RNA–Protein interactions for RNA: ENSMUST00000025804.5

Rab1b-201, Transcript of Ras-related protein Rab-1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab1b, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab1b-201ENSMUST00000025804 Gm35339A0A140LHH9 1649 aa37.71■■■■□ 3.63
Rab1b-201ENSMUST00000025804 NischQ80TM9 1593 aa37.69■■■■□ 3.62
Rab1b-201ENSMUST00000025804 Abcc9P70170 1546 aa36.56■■■■□ 3.44
Rab1b-201ENSMUST00000025804 Abcc8B2RUS7 1588 aa36.16■■■■□ 3.38
Rab1b-201ENSMUST00000025804 ScribQ80U72 1612 aa34.51■■■■□ 3.12
Rab1b-201ENSMUST00000025804 Rhox8Q6VSS7 320 aa33.59■■■□□ 2.97
Rab1b-201ENSMUST00000025804 Kdm5dQ62240 1548 aa33.5■■■□□ 2.95
Rab1b-201ENSMUST00000025804 Dcaf1Q80TR8 1506 aa33.49■■■□□ 2.95
Rab1b-201ENSMUST00000025804 NacadQ5SWP3 1504 aa33.46■■■□□ 2.95
Rab1b-201ENSMUST00000025804 Rb1cc1Q9ESK9 1588 aa32.96■■■□□ 2.87
Rab1b-201ENSMUST00000025804 Sycp2Q9CUU3 1500 aa32.81■■■□□ 2.84
Rab1b-201ENSMUST00000025804 Ccdc180J3QNE4 1664 aa32.54■■■□□ 2.8
Rab1b-201ENSMUST00000025804 Baz1aO88379 1555 aa32.52■■■□□ 2.8
Rab1b-201ENSMUST00000025804 BicraF8VPZ9 1578 aa32.29■■■□□ 2.76
Rab1b-201ENSMUST00000025804 Crybg2B7ZCC2 1516 aa32.15■■■□□ 2.74
Rab1b-201ENSMUST00000025804 Rtl1Q7M732 1744 aa32.02■■■□□ 2.72
Rab1b-201ENSMUST00000025804 Zcchc6Q5BLK4 1491 aaKnown RBP31.97■■■□□ 2.71
Rab1b-201ENSMUST00000025804 Smarca2Q6DIC0 1577 aa31.67■■■□□ 2.66
Rab1b-201ENSMUST00000025804 Ccdc136Q3TVA9 1136 aa31.27■■■□□ 2.6
Rab1b-201ENSMUST00000025804 Cecr2E9Q2Z1 1453 aa31.23■■■□□ 2.59
Rab1b-201ENSMUST00000025804 Pds5bQ4VA53 1446 aaKnown RBP31.19■■■□□ 2.58
Rab1b-201ENSMUST00000025804 Atad2bE9Q166 1460 aaKnown RBP31.03■■■□□ 2.56
Rab1b-201ENSMUST00000025804 Smarca4Q3TKT4 1613 aaKnown RBP31■■■□□ 2.55
Rab1b-201ENSMUST00000025804 Brd4Q9ESU6 1400 aaKnown RBP30.85■■■□□ 2.53
Rab1b-201ENSMUST00000025804 Iqgap2Q3UQ44 1575 aa30.76■■■□□ 2.51
Rab1b-201ENSMUST00000025804 Trim41Q5NCC3 630 aa30.75■■■□□ 2.51
Rab1b-201ENSMUST00000025804 Synj1Q8CHC4 1574 aa30.72■■■□□ 2.51
Rab1b-201ENSMUST00000025804 Thoc2B1AZI6 1594 aaKnown RBP30.7■■■□□ 2.5
Rab1b-201ENSMUST00000025804 Dnajc5bQ9CQ94 199 aa30.68■■■□□ 2.5
Rab1b-201ENSMUST00000025804 CftrP26361 1476 aa30.65■■■□□ 2.5
Rab1b-201ENSMUST00000025804 Cttnbp2B9EJA2 1648 aa30.6■■■□□ 2.49
Rab1b-201ENSMUST00000025804 Ercc6F8VPZ5 1481 aa30.52■■■□□ 2.48
Rab1b-201ENSMUST00000025804 Frmpd1A2AKB4 1549 aa30.42■■■□□ 2.46
Rab1b-201ENSMUST00000025804 Wdr62Q3U3T8 1523 aa30.41■■■□□ 2.46
Rab1b-201ENSMUST00000025804 Cc2d2aQ8CFW7 1633 aa30.27■■■□□ 2.44
Rab1b-201ENSMUST00000025804 Esf1Q3V1V3 845 aaKnown RBP30.26■■■□□ 2.43
Rab1b-201ENSMUST00000025804 Fam135aQ6NS59 1506 aa30.12■■■□□ 2.41
Rab1b-201ENSMUST00000025804 Golga3P55937 1487 aa30.09■■■□□ 2.41
Rab1b-201ENSMUST00000025804 Phldb1Q6PDH0 1371 aaKnown RBP30.08■■■□□ 2.41
Rab1b-201ENSMUST00000025804 Cngb1E1AZ71 1325 aa30.06■■■□□ 2.4
Rab1b-201ENSMUST00000025804 Unc13aQ4KUS2 1712 aa29.97■■■□□ 2.39
Rab1b-201ENSMUST00000025804 Top2bQ64511 1612 aa29.92■■■□□ 2.38
Rab1b-201ENSMUST00000025804 Ubl4bQ9CQ84 188 aa29.85■■■□□ 2.37
Rab1b-201ENSMUST00000025804 HrcG5E8J6 738 aa29.78■■■□□ 2.36
Rab1b-201ENSMUST00000025804 Baz1bQ9Z277 1479 aa29.64■■■□□ 2.34
Rab1b-201ENSMUST00000025804 Rsf1E9PWW9 1441 aaKnown RBP29.62■■■□□ 2.33
Rab1b-201ENSMUST00000025804 Fmn1Q05860 1466 aa29.56■■■□□ 2.32
Rab1b-201ENSMUST00000025804 Ccdc88bQ4QRL3 1481 aa29.55■■■□□ 2.32
Rab1b-201ENSMUST00000025804 Kif15Q6P9L6 1387 aa29.53■■■□□ 2.32
Rab1b-201ENSMUST00000025804 Lamc3Q9R0B6 1581 aa29.53■■■□□ 2.32
Rab1b-201ENSMUST00000025804 TnnQ80Z71 1560 aa29.48■■■□□ 2.31
Rab1b-201ENSMUST00000025804 Chic1Q8CBW7 227 aa29.46■■■□□ 2.31
Rab1b-201ENSMUST00000025804 Mrc2Q64449 1479 aa29.43■■■□□ 2.3
Rab1b-201ENSMUST00000025804 Cep164Q5DU05 1446 aa29.4■■■□□ 2.3
Rab1b-201ENSMUST00000025804 Cux2P70298 1426 aa29.38■■■□□ 2.29
Rab1b-201ENSMUST00000025804 Top2aQ01320 1528 aaKnown RBP29.19■■■□□ 2.26
Rab1b-201ENSMUST00000025804 Ccdc18Q640L5 1455 aa29.14■■■□□ 2.26
Rab1b-201ENSMUST00000025804 Camsap1A2AHC3 1581 aa29.14■■■□□ 2.25
Rab1b-201ENSMUST00000025804 Npm1Q61937 292 aaKnown RBP29.11■■■□□ 2.25
Rab1b-201ENSMUST00000025804 Il27Q8K3I6 234 aa29.1■■■□□ 2.25
Rab1b-201ENSMUST00000025804 Gab3Q8BSM5 595 aa28.98■■■□□ 2.23
Rab1b-201ENSMUST00000025804 Kif21aQ9QXL2 1672 aa28.97■■■□□ 2.23
Rab1b-201ENSMUST00000025804 LrpprcQ6PB66 1392 aaKnown RBP28.86■■■□□ 2.21
Rab1b-201ENSMUST00000025804 Grin2bQ01097 1482 aa28.82■■■□□ 2.2
Rab1b-201ENSMUST00000025804 Dhx29Q6PGC1 1365 aaKnown RBP28.8■■■□□ 2.2
Rab1b-201ENSMUST00000025804 Lrriq1Q0P5X1 1673 aa28.75■■■□□ 2.19
Rab1b-201ENSMUST00000025804 PogzQ8BZH4 1409 aaKnown RBP28.72■■■□□ 2.19
Rab1b-201ENSMUST00000025804 NrkQ9R0G8 1455 aa28.72■■■□□ 2.19
Rab1b-201ENSMUST00000025804 Rapgef2Q8CHG7 1496 aa28.69■■■□□ 2.18
Rab1b-201ENSMUST00000025804 PtprkP35822 1457 aa28.66■■■□□ 2.18
Rab1b-201ENSMUST00000025804 Shroom4Q1W617 1475 aa28.66■■■□□ 2.18
Rab1b-201ENSMUST00000025804 Npm2Q80W85 207 aa28.64■■■□□ 2.17
Rab1b-201ENSMUST00000025804 Duox2A2AQ99 1517 aa28.62■■■□□ 2.17
Rab1b-201ENSMUST00000025804 Crocc2F6XLV1 1638 aa28.61■■■□□ 2.17
Rab1b-201ENSMUST00000025804 Plb1Q3TTY0 1478 aa28.61■■■□□ 2.17
Rab1b-201ENSMUST00000025804 Urb2E9Q7L1 1524 aaKnown RBP28.6■■■□□ 2.17
Rab1b-201ENSMUST00000025804 Efcab5A0JP43 1406 aa28.55■■■□□ 2.16
Rab1b-201ENSMUST00000025804 Cep162Q6ZQ06 1403 aa28.48■■■□□ 2.15
Rab1b-201ENSMUST00000025804 Samd9lQ69Z37 1561 aa28.44■■■□□ 2.14
Rab1b-201ENSMUST00000025804 Eif4g1Q6NZJ6 1600 aaKnown RBP28.39■■■□□ 2.14
Rab1b-201ENSMUST00000025804 Zeb1Q64318 1117 aa28.38■■■□□ 2.13
Rab1b-201ENSMUST00000025804 Arhgap35Q91YM2 1499 aa28.36■■■□□ 2.13
Rab1b-201ENSMUST00000025804 Ift140E9PY46 1464 aa28.31■■■□□ 2.12
Rab1b-201ENSMUST00000025804 Myt1lP97500 1187 aa28.31■■■□□ 2.12
Rab1b-201ENSMUST00000025804 Eif4g3Q80XI3 1579 aaKnown RBP28.31■■■□□ 2.12
Rab1b-201ENSMUST00000025804 Mroh2bQ7M6Y6 1581 aa28.3■■■□□ 2.12
Rab1b-201ENSMUST00000025804 Disp1Q3TDN0 1521 aa28.29■■■□□ 2.12
Rab1b-201ENSMUST00000025804 Map3k1P53349 1493 aa28.27■■■□□ 2.12
Rab1b-201ENSMUST00000025804 Rad54l2Q99NG0 1466 aa28.25■■■□□ 2.11
Rab1b-201ENSMUST00000025804 SynmQ70IV5 1561 aa28.23■■■□□ 2.11
Rab1b-201ENSMUST00000025804 AqrQ8CFQ3 1481 aaKnown RBP28.12■■■□□ 2.09
Rab1b-201ENSMUST00000025804 Magi3Q9EQJ9 1476 aa28.11■■■□□ 2.09
Rab1b-201ENSMUST00000025804 Nup160Q9Z0W3 1402 aaKnown RBP28.1■■■□□ 2.09
Rab1b-201ENSMUST00000025804 Clip1Q922J3 1391 aa28.1■■■□□ 2.09
Rab1b-201ENSMUST00000025804 Grin2aP35436 1464 aa28.08■■■□□ 2.08
Rab1b-201ENSMUST00000025804 Setd1bQ8CFT2 1985 aa28.07■■■□□ 2.08
Rab1b-201ENSMUST00000025804 Rusc2Q80U22 1514 aa28.07■■■□□ 2.08
Rab1b-201ENSMUST00000025804 Carmil1Q6EDY6 1374 aa28.06■■■□□ 2.08
Rab1b-201ENSMUST00000025804 Pbrm1Q8BSQ9 1634 aaKnown RBP28.06■■■□□ 2.08
Rab1b-201ENSMUST00000025804 Pla2r1Q62028 1487 aa28.05■■■□□ 2.08
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms