RNA–Protein interactions for RNA: ENSMUST00000025804.5

Rab1b-201, Transcript of Ras-related protein Rab-1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab1b, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab1b-201ENSMUST00000025804 A0A286YCN5 57 aa11.61□□□□□ -0.55
Rab1b-201ENSMUST00000025804 4930519P11RikQ9CUJ8 166 aa11.61□□□□□ -0.55
Rab1b-201ENSMUST00000025804 Ufsp1Q9CZP0 217 aa11.6□□□□□ -0.55
Rab1b-201ENSMUST00000025804 Gm10735Q3US96 136 aa11.59□□□□□ -0.55
Rab1b-201ENSMUST00000025804 TeppQ6IMH0 216 aa11.59□□□□□ -0.55
Rab1b-201ENSMUST00000025804 Trav14-1A0A0G2JF94 121 aa11.58□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Igkv1-35A0A0G2JDE5 120 aa11.57□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Trav13n-2A0A0G2JF93 110 aa11.57□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Lyrm7Q9DA03 104 aa11.57□□□□□ -0.56
Rab1b-201ENSMUST00000025804 5730596B20RikQ8BQ08 205 aa11.56□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Mrpl52Q9D0Y8 121 aa11.56□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Plac8Q9JI48 112 aa11.56□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Igkv3-2A0A075B5P0 119 aa11.56□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Sprr1aQ62266 144 aa11.56□□□□□ -0.56
Rab1b-201ENSMUST00000025804 PscaP57096 123 aa11.55□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Gm10837Q3UTT8 145 aa11.55□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Znf414Q9DCK4 299 aa11.54□□□□□ -0.56
Rab1b-201ENSMUST00000025804 TgO08710 2766 aa11.54□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Gm17577J3QNF7 156 aa11.53□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Gm9805F6YK59 57 aa11.53□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Gm10770F7D043 238 aa11.53□□□□□ -0.56
Rab1b-201ENSMUST00000025804 BB014433Q8C5R5 389 aa11.53□□□□□ -0.56
Rab1b-201ENSMUST00000025804 Rpl18aP62717 176 aaKnown RBP11.52□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Rpl39lQ9CQD0 51 aa11.52□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Defa20Q45VN2 95 aa11.51□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Ighv10-1A0A0B4J1J6 119 aa11.51□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Gm11627A6PWP4 55 aa11.49□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Xcl1P47993 114 aa11.49□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Krtap10-4Q08EG8 221 aa11.49□□□□□ -0.57
Rab1b-201ENSMUST00000025804 BC048502Q80Y74 154 aa11.49□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Anapc13Q8R034 74 aa11.49□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Cdk2ap2Q9CPY4 127 aa11.48□□□□□ -0.57
Rab1b-201ENSMUST00000025804 1700012A03RikQ9DAF1 130 aa11.46□□□□□ -0.57
Rab1b-201ENSMUST00000025804 Klk12B2RVZ0 247 aa11.46□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Vps13dB1ART2 4390 aa11.46□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Tmem213Q08EA8 116 aa11.45□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Pou2af1Q64693 256 aa11.44□□□□□ -0.58
Rab1b-201ENSMUST00000025804 SycnQ8VCK7 134 aa11.44□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Igkv1-88A0A140T8N1 120 aa11.42□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Ifitm6A0A1B0GS75 124 aa11.42□□□□□ -0.58
Rab1b-201ENSMUST00000025804 2310034G01RikA0A286YDL3 209 aa11.42□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Gm10320E9PW43 113 aa11.42□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Trav14d-3-dv8A0A075B619 120 aa11.41□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Igkv4-58A0A0G2JGI6 119 aa11.4□□□□□ -0.58
Rab1b-201ENSMUST00000025804 Fam168bQ80XQ8 194 aa11.39□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Prr13Q9CQJ5 137 aa11.39□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Wfdc6bF6ULY1 148 aa11.39□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Ighv10-3A0A075B5T6 119 aa11.38□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Elof1P60003 83 aa11.38□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Wfdc3Q14AE4 130 aa11.38□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Gm7276Q3TYW4 209 aa11.38□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Fam19a5Q91WE9 132 aa11.37□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Dnah2P0C6F1 4456 aa11.36□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Igkv2-109A0A075B5K6 120 aa11.36□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Gm7102J3QQ10 178 aa11.36□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Msrb1Q9JLC3 116 aa11.36□□□□□ -0.59
Rab1b-201ENSMUST00000025804 E130218I03RikA0A0U1RNU5 63 aa11.35□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Obox2E9PXV9 151 aa11.35□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Defa4P28311 92 aa11.35□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Defa23Q5G866 93 aa11.35□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Fam19a1Q7TPG8 133 aa11.35□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Ryr3A2AGL3 4863 aa11.35□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Igkv8-26A0A075B5N5 123 aa11.35□□□□□ -0.59
Rab1b-201ENSMUST00000025804 PkigO70139 76 aa11.34□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Cd164Q9R0L9 197 aa11.34□□□□□ -0.59
Rab1b-201ENSMUST00000025804 Prol1E9PYQ4 312 aa11.33□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Atp5eP56382 52 aa11.33□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Ntn5Q3UQ22 452 aa11.32□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Inafm2A0A1L1STD6 152 aa11.32□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Gm28374F6SG70 93 aa11.32□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Defa27F2Z403 93 aa11.31□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Dmac1Q9CQ00 111 aa11.31□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Q9DAA7 145 aa11.31□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Zcchc13Q9D548 170 aa11.3□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Gm10065F6TJM2 114 aa11.3□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Dnah5Q8VHE6 4621 aa11.29□□□□□ -0.6
Rab1b-201ENSMUST00000025804 9530003J23RikQ8BM26 151 aa11.29□□□□□ -0.6
Rab1b-201ENSMUST00000025804 P84750 121 aa11.28□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Pkd1O08852 4293 aa11.27□□□□□ -0.6
Rab1b-201ENSMUST00000025804 Ryr2E9Q401 4966 aaKnown RBP11.27□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Smim29Q8R043 75 aa11.27□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Gm2696A0A1W2P709 240 aa11.25□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Lamtor3O88653 124 aa11.25□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Gm28539A0A087WSL9 92 aa11.25□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Igkv8-27A0A0G2JF28 120 aa11.25□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Igkv8-30A0A140T8M3 121 aa11.25□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Pde6gP09174 87 aa11.24□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Krtap29-1A2A5X4 342 aa11.23□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Ighv2-2A0A075B5P8 116 aa11.23□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Ighv2-5A0A0A6YY69 116 aa11.23□□□□□ -0.61
Rab1b-201ENSMUST00000025804 P01821 116 aa11.23□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Ormdl1Q921I0 153 aa11.23□□□□□ -0.61
Rab1b-201ENSMUST00000025804 1600014C23RikQ9DAX4 101 aa11.23□□□□□ -0.61
Rab1b-201ENSMUST00000025804 Phf5aP83870 110 aaKnown RBP11.2□□□□□ -0.62
Rab1b-201ENSMUST00000025804 Defb9Q8R2I6 67 aa11.19□□□□□ -0.62
Rab1b-201ENSMUST00000025804 Rbm3O89086 153 aaKnown RBP11.19□□□□□ -0.62
Rab1b-201ENSMUST00000025804 SmcpP15265 143 aa11.18□□□□□ -0.62
Rab1b-201ENSMUST00000025804 Ube2bP63147 152 aa11.18□□□□□ -0.62
Rab1b-201ENSMUST00000025804 Stard9Q80TF6 4561 aa11.17□□□□□ -0.62
Rab1b-201ENSMUST00000025804 Gm11011D3Z3L9 86 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms