 aa10.6□□□□□ -0.71
Trim8-201ENSMUST00000026008 Pkd1l1Q8R526 2615 aa10.6□□□□□ -0.71
Trim8-201ENSMUST00000026008 Gm16181B0V2H2 73 aa10.59□□□□□ -0.71
Trim8-201ENSMUST00000026008 Gm10337F7DEP7 55 aa10.59□□□□□ -0.71
Trim8-201ENSMUST00000026008 Wfdc17Q5SSJ1 76 aa10.58□□□□□ -0.72
Trim8-201ENSMUST00000026008 Dmac1Q9CQ00 111 aa10.58□□□□□ -0.72
Trim8-201ENSMUST00000026008 Obox2E9PXV9 151 aa10.58□□□□□ -0.72
Trim8-201ENSMUST00000026008 PscaP57096 123 aa10.58□□□□□ -0.72
Trim8-201ENSMUST00000026008 Spink8Q09TK9 105 aa10.58□□□□□ -0.72
Trim8-201ENSMUST00000026008 Gm5617Q91VN2 117 aa10.58□□□□□ -0.72
Trim8-201ENSMUST00000026008 Pet100P0DJE0 76 aa10.57□□□□□ -0.72
Trim8-201ENSMUST00000026008 H2al1aQ5M8Q2 105 aa10.57□□□□□ -0.72
Trim8-201ENSMUST00000026008 Csmd3Q80T79 3707 aa10.57□□□□□ -0.72
Trim8-201ENSMUST00000026008 Gm17521F6QAC8 156 aa10.56□□□□□ -0.72
Trim8-201ENSMUST00000026008 TgO08710 2766 aa10.56□□□□□ -0.72
Trim8-201ENSMUST00000026008 Gm44790A0A0N4SV91 103 aa10.56□□□□□ -0.72
Trim8-201ENSMUST00000026008 Ube2bP63147 152 aa10.56□□□□□ -0.72
Trim8-201ENSMUST00000026008 Kmt2aP55200 3966 aa10.56□□□□□ -0.72
Trim8-201ENSMUST00000026008 BaalcQ8VHV1 145 aa10.56□□□□□ -0.72
Trim8-201ENSMUST00000026008 6430550D23RikE9Q1X6 194 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms