RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Gm9508A0A1W2P7W0 230 aa10.36□□□□□ -0.75
Ubp1-206ENSMUST00000216558 NrepQ07475 68 aa10.36□□□□□ -0.75
Ubp1-206ENSMUST00000216558 Gm17509Q9CZ61 145 aa10.36□□□□□ -0.75
Ubp1-206ENSMUST00000216558 Cox7b2Q9D2H1 82 aa10.36□□□□□ -0.75
Ubp1-206ENSMUST00000216558 Cox8cA6H666 72 aa10.35□□□□□ -0.75
Ubp1-206ENSMUST00000216558 4930556J24RikQ9D4U7 146 aa10.35□□□□□ -0.75
Ubp1-206ENSMUST00000216558 Igkv4-92A0A0B4J1I2 117 aa10.34□□□□□ -0.75
Ubp1-206ENSMUST00000216558 MrapQ9D159 127 aa10.34□□□□□ -0.75
Ubp1-206ENSMUST00000216558 Gm28269A0A087WSG3 125 aa10.33□□□□□ -0.76
Ubp1-206ENSMUST00000216558 9430015G10RikA2ASP7 199 aa10.33□□□□□ -0.76
Ubp1-206ENSMUST00000216558 SelenowP63300 88 aa10.33□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Defb47Q30KN1 79 aa10.33□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Pkd1l1Q8R526 2615 aa10.33□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Sprr4Q8CGN8 76 aa10.33□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Phpt1Q9DAK9 124 aa10.32□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Stab2Q8R4U0 2559 aa10.31□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Megf8P60882 2789 aa10.31□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Muc6Q80T03 2850 aa10.31□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Trav13-2A0A075B649 110 aa10.31□□□□□ -0.76
Ubp1-206ENSMUST00000216558 A730009L09RikA0A1B0GS82 72 aa10.31□□□□□ -0.76
Ubp1-206ENSMUST00000216558 CenpwQ3URR0 86 aa10.31□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Gm26920S4R2A5 56 aa10.31□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Igkv8-16A0A0G2JDG9 121 aa10.3□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Igkv1-117A0A140T8M0 119 aa10.3□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Gm10251J3QPM5 127 aa10.3□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Hint1P70349 126 aaKnown RBP10.3□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Csdc2Q91YQ3 154 aa10.3□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Hrct1Q9D6B9 109 aa10.3□□□□□ -0.76
Ubp1-206ENSMUST00000216558 MifP34884 115 aaKnown RBP10.29□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Rpl28P41105 137 aaKnown RBP10.29□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Pglyrp4Q0VB07 374 aa10.29□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Gm10518F6UQQ9 182 aa10.29□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Tenm2Q9WTS5 2764 aa10.29□□□□□ -0.76
Ubp1-206ENSMUST00000216558 PrkdcP97313 4128 aa10.28□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Fras1Q80T14 4010 aa10.28□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Igkv8-18A0A0B4J1J3 123 aa10.28□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Gm10135F6TEE5 83 aa10.28□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Hbb-b2P02089 147 aa10.28□□□□□ -0.76
Ubp1-206ENSMUST00000216558 Gm29423A0A087WRM1 55 aa10.27□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Cox7bP56393 80 aa10.27□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Camk2n2Q78WH7 79 aa10.27□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Wfdc12Q9JHY3 85 aa10.27□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Trav14-1A0A0G2JF94 121 aa10.26□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Try10Q792Z1 246 aaKnown RBP10.26□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Ube2d4D3YUH6 135 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Gm5153P01627 120 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 P01819 144 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Cox6cQ9CPQ1 76 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Ufsp1Q9CZP0 217 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Gm10845Q3UNY9 185 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Ube2wQ8VDW4 151 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Reg3dQ9QUS9 175 aa10.25□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Gm17577J3QNF7 156 aa10.24□□□□□ -0.77
Ubp1-206ENSMUST00000216558 CnbpP53996 178 aaKnown RBP10.24□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Igkv3-12A0A140T8P0 119 aa10.23□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Sprr1aQ62266 144 aa10.23□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Lgals4Q8K419 326 aa10.23□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Pxt1Q8K459 51 aa10.22□□□□□ -0.77
Ubp1-206ENSMUST00000216558 AY074887Q8R5F9 132 aa10.22□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Defa16P50714 93 aa10.22□□□□□ -0.77
Ubp1-206ENSMUST00000216558 PlecQ9QXS1 4691 aaKnown RBP10.21□□□□□ -0.77
Ubp1-206ENSMUST00000216558 Smim26Q3V460 107 aa10.21□□□□□ -0.78
Ubp1-206ENSMUST00000216558 A0A286YCN5 57 aa10.2□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Vps25Q9CQ80 176 aa10.19□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Ociad2Q9D8W7 154 aa10.19□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Dnal4Q9DCM4 105 aa10.18□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Gm16381A0A1Y7VKT9 73 aa10.18□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Gm5142Q8C5X9 133 aa10.18□□□□□ -0.78
Ubp1-206ENSMUST00000216558 4930519P11RikQ9CUJ8 166 aa10.18□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Gm11627A6PWP4 55 aa10.17□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Defa1P11477 93 aa10.17□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Gm10735Q3US96 136 aa10.17□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Gm9918Q8BUR5 174 aa10.17□□□□□ -0.78
Ubp1-206ENSMUST00000216558 BaalcQ8VHV1 145 aa10.17□□□□□ -0.78
Ubp1-206ENSMUST00000216558 FasnP19096 2504 aaKnown RBP10.16□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Defb29Q8BGW9 78 aa10.16□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Rpl18aP62717 176 aaKnown RBP10.15□□□□□ -0.78
Ubp1-206ENSMUST00000216558 BB014433Q8C5R5 389 aa10.15□□□□□ -0.78
Ubp1-206ENSMUST00000216558 Mrpl52Q9D0Y8 121 aa10.15□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Trav3-4A0A075B654 114 aa10.14□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Defb40Q70KL2 73 aa10.14□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Trav13n-2A0A0G2JF93 110 aa10.13□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Gm9507D3Z5T3 223 aa10.13□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Gm10770F7D043 238 aa10.13□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Dnah11E9Q7N9 4488 aa10.12□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Gm45213A0A0U1RNZ6 101 aa10.12□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Gm9805F6YK59 57 aa10.12□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Cited1P97769 203 aa10.11□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Acyp1P56376 99 aa10.11□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Pou2af1Q64693 256 aa10.11□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Cdk2ap2Q9CPY4 127 aa10.11□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Gtf2h5Q8K2X8 71 aa10.1□□□□□ -0.79
Ubp1-206ENSMUST00000216558 4930524J08RikQ9CUJ5 163 aa10.1□□□□□ -0.79
Ubp1-206ENSMUST00000216558 1700020N15RikL7MTX3 112 aa10.09□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Defa20Q45VN2 95 aa10.09□□□□□ -0.79
Ubp1-206ENSMUST00000216558 Igkv1-35A0A0G2JDE5 120 aa10.08□□□□□ -0.8
Ubp1-206ENSMUST00000216558 BC048502Q80Y74 154 aa10.08□□□□□ -0.8
Ubp1-206ENSMUST00000216558 Dnah9B1AR51 4484 aa10.08□□□□□ -0.8
Ubp1-206ENSMUST00000216558 Igkv1-88A0A140T8N1 120 aa10.07□□□□□ -0.8
Ubp1-206ENSMUST00000216558 Wfdc6bF6ULY1 148 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms