RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 B9d2Q3UK10 175 aa9.97□□□□□ -0.81
Nup88-202ENSMUST00000108530 Stab2Q8R4U0 2559 aa9.97□□□□□ -0.81
Nup88-202ENSMUST00000108530 Ighv2-9-1A0A075B697 116 aa9.97□□□□□ -0.81
Nup88-202ENSMUST00000108530 CenpwQ3URR0 86 aa9.97□□□□□ -0.81
Nup88-202ENSMUST00000108530 Ly6hQ9WUC3 139 aa9.97□□□□□ -0.81
Nup88-202ENSMUST00000108530 Megf8P60882 2789 aa9.97□□□□□ -0.81
Nup88-202ENSMUST00000108530 Gm11213A0A1B0GR83 88 aa9.96□□□□□ -0.82
Nup88-202ENSMUST00000108530 Ube2wQ8VDW4 151 aa9.96□□□□□ -0.82
Nup88-202ENSMUST00000108530 MrapQ9D159 127 aa9.96□□□□□ -0.82
Nup88-202ENSMUST00000108530 C530025M09RikF6RGA8 229 aa9.95□□□□□ -0.82
Nup88-202ENSMUST00000108530 Wdr38Q9D994 303 aa9.95□□□□□ -0.82
Nup88-202ENSMUST00000108530 Muc6Q80T03 2850 aa9.95□□□□□ -0.82
Nup88-202ENSMUST00000108530 Lst1O08843 95 aa9.94□□□□□ -0.82
Nup88-202ENSMUST00000108530 Tmem86bQ497J1 226 aa9.94□□□□□ -0.82
Nup88-202ENSMUST00000108530 Igkv8-24A0A140T8P5 121 aa9.94□□□□□ -0.82
Nup88-202ENSMUST00000108530 Gm3618D3Z4P5 127 aa9.93□□□□□ -0.82
Nup88-202ENSMUST00000108530 Gm2916Q9D9B9 127 aa9.93□□□□□ -0.82
Nup88-202ENSMUST00000108530 Trav13-2A0A075B649 110 aa9.93□□□□□ -0.82
Nup88-202ENSMUST00000108530 Gm10577Q3UDV9 132 aa9.93□□□□□ -0.82
Nup88-202ENSMUST00000108530 Dnah1E9Q8T7 4250 aa9.92□□□□□ -0.82
Nup88-202ENSMUST00000108530 Ighv1-56A0A0A6YXG2 117 aa9.92□□□□□ -0.82
Nup88-202ENSMUST00000108530 Tenm2Q9WTS5 2764 aa9.92□□□□□ -0.82
Nup88-202ENSMUST00000108530 Huwe1Q7TMY8 4377 aaKnown RBP9.91□□□□□ -0.82
Nup88-202ENSMUST00000108530 Wfdc12Q9JHY3 85 aa9.91□□□□□ -0.82
Nup88-202ENSMUST00000108530 MalO09198 153 aa9.9□□□□□ -0.82
Nup88-202ENSMUST00000108530 MifP34884 115 aaKnown RBP9.9□□□□□ -0.82
Nup88-202ENSMUST00000108530 Ndufa12Q7TMF3 145 aaKnown RBP9.89□□□□□ -0.83
Nup88-202ENSMUST00000108530 SelenowP63300 88 aa9.88□□□□□ -0.83
Nup88-202ENSMUST00000108530 Cops9Q3U898 57 aa9.88□□□□□ -0.83
Nup88-202ENSMUST00000108530 Cox6cQ9CPQ1 76 aa9.88□□□□□ -0.83
Nup88-202ENSMUST00000108530 FasnP19096 2504 aaKnown RBP9.88□□□□□ -0.83
Nup88-202ENSMUST00000108530 Igkv1-117A0A140T8M0 119 aa9.88□□□□□ -0.83
Nup88-202ENSMUST00000108530 Phpt1Q9DAK9 124 aa9.87□□□□□ -0.83
Nup88-202ENSMUST00000108530 Gm4707V9GXN5 68 aa9.87□□□□□ -0.83
Nup88-202ENSMUST00000108530 Pglyrp4Q0VB07 374 aa9.87□□□□□ -0.83
Nup88-202ENSMUST00000108530 Igkv8-16A0A0G2JDG9 121 aa9.86□□□□□ -0.83
Nup88-202ENSMUST00000108530 A0A286YCN5 57 aa9.86□□□□□ -0.83
Nup88-202ENSMUST00000108530 Lage3Q9CR70 148 aa9.86□□□□□ -0.83
Nup88-202ENSMUST00000108530 Mzt1Q8BUR9 78 aa9.85□□□□□ -0.83
Nup88-202ENSMUST00000108530 Defa20Q45VN2 95 aa9.85□□□□□ -0.83
Nup88-202ENSMUST00000108530 Gm16485Q8C4B7 115 aa9.85□□□□□ -0.83
Nup88-202ENSMUST00000108530 A730009L09RikA0A1B0GS82 72 aa9.84□□□□□ -0.83
Nup88-202ENSMUST00000108530 Gm10518F6UQQ9 182 aa9.84□□□□□ -0.83
Nup88-202ENSMUST00000108530 TeppQ6IMH0 216 aa9.84□□□□□ -0.83
Nup88-202ENSMUST00000108530 Xlr5cQ9JJR2 179 aa9.84□□□□□ -0.83
Nup88-202ENSMUST00000108530 PrkdcP97313 4128 aa9.83□□□□□ -0.84
Nup88-202ENSMUST00000108530 Gm867A0A1W2P7T4 151 aa9.83□□□□□ -0.84
Nup88-202ENSMUST00000108530 Defb29Q8BGW9 78 aa9.82□□□□□ -0.84
Nup88-202ENSMUST00000108530 Gm10549Q3URY4 149 aa9.82□□□□□ -0.84
Nup88-202ENSMUST00000108530 Tmem213Q08EA8 116 aa9.81□□□□□ -0.84
Nup88-202ENSMUST00000108530 Defa1P11477 93 aa9.81□□□□□ -0.84
Nup88-202ENSMUST00000108530 Ighv2-9A0A075B5Q5 116 aa9.8□□□□□ -0.84
Nup88-202ENSMUST00000108530 Cox7b2Q9D2H1 82 aa9.8□□□□□ -0.84
Nup88-202ENSMUST00000108530 Trav3-4A0A075B654 114 aa9.8□□□□□ -0.84
Nup88-202ENSMUST00000108530 Reg3dQ9QUS9 175 aa9.8□□□□□ -0.84
Nup88-202ENSMUST00000108530 Trav13n-2A0A0G2JF93 110 aa9.79□□□□□ -0.84
Nup88-202ENSMUST00000108530 Dync2h1Q45VK7 4306 aa9.79□□□□□ -0.84
Nup88-202ENSMUST00000108530 Defa16P50714 93 aa9.78□□□□□ -0.84
Nup88-202ENSMUST00000108530 PkigO70139 76 aa9.78□□□□□ -0.84
Nup88-202ENSMUST00000108530 Igkv8-18A0A0B4J1J3 123 aa9.77□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm10735Q3US96 136 aa9.77□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm17509Q9CZ61 145 aa9.77□□□□□ -0.85
Nup88-202ENSMUST00000108530 Ufsp1Q9CZP0 217 aa9.77□□□□□ -0.85
Nup88-202ENSMUST00000108530 2310061N02RikQ9D6S9 174 aa9.77□□□□□ -0.85
Nup88-202ENSMUST00000108530 Trav14d-3-dv8A0A075B619 120 aa9.77□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm10845Q3UNY9 185 aa9.77□□□□□ -0.85
Nup88-202ENSMUST00000108530 Igkv1-35A0A0G2JDE5 120 aa9.76□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm28539A0A087WSL9 92 aa9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 Igkv4-92A0A0B4J1I2 117 aa9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 Rpl28P41105 137 aaKnown RBP9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 Camk2n2Q78WH7 79 aa9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 Sprr4Q8CGN8 76 aa9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 Smim20D3Z7Q2 69 aa9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 Atp5eP56382 52 aa9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 4930556J24RikQ9D4U7 146 aa9.75□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm5153P01627 120 aa9.74□□□□□ -0.85
Nup88-202ENSMUST00000108530 9430015G10RikA2ASP7 199 aa9.74□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm9507D3Z5T3 223 aa9.74□□□□□ -0.85
Nup88-202ENSMUST00000108530 1810062G17RikG3X8Y2 129 aa9.73□□□□□ -0.85
Nup88-202ENSMUST00000108530 5730596B20RikQ8BQ08 205 aa9.73□□□□□ -0.85
Nup88-202ENSMUST00000108530 Rpl18aP62717 176 aaKnown RBP9.73□□□□□ -0.85
Nup88-202ENSMUST00000108530 Ube2d4D3YUH6 135 aa9.72□□□□□ -0.85
Nup88-202ENSMUST00000108530 AW011738F6S7Q2 159 aa9.72□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm9903Q8C9Y8 129 aa9.72□□□□□ -0.85
Nup88-202ENSMUST00000108530 Tcl1b5P56845 121 aa9.72□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm5142Q8C5X9 133 aa9.72□□□□□ -0.85
Nup88-202ENSMUST00000108530 Hbb-b2P02089 147 aa9.71□□□□□ -0.85
Nup88-202ENSMUST00000108530 Gm5617Q91VN2 117 aa9.71□□□□□ -0.85
Nup88-202ENSMUST00000108530 Fras1Q80T14 4010 aa9.71□□□□□ -0.86
Nup88-202ENSMUST00000108530 Dnal4Q9DCM4 105 aa9.71□□□□□ -0.86
Nup88-202ENSMUST00000108530 Igkv1-88A0A140T8N1 120 aa9.7□□□□□ -0.86
Nup88-202ENSMUST00000108530 Cox7bP56393 80 aa9.7□□□□□ -0.86
Nup88-202ENSMUST00000108530 Tcl1b3P56842 122 aa9.7□□□□□ -0.86
Nup88-202ENSMUST00000108530 Defb11Q8R2I7 77 aa9.7□□□□□ -0.86
Nup88-202ENSMUST00000108530 TgO08710 2766 aa9.69□□□□□ -0.86
Nup88-202ENSMUST00000108530 Klk12B2RVZ0 247 aa9.69□□□□□ -0.86
Nup88-202ENSMUST00000108530 AY074887Q8R5F9 132 aa9.69□□□□□ -0.86
Nup88-202ENSMUST00000108530 Trav14-1A0A0G2JF94 121 aa9.68□□□□□ -0.86
Nup88-202ENSMUST00000108530 Apoc4Q61268 124 aa9.67□□□□□ -0.86
Nup88-202ENSMUST00000108530 PlecQ9QXS1 4691 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 64.1 ms